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Tan0017575 (gene) of Snake gourd v1 genome

Gene IDTan0017575
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:7697318..7698823
RNA-Seq ExpressionTan0017575
SyntenyTan0017575
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138679.1 uncharacterized protein LOC101205088 [Cucumis sativus]2.8e-5081.6Show/hide
Query:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW
        D++ PKSPF WFSFLPKFDFRLPFP+N  KKPP  VVDE+RK ++DAQKPEFVRFP +ELPVASVE EADVSGKTSNPAV+WQVYALGGFLILSWAWARW
Subjt:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW

Query:  KERRPQRRSNDDDEGEGEDEDSRDT
        KERRPQRRSNDDD    EDEDS D+
Subjt:  KERRPQRRSNDDDEGEGEDEDSRDT

XP_008456569.1 PREDICTED: uncharacterized protein LOC103496485 [Cucumis melo]7.0e-4981.51Show/hide
Query:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW
        D++ PKSPF WFSFLPKFDFRLPFP+N  KK P  VVDE RK ++DAQKPEFVRFP +ELPVASVE EADVSGKTSNPAV+WQVYALGGFLILSWAWARW
Subjt:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW

Query:  KERRPQRRSNDDDEGEGED
        KERRPQRRSNDDDE +  D
Subjt:  KERRPQRRSNDDDEGEGED

XP_023550786.1 uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo]1.0e-4778.74Show/hide
Query:  MSDDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA
        M +D +PK PFTWFSFLPKFD RLP PIN  KKPPA V+DE  K +DDAQKPEFVRFP + L V SVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA
Subjt:  MSDDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA

Query:  RWKERRPQRRSNDDDEGEGEDEDSRDT
        RWKERRP+RRS+DDD    E+EDSRDT
Subjt:  RWKERRPQRRSNDDDEGEGEDEDSRDT

XP_023550789.1 uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo]1.0e-4778.74Show/hide
Query:  MSDDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA
        M +D +PK PFTWFSFLPKFD RLP PIN  KKPPA V+DE  K +DDAQKPEFVRFP + L V SVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA
Subjt:  MSDDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA

Query:  RWKERRPQRRSNDDDEGEGEDEDSRDT
        RWKERRP+RRS+DDD    E+EDSRDT
Subjt:  RWKERRPQRRSNDDDEGEGEDEDSRDT

XP_038886165.1 uncharacterized protein LOC120076415 [Benincasa hispida]4.1e-4983.87Show/hide
Query:  DDHTPKS--PFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA
        D+ +PKS  PF WFSFLPKFDFRLPFPIN  KKPPA VVDE RK +DDAQKPEFVRFP +ELPVASVE EADVSGKTSNPAVIWQVYALGGFLILSWAWA
Subjt:  DDHTPKS--PFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA

Query:  RWKERRPQRRSNDDDEGEGEDEDS
        RWKERRPQRRSNDD+    EDEDS
Subjt:  RWKERRPQRRSNDDDEGEGEDEDS

TrEMBL top hitse value%identityAlignment
A0A0A0LSR5 Uncharacterized protein1.4e-5081.6Show/hide
Query:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW
        D++ PKSPF WFSFLPKFDFRLPFP+N  KKPP  VVDE+RK ++DAQKPEFVRFP +ELPVASVE EADVSGKTSNPAV+WQVYALGGFLILSWAWARW
Subjt:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW

Query:  KERRPQRRSNDDDEGEGEDEDSRDT
        KERRPQRRSNDDD    EDEDS D+
Subjt:  KERRPQRRSNDDDEGEGEDEDSRDT

A0A1S3C3J3 uncharacterized protein LOC1034964853.4e-4981.51Show/hide
Query:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW
        D++ PKSPF WFSFLPKFDFRLPFP+N  KK P  VVDE RK ++DAQKPEFVRFP +ELPVASVE EADVSGKTSNPAV+WQVYALGGFLILSWAWARW
Subjt:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW

