; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017553 (gene) of Snake gourd v1 genome

Gene IDTan0017553
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein RALF-like 17
Genome locationLG02:1189343..1189723
RNA-Seq ExpressionTan0017553
SyntenyTan0017553
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061659.1 hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa]1.7e-3461.72Show/hide
Query:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSL----NDKNDDDDFDDTYKVVGKVSISLSTSESTDA
        MGISK +SF+C++AI +S    KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQH+G I+S+    ND +DDD+FDD YKVVGK+S+S+S       
Subjt:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSL----NDKNDDDDFDDTYKVVGKVSISLSTSESTDA

Query:  AVEQADDLGMEKVLPEEQITDRVTVLGH
        A +QAD L +  + P++Q+++ V VLGH
Subjt:  AVEQADDLGMEKVLPEEQITDRVTVLGH

KAE8647343.1 hypothetical protein Csa_003811 [Cucumis sativus]3.8e-3166.67Show/hide
Query:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSL--NDKNDDDDFDDTYKVVGKVSISLSTSESTDAAV
        MGISKG+SF+C++AI    L  KVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQH+G I+S+  N+ +DDD+FDDTYKVVGK+S SL    S +AA 
Subjt:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSL--NDKNDDDDFDDTYKVVGKVSISLSTSESTDAAV

Query:  EQADDLGMEKV
        ++AD L +E +
Subjt:  EQADDLGMEKV

KAG6572424.1 hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia]7.2e-3868.38Show/hide
Query:  LCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSLN--DKNDDDDFDDTYKVVGKVSISLSTSESTDAAVEQADDLGME
        +C +AIFIS LFIK+A AD  HFGIHA+GHAVEPFCPGGYSDRGDHC HIG ITS+N  + +DDDDFDDTYKV+GK+S+++S SESTD A ++A  L +E
Subjt:  LCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSLN--DKNDDDDFDDTYKVVGKVSISLSTSESTDAAVEQADDLGME

Query:  KVLPEEQITDRVTVLGH
         + PEEQ++D+VTVLGH
Subjt:  KVLPEEQITDRVTVLGH

KAG6589281.1 hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1951.61Show/hide
Query:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSLNDKNDDDDFDDTYKVVGKVSISLSTSESTDAAVEQ
        M ISKG+SFL LVAIFI  LFI+VADA S H G     HAVE  CPGG    G+HC H G + +    ++DDDFDDTYK   K  +++S SEST+ A E+
Subjt:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSLNDKNDDDDFDDTYKVVGKVSISLSTSESTDAAVEQ

Query:  ADDLGMEKVLPEEQITDRVTVLGH
        A ++ +E   PEE    +V VLGH
Subjt:  ADDLGMEKVLPEEQITDRVTVLGH

PON44611.1 hypothetical protein TorRG33x02_330420 [Trema orientale]1.5e-0640.15Show/hide
Query:  MGISKG-VSFLCLVAIFISSL-FIKVADADSDHFG-IHAVGHAVEPFCPGGY-SDRGDHCQHIGHITSLNDKNDDDDF----DDTYKVVGKVSISLSTSE
        M +S+G V F CL  + +  L FI  A+AD  H   IHAV H     C GG  S++GD CQ        ND +DDDD     DDTYK+V  V +SLS++ 
Subjt:  MGISKG-VSFLCLVAIFISSL-FIKVADADSDHFG-IHAVGHAVEPFCPGGY-SDRGDHCQHIGHITSLNDKNDDDDF----DDTYKVVGKVSISLSTSE

Query:  STDAAVEQADDLGMEKVLPEEQITDRVTVLGH
            A    DD   E  +  ++I + V VLGH
Subjt:  STDAAVEQADDLGMEKVLPEEQITDRVTVLGH

TrEMBL top hitse value%identityAlignment
A0A0A0KE60 Uncharacterized protein1.5e-3361.9Show/hide
Query:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSL--NDKNDDDDFDDTYKVVGKVSISLSTSESTDAAV
        MGISKG+SF+C++AI    L  KVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQH+G I+S+  N+ +DDD+FDDTYKVVGK+S SL    S +AA 
Subjt:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSL--NDKNDDDDFDDTYKVVGKVSISLSTSESTDAAV

Query:  EQADDLGMEKVLPEEQITDRVTVLGH
        ++AD L +    P ++++ +  VLGH
Subjt:  EQADDLGMEKVLPEEQITDRVTVLGH

A0A2N9FLD3 Uncharacterized protein5.4e-0736.92Show/hide
Query:  MGISKGVSFLCLVAIFISSLFIKVADAD-SDHFG-IHAVGHAVEPFCPGGYSDRGDHCQHIGHITSLNDKND----DDDFDDTYKVVGKVSISLSTSEST
        M IS+ V    L  + +  L IKV++AD SDH+  IH + H     C G + + GD C+        ND +D    DDD DDTYKVV K+S+S S S   
Subjt:  MGISKGVSFLCLVAIFISSLFIKVADAD-SDHFG-IHAVGHAVEPFCPGGYSDRGDHCQHIGHITSLNDKND----DDDFDDTYKVVGKVSISLSTSEST

