; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017608 (gene) of Snake gourd v1 genome

Gene IDTan0017608
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:72478359..72478999
RNA-Seq ExpressionTan0017608
SyntenyTan0017608
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572977.1 NF-X1-type zinc finger protein NFXL1, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2785.33Show/hide
Query:  MEDWKQSNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPIS
        MEDWK +NRENR  MEKIGT FPVHSQVRKIKEESETIIDW PGQPEIRP A  FRD+NRPISRSPLGIS RPIS
Subjt:  MEDWKQSNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPIS

KAG6584306.1 DEAD-box ATP-dependent RNA helicase 27, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2577.22Show/hide
Query:  MEDWKQSNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES
        ME+WKQ+ R     MEKIGTPFPVHSQVRKIKEESE IIDWRPGQPEI+PP   FR++NR ISRSPLG+S RPISVGES
Subjt:  MEDWKQSNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES

KAG7012158.1 hypothetical protein SDJN02_24910, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2984.81Show/hide
Query:  MEDWKQSNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES
        MEDWK +NRENR  MEKIGT FPVHSQVRKIKEESETIIDW PGQPEIRP A  FRD+NRPISRSPLGIS RPISVG+S
Subjt:  MEDWKQSNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES

KGN64190.1 hypothetical protein Csa_013611, partial [Cucumis sativus]1.4e-1877.27Show/hide
Query:  TMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES
        +MEKI  PFPVHSQVRKIKEES+T IDWRPGQPEIRPP  +FR     ISRSPLGIS RPISVG+S
Subjt:  TMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES

TYJ99047.1 hypothetical protein E5676_scaffold248G002510 [Cucumis melo var. makuwa]6.1e-1972.6Show/hide
Query:  SNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES
        S+   R + EKI  PFPVHSQVRKIKEESETI+DWRPGQPEIRPP   FR     ISRSPLGIS RPISVG+S
Subjt:  SNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES

TrEMBL top hitse value%identityAlignment
A0A0A0LQJ2 Uncharacterized protein6.6e-1977.27Show/hide
Query:  TMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES
        +MEKI  PFPVHSQVRKIKEES+T IDWRPGQPEIRPP  +FR     ISRSPLGIS RPISVG+S
Subjt:  TMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES

A0A498I238 Uncharacterized protein9.8e-1558.75Show/hide
Query:  MEDWKQSN-RENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES
        ME+   +N R+     E++G  FPVHSQVRKIK+ES+  IDW PG+PE+R P   F+++ R ISRSPLGISCRPISVG+S
Subjt:  MEDWKQSN-RENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES

A0A540KEP9 Uncharacterized protein9.8e-1558.75Show/hide
Query:  MEDWKQSN-RENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES
        ME+   +N R+     E++G  FPVHSQVRKIK+ES+  IDW PG+PE+R P   F+++ R ISRSPLGISCRPISVG+S
Subjt:  MEDWKQSN-RENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES

A0A540NFV0 Uncharacterized protein2.2e-1455.84Show/hide
Query:  KQSNRENRVT--MEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES
        + SN   ++   +E++G  FPVHSQV+KIK+ES+  IDW PG PE+R P   F+++ R +SRSPLGISCRPISVG+S
Subjt:  KQSNRENRVT--MEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES

A0A5D3BIV4 Uncharacterized protein3.0e-1972.6Show/hide
Query:  SNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES
        S+   R + EKI  PFPVHSQVRKIKEESETI+DWRPGQPEIRPP   FR     ISRSPLGIS RPISVG+S
Subjt:  SNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTGGAAGCAGAGCAATCGCGAGAACAGAGTGACGATGGAGAAGATCGGAACTCCGTTTCCCGTTCATAGCCAGGTCAGGAAGATCAAGGAGGAATCGGAGAC
GATCATCGATTGGCGACCGGGACAGCCGGAGATCAGACCGCCCGCCGTCACCTTCCGAGACCTTAATCGGCCGATCTCTCGCTCGCCGCTTGGAATCTCCTGCCGGCCGA
TTTCAGTGGGGGAATCGTAG
mRNA sequenceShow/hide mRNA sequence
ATTTCCCCACCCAACTTCCATCTTCCCTCCCATCTTACGTCTCATACTCGTATTCTCTCTTTCTCTCTCTATCGCCATCGCCGTTTCTCTCTCTAGATTCGGTATTATAT
AAGCCATCGCCAGGTAGTGACAGGGTCCAGGTATAGATTATTCGGAACGCCTCTTCGATTTAGGGTTTTGTTTTTGTTCTTCTGAGATGGAGGATTGGAAGCAGAGCAAT
CGCGAGAACAGAGTGACGATGGAGAAGATCGGAACTCCGTTTCCCGTTCATAGCCAGGTCAGGAAGATCAAGGAGGAATCGGAGACGATCATCGATTGGCGACCGGGACA
GCCGGAGATCAGACCGCCCGCCGTCACCTTCCGAGACCTTAATCGGCCGATCTCTCGCTCGCCGCTTGGAATCTCCTGCCGGCCGATTTCAGTGGGGGAATCGTAGAGAT
ATACTCTTGGTTTAGGGCTTATTTCTGTGAGCAGATGGAGATGGAGATTGATTGACTGTTCTCTGTTTTCGTTTCTCTTCCCTTTTCCGATACTACGGATTGAGATAGCC
CTAGCCTTGCCTAGTTATTTTCTTTTTCTTTTTCTTTTTCTTCTATTGTAAATATTTTGTTTTGTTTAATAGAGAAATTTTTGGATTTTGT
Protein sequenceShow/hide protein sequence
MEDWKQSNRENRVTMEKIGTPFPVHSQVRKIKEESETIIDWRPGQPEIRPPAVTFRDLNRPISRSPLGISCRPISVGES