Query:  KERRPQRRSNDDDEGEGED
        KERRPQRRSNDDDE +  D
Subjt:  KERRPQRRSNDDDEGEGED

A0A5D3CKR2 Uncharacterized protein3.4e-4981.51Show/hide
Query:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW
        D++ PKSPF WFSFLPKFDFRLPFP+N  KK P  VVDE RK ++DAQKPEFVRFP +ELPVASVE EADVSGKTSNPAV+WQVYALGGFLILSWAWARW
Subjt:  DDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARW

Query:  KERRPQRRSNDDDEGEGED
        KERRPQRRSNDDDE +  D
Subjt:  KERRPQRRSNDDDEGEGED

A0A6J1FFF8 uncharacterized protein LOC1114449957.0e-4777.95Show/hide
Query:  MSDDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA
        M +D +PK PFTWFSFLPKFD RLP PIN  KKPPA V+DE  K +D AQKPEFVRFP + L V SVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA
Subjt:  MSDDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA

Query:  RWKERRPQRRSNDDDEGEGEDEDSRDT
        RWKERRP+RRS+DDD    E+EDSRDT
Subjt:  RWKERRPQRRSNDDDEGEGEDEDSRDT

A0A6J1JVP7 uncharacterized protein LOC1114892981.2e-4676.38Show/hide
Query:  MSDDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA
        + ++ +PK PFTWFSFLPKFD RLP PIN  KKPPA V+DE  K ++DAQKPEFVRFP + L V SVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA
Subjt:  MSDDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWA

Query:  RWKERRPQRRSNDDDEGEGEDEDSRDT
        RWKERRP+RRS+DDD    E+EDSRDT
Subjt:  RWKERRPQRRSNDDDEGEGEDEDSRDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52230.1 unknown protein8.6e-1340Show/hide
Query:  LPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQ----KPEFVRFP-NSELPVASVEVEAD-VSGKTSNPAVIWQVYALGGFLILSWAWARWKERR---P
        LP F   L F     K PPA +   A KP  + +      E V FP N       ++ EA+  SG+TSN  ++WQVYALGGFL+L WAWARW ER     
Subjt:  LPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQ----KPEFVRFP-NSELPVASVEVEAD-VSGKTSNPAVIWQVYALGGFLILSWAWARWKERR---P

Query:  QRRSNDDDEGEGEDEDSRDT
        ++ +  DD+ + +DED + +
Subjt:  QRRSNDDDEGEGEDEDSRDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGACGACCACACCCCAAAATCCCCTTTCACTTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTTTTCCGATCAACGACGCCAAGAAACCGCCTGCTCC
GGTTGTTGATGAAGCCCGAAAGCCCAACGACGACGCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAATTCAGAGTTGCCCGTCGCGTCCGTGGAGGTTGAAGCCGATGTCT
CCGGCAAGACTTCCAATCCGGCGGTTATCTGGCAGGTATATGCTCTTGGAGGGTTTCTAATTTTGAGTTGGGCGTGGGCAAGATGGAAGGAGAGAAGGCCACAAAGGCGT
TCGAATGATGACGATGAGGGCGAGGGCGAGGATGAGGATTCCCGGGATACATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGACGACCACACCCCAAAATCCCCTTTCACTTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTTTTCCGATCAACGACGCCAAGAAACCGCCTGCTCC
GGTTGTTGATGAAGCCCGAAAGCCCAACGACGACGCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAATTCAGAGTTGCCCGTCGCGTCCGTGGAGGTTGAAGCCGATGTCT
CCGGCAAGACTTCCAATCCGGCGGTTATCTGGCAGGTATATGCTCTTGGAGGGTTTCTAATTTTGAGTTGGGCGTGGGCAAGATGGAAGGAGAGAAGGCCACAAAGGCGT
TCGAATGATGACGATGAGGGCGAGGGCGAGGATGAGGATTCCCGGGATACATAG
Protein sequenceShow/hide protein sequence
MSDDHTPKSPFTWFSFLPKFDFRLPFPINDAKKPPAPVVDEARKPNDDAQKPEFVRFPNSELPVASVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPQRR
SNDDDEGEGEDEDSRDT