Query:  DAAVEQADDLGMEKVLPEEQITDRVTVLGH
         ++ E  D    +    EE++ + + VLGH
Subjt:  DAAVEQADDLGMEKVLPEEQITDRVTVLGH

A0A2P5B771 Uncharacterized protein7.1e-0740.15Show/hide
Query:  MGISKG-VSFLCLVAIFISSL-FIKVADADSDHFG-IHAVGHAVEPFCPGGY-SDRGDHCQHIGHITSLNDKNDDDDF----DDTYKVVGKVSISLSTSE
        M +S+G V F CL  + +  L FI  A+AD  H   IHAV H     C GG  S++GD CQ        ND +DDDD     DDTYK+V  V +SLS++ 
Subjt:  MGISKG-VSFLCLVAIFISSL-FIKVADADSDHFG-IHAVGHAVEPFCPGGY-SDRGDHCQHIGHITSLNDKNDDDDF----DDTYKVVGKVSISLSTSE

Query:  STDAAVEQADDLGMEKVLPEEQITDRVTVLGH
            A    DD   E  +  ++I + V VLGH
Subjt:  STDAAVEQADDLGMEKVLPEEQITDRVTVLGH

A0A2P5BI74 Uncharacterized protein4.6e-0640.6Show/hide
Query:  MGISKG-VSFLCLVAIFISSL-FIKVADADSDHFG--IHAVGHAVEPFCPGGY-SDRGDHCQHIGHITSLNDKNDDDDF----DDTYKVVGKVSISLSTS
        M +S+G V F CL  + +  L FI  A+AD DH    IHAV H     C GG  S++GD CQ        ND +DDDD     DDTYK+V  V +SLS++
Subjt:  MGISKG-VSFLCLVAIFISSL-FIKVADADSDHFG--IHAVGHAVEPFCPGGY-SDRGDHCQHIGHITSLNDKNDDDDF----DDTYKVVGKVSISLSTS

Query:  ESTDAAVEQADDLGMEKVLPEEQITDRVTVLGH
             A    DD   E  +  ++I + V VLGH
Subjt:  ESTDAAVEQADDLGMEKVLPEEQITDRVTVLGH

A0A5A7V7L4 Uncharacterized protein8.0e-3561.72Show/hide
Query:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSL----NDKNDDDDFDDTYKVVGKVSISLSTSESTDA
        MGISK +SF+C++AI +S    KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQH+G I+S+    ND +DDD+FDD YKVVGK+S+S+S       
Subjt:  MGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSL----NDKNDDDDFDDTYKVVGKVSISLSTSESTDA

Query:  AVEQADDLGMEKVLPEEQITDRVTVLGH
        A +QAD L +  + P++Q+++ V VLGH
Subjt:  AVEQADDLGMEKVLPEEQITDRVTVLGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGGAATTTCAAAAGGAGTGTCATTTCTATGCCTTGTCGCCATCTTCATTTCCTCACTTTTCATCAAAGTCGCCGACGCCGATTCCGACCACTTCGGCATCCA
CGCCGTCGGACACGCCGTCGAGCCGTTCTGCCCCGGCGGCTACTCCGATAGAGGGGACCACTGCCAGCACATCGGCCACATCACCTCACTAAACGACAAGAATGACGATG
ACGATTTTGATGACACGTATAAAGTTGTGGGCAAGGTTTCGATATCCTTGTCCACGTCGGAATCCACCGATGCCGCCGTAGAACAGGCGGATGATTTGGGCATGGAGAAA
GTTTTACCTGAAGAACAAATTACCGATAGAGTCACTGTCTTGGGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGGAATTTCAAAAGGAGTGTCATTTCTATGCCTTGTCGCCATCTTCATTTCCTCACTTTTCATCAAAGTCGCCGACGCCGATTCCGACCACTTCGGCATCCA
CGCCGTCGGACACGCCGTCGAGCCGTTCTGCCCCGGCGGCTACTCCGATAGAGGGGACCACTGCCAGCACATCGGCCACATCACCTCACTAAACGACAAGAATGACGATG
ACGATTTTGATGACACGTATAAAGTTGTGGGCAAGGTTTCGATATCCTTGTCCACGTCGGAATCCACCGATGCCGCCGTAGAACAGGCGGATGATTTGGGCATGGAGAAA
GTTTTACCTGAAGAACAAATTACCGATAGAGTCACTGTCTTGGGGCATTGA
Protein sequenceShow/hide protein sequence
MAMGISKGVSFLCLVAIFISSLFIKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGHITSLNDKNDDDDFDDTYKVVGKVSISLSTSESTDAAVEQADDLGMEK
VLPEEQITDRVTVLGH