; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017620 (gene) of Snake gourd v1 genome

Gene IDTan0017620
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG09:56612610..56614176
RNA-Seq ExpressionTan0017620
SyntenyTan0017620
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139075.1 chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus]9.7e-14995.97Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAARQRLG +PS GSSRKSASFVVRAE   PVKQGADRQLWFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_008450298.1 PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo]1.8e-14795.24Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAARQRLG KPS GSSRKSASFVVRA    PVKQGADRQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPKWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_022933380.1 chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata]5.3e-14795.26Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS+GSSRK+ASFVVRAE   PVKQGA+RQLWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW NPGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_023006167.1 chlorophyll a-b binding protein 8, chloroplastic [Cucurbita maxima]1.2e-14695.26Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS+GSSRK+ASFVVRAE   PVKQGA+RQLWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDW NPGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_038879830.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hispida]9.7e-14996.34Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAARQRLG KPS GSSRK+ASFVVRAE   PVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

TrEMBL top hitse value%identityAlignment
A0A0A0LXV0 Chlorophyll a-b binding protein, chloroplastic4.7e-14995.97Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAARQRLG +PS GSSRKSASFVVRAE   PVKQGADRQLWFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A1S3BPK7 Chlorophyll a-b binding protein, chloroplastic8.9e-14895.24Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAARQRLG KPS GSSRKSASFVVRA    PVKQGADRQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPKWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A5D3DX73 Chlorophyll a-b binding protein, chloroplastic8.9e-14895.24Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAARQRLG KPS GSSRKSASFVVRA    PVKQGADRQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPKWLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY
        VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSGDPAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1F4Q9 Chlorophyll a-b binding protein, chloroplastic2.6e-14795.26Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS+GSSRK+ASFVVRAE   PVKQGA+RQLWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW NPGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1KV56 Chlorophyll a-b binding protein, chloroplastic5.8e-14795.26Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS+GSSRK+ASFVVRAE   PVKQGA+RQLWFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDW NPGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

SwissProt top hitse value%identityAlignment
P27521 Chlorophyll a-b binding protein 4, chloroplastic1.4e-4144.32Show/hide
Query:  LTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAML
        LT S G   + L +  S+GSS K++SF V A+ G           W     S  YL GSL GD GFDPLGL+ DPE        KW    E++NGR+AML
Subjt:  LTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAML

Query:  GAAGAIAPEIFGSLGLI-PPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMG-----KQYFLGLEKFLGGSGDPAYPGG
        G AG + PE+F  +G+I  PE    W+       AG   Y+A   TLFV E  L  + E RR+QD  NPGS+      KQY L         G+  YPGG
Subjt:  GAAGAIAPEIFGSLGLI-PPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMG-----KQYFLGLEKFLGGSGDPAYPGG

Query:  PLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVL
         +FNPL F   +    E K KE+ NGRLAMLA LG+ VQ  VTG GP++NLL HLSDP +N ++
Subjt:  PLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVL

P27522 Chlorophyll a-b binding protein 8, chloroplastic2.3e-13286.13Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG
        MATQAL+ SSS+++S  AARQ +G++ S   +RK ASFVVRA    PVKQGA+RQLWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYG
Subjt:  MATQALV-SSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEI G  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEK LGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF+Q LVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q32904 Chlorophyll a-b binding protein 3, chloroplastic9.2e-12682.73Show/hide
Query:  MATQALV-SSSLTSSVGAARQRLGTK---PSVGSSRKSASFVVRAEGGAPVKQ-GADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKW
        MATQALV SSSLT +  A RQ    +    SVG SRK    +VRA    PVKQ G DR LWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+W
Subjt:  MATQALV-SSSLTSSVGAARQRLGTK---PSVGSSRKSASFVVRAEGGAPVKQ-GADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKW

Query:  LAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGS
        LAYGEVINGRFAMLGA GAIAPE  G +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEK  GGS
Subjt:  LAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGS

Query:  GDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        G+PAYPGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDH++DPVNNNVLTSLKFH
Subjt:  GDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic1.2e-4543.51Show/hide
Query:  SFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-
        S V  A GG       +R  W        YLDG+L GDYGFDPLGL  DPE        KW    E+++ RFAMLG AG +  ++  + G+      LP 
Subjt:  SFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-

Query:  WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRL
        W++ G +     +++ A   TL V +  LMGFAE +R+ D+ +PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLKE+KNGRL
Subjt:  WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRL

Query:  AMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        AM+A+LG+FVQ  VT  GP  NL++HLS+P +  ++ +L
Subjt:  AMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

Q9SY97 Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic1.2e-13385.35Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MA QALVSSSLTSSV  ARQ  G+KP   +S+K +SFVV+A    PVKQGA+R LWFAS QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY
        +INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW NPGSMGKQYFLGLEK L GSG+PAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 58.8e-4743.51Show/hide
Query:  SFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-
        S V  A GG       +R  W        YLDG+L GDYGFDPLGL  DPE        KW    E+++ RFAMLG AG +  ++  + G+      LP 
Subjt:  SFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-

Query:  WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRL
        W++ G +     +++ A   TL V +  LMGFAE +R+ D+ +PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLKE+KNGRL
Subjt:  WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRL

Query:  AMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        AM+A+LG+FVQ  VT  GP  NL++HLS+P +  ++ +L
Subjt:  AMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

AT1G45474.2 photosystem I light harvesting complex gene 58.8e-4743.51Show/hide
Query:  SFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-
        S V  A GG       +R  W        YLDG+L GDYGFDPLGL  DPE        KW    E+++ RFAMLG AG +  ++  + G+      LP 
Subjt:  SFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-

