; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017548 (gene) of Snake gourd v1 genome

Gene IDTan0017548
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:14815263..14816303
RNA-Seq ExpressionTan0017548
SyntenyTan0017548
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.4e-0434.26Show/hide
Query:  MEGPMSGVMVTIKYEKLPEFCSHCGVISHHFKDCNLFYKNASKSCR-FHQYGQQLRYTG-----RSHQIAKSPSSADSWKSRGSEGRVSTTQGTPMVISP
        ++GPM G  + I+YE+LP+FC  CGVI H   DC+  Y  A    R   +YG  LR+ G     +  +  KSP+  DS  S     +    + T   +  
Subjt:  MEGPMSGVMVTIKYEKLPEFCSHCGVISHHFKDCNLFYKNASKSCR-FHQYGQQLRYTG-----RSHQIAKSPSSADSWKSRGSEGRVSTTQGTPMVISP

Query:  SQIPKQDG
        S+   QDG
Subjt:  SQIPKQDG
TrEMBL top hitse value%identityAlignment
A0A6J1DU55 uncharacterized protein LOC1110231356.7e-0534.26Show/hide
Query:  MEGPMSGVMVTIKYEKLPEFCSHCGVISHHFKDCNLFYKNASKSCR-FHQYGQQLRYTG-----RSHQIAKSPSSADSWKSRGSEGRVSTTQGTPMVISP
        ++GPM G  + I+YE+LP+FC  CGVI H   DC+  Y  A    R   +YG  LR+ G     +  +  KSP+  DS  S     +    + T   +  
Subjt:  MEGPMSGVMVTIKYEKLPEFCSHCGVISHHFKDCNLFYKNASKSCR-FHQYGQQLRYTG-----RSHQIAKSPSSADSWKSRGSEGRVSTTQGTPMVISP

Query:  SQIPKQDG
        S+   QDG
Subjt:  SQIPKQDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGCCCTATGAGTGGAGTGATGGTAACTATCAAATACGAAAAATTACCTGAATTCTGCTCACATTGTGGGGTAATTAGTCATCATTTCAAAGATTGCAATTTGTT
CTACAAAAATGCATCCAAATCCTGTAGATTCCATCAGTACGGCCAACAACTGAGATACACTGGTCGTTCCCATCAGATTGCGAAATCTCCTAGTTCGGCCGATTCATGGA
AAAGCCGTGGTTCGGAGGGTAGGGTTTCTACGACTCAAGGAACTCCGATGGTTATTTCCCCTTCGCAGATTCCCAAGCAAGACGGAGGTTTCCACCTTGGTCGGACAACG
AGGGTCGGAGCGGATTGCTCTCCGGCGACTACACCGAAGACATTTAATTCCCTAATGGACGTTTCCCTTGCATTGAAGTCCAGCGAGATCTTAGGAGCGGCGGAAGGGGG
AGAGTTGAAACGGCAGGAAGCAAATTGCGCGAGGAAATTAATTTTTGATGGCGAAACATTAGGGACGCTAGCAGGATCGATTGGTTTAGGGGAGTTAGAGGGCTTGGTTC
GTGAGCCGACTATTCATGGGGCTAAGACACCACCCACCGATTTCCAAGGGAGTTATTCTTCTCAAGATATGGCCCAAAAGGTGAACAAGGAGTTAGGCCTTGCCCCGGTA
CCTTACACTTTTGGGAAGGTTCGTCCCCCGTTTCTGAATCCGGACACTGACGCGGTTTCCCAAGGGAACAAATGCAAGGTGGATGTTCCTATTGAGGCCTCTAATAAGCG
ATCCATGTCTAACCTGAACCATTCCAATGGCGTTCGGGAGTCCACTGAAGTGGCGGAGGTTGTGGAGAAGCCTCGCCACCAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGCCCTATGAGTGGAGTGATGGTAACTATCAAATACGAAAAATTACCTGAATTCTGCTCACATTGTGGGGTAATTAGTCATCATTTCAAAGATTGCAATTTGTT
CTACAAAAATGCATCCAAATCCTGTAGATTCCATCAGTACGGCCAACAACTGAGATACACTGGTCGTTCCCATCAGATTGCGAAATCTCCTAGTTCGGCCGATTCATGGA
AAAGCCGTGGTTCGGAGGGTAGGGTTTCTACGACTCAAGGAACTCCGATGGTTATTTCCCCTTCGCAGATTCCCAAGCAAGACGGAGGTTTCCACCTTGGTCGGACAACG
AGGGTCGGAGCGGATTGCTCTCCGGCGACTACACCGAAGACATTTAATTCCCTAATGGACGTTTCCCTTGCATTGAAGTCCAGCGAGATCTTAGGAGCGGCGGAAGGGGG
AGAGTTGAAACGGCAGGAAGCAAATTGCGCGAGGAAATTAATTTTTGATGGCGAAACATTAGGGACGCTAGCAGGATCGATTGGTTTAGGGGAGTTAGAGGGCTTGGTTC
GTGAGCCGACTATTCATGGGGCTAAGACACCACCCACCGATTTCCAAGGGAGTTATTCTTCTCAAGATATGGCCCAAAAGGTGAACAAGGAGTTAGGCCTTGCCCCGGTA
CCTTACACTTTTGGGAAGGTTCGTCCCCCGTTTCTGAATCCGGACACTGACGCGGTTTCCCAAGGGAACAAATGCAAGGTGGATGTTCCTATTGAGGCCTCTAATAAGCG
ATCCATGTCTAACCTGAACCATTCCAATGGCGTTCGGGAGTCCACTGAAGTGGCGGAGGTTGTGGAGAAGCCTCGCCACCAGCCATGA
Protein sequenceShow/hide protein sequence
MEGPMSGVMVTIKYEKLPEFCSHCGVISHHFKDCNLFYKNASKSCRFHQYGQQLRYTGRSHQIAKSPSSADSWKSRGSEGRVSTTQGTPMVISPSQIPKQDGGFHLGRTT
RVGADCSPATTPKTFNSLMDVSLALKSSEILGAAEGGELKRQEANCARKLIFDGETLGTLAGSIGLGELEGLVREPTIHGAKTPPTDFQGSYSSQDMAQKVNKELGLAPV
PYTFGKVRPPFLNPDTDAVSQGNKCKVDVPIEASNKRSMSNLNHSNGVRESTEVAEVVEKPRHQP