Query:  WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRL
        W++ G +     +++ A   TL V +  LMGFAE +R+ D+ +PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLKE+KNGRL
Subjt:  WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRL

Query:  AMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        AM+A+LG+FVQ  VT  GP  NL++HLS+P +  ++ +L
Subjt:  AMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

AT1G61520.1 photosystem I light harvesting complex gene 38.5e-13585.35Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MA QALVSSSLTSSV  ARQ  G+KP   +S+K +SFVV+A    PVKQGA+R LWFAS QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY
        +INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW NPGSMGKQYFLGLEK L GSG+PAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

AT1G61520.2 photosystem I light harvesting complex gene 38.6e-11185.91Show/hide
Query:  QLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPY
        ++W  S  S      SLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE+INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD Y
Subjt:  QLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPY

Query:  TLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQN
        TLFV EMALMGFAEHRR QDW NPGSMGKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQN
Subjt:  TLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQN

Query:  LLDHLSDPVNNNVLTSLKFH
        LLDHL+DPVNNNVLTSLKFH
Subjt:  LLDHLSDPVNNNVLTSLKFH

AT1G61520.3 photosystem I light harvesting complex gene 38.5e-13585.35Show/hide
Query:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MA QALVSSSLTSSV  ARQ  G+KP   +S+K +SFVV+A    PVKQGA+R LWFAS QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY
        +INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW NPGSMGKQYFLGLEK L GSG+PAY
Subjt:  VINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAY

Query:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCAGGCTCTTGTTTCATCTTCTTTAACCTCTTCAGTTGGCGCAGCCAGACAAAGATTAGGGACAAAACCCTCTGTTGGATCCTCCAGAAAATCTGCTTCTTT
TGTTGTTAGAGCTGAAGGCGGAGCTCCTGTTAAGCAAGGAGCAGACAGACAACTATGGTTTGCCTCAAAACAAAGTCTGTCTTACCTTGATGGAAGTCTCCCGGGCGATT
ACGGATTCGACCCATTGGGGCTATCGGACCCCGAGGGTACAGGAGGGTTCATCGAGCCGAAATGGTTGGCATACGGCGAGGTGATCAACGGGAGGTTCGCGATGCTGGGA
GCAGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGGGTCATCCCACCAGCAGGGACCTACAA
CTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGATGGCTCTAATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAACCCAGGGTCCATGGGAAAGCAAT
ACTTTTTGGGCCTAGAGAAATTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGACCCTTGTTCAACCCTCTAGGATTTGGAAAAGATGAGAAGTCAATGAAGGAA
TTGAAGCTCAAGGAAGTGAAGAATGGGAGACTTGCAATGTTGGCAATTTTGGGTTACTTTGTACAAGGTCTTGTGACTGGTGTTGGGCCTTACCAAAACCTTTTGGATCA
TTTATCTGACCCTGTCAACAACAATGTTTTGACAAGCCTTAAATTCCACTAG
mRNA sequenceShow/hide mRNA sequence
CTTCCCCTCTTCAACCAGTGGCTTATCTTATTCTTTCCCATTTCCATTTTATTATTCCTATTCTCCTCTCACATCATTCCACCAACCATTTTCAAGCCTTCCTTAATTTC
TTCCCCTTTTCTCTGAAACAAAGATAAGGCGCTATGGCCACTCAGGCTCTTGTTTCATCTTCTTTAACCTCTTCAGTTGGCGCAGCCAGACAAAGATTAGGGACAAAACC
CTCTGTTGGATCCTCCAGAAAATCTGCTTCTTTTGTTGTTAGAGCTGAAGGCGGAGCTCCTGTTAAGCAAGGAGCAGACAGACAACTATGGTTTGCCTCAAAACAAAGTC
TGTCTTACCTTGATGGAAGTCTCCCGGGCGATTACGGATTCGACCCATTGGGGCTATCGGACCCCGAGGGTACAGGAGGGTTCATCGAGCCGAAATGGTTGGCATACGGC
GAGGTGATCAACGGGAGGTTCGCGATGCTGGGAGCAGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAA
AACTGGGGTCATCCCACCAGCAGGGACCTACAACTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGATGGCTCTAATGGGCTTTGCTGAACACAGAAGATTTCAAG
ATTGGGCCAACCCAGGGTCCATGGGAAAGCAATACTTTTTGGGCCTAGAGAAATTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGACCCTTGTTCAACCCTCTA
GGATTTGGAAAAGATGAGAAGTCAATGAAGGAATTGAAGCTCAAGGAAGTGAAGAATGGGAGACTTGCAATGTTGGCAATTTTGGGTTACTTTGTACAAGGTCTTGTGAC
TGGTGTTGGGCCTTACCAAAACCTTTTGGATCATTTATCTGACCCTGTCAACAACAATGTTTTGACAAGCCTTAAATTCCACTAGATCAATAAGGGATGTGTGATTTGGT
CATTTATGTGTATTATAATATATATTAATTTGGGTCACACTCCTTTCTGTTGCTTTGGAGCTTTCAAAATTGGTTGCCTCTATCTCCCTCTCTCTCTCTCTCTATTGTAA
CATGAATTGAGGAAAAACTTCTCTGTAATACTCTCTTCTGATGTTCTTCTTTGTAAGAATATTGACATGTTGATTACCTATTTATATATTAGGTAGATTAAAATGGTCAA
CTATATATCAATCGATGCATCTCTTTTGGCGAGTTAAAAGTAGCATGGC
Protein sequenceShow/hide protein sequence
MATQALVSSSLTSSVGAARQRLGTKPSVGSSRKSASFVVRAEGGAPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLG
AAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKE
LKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH