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Tan0017640 (gene) of Snake gourd v1 genome

Gene IDTan0017640
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCytoplasmic tRNA 2-thiolation protein 1
Genome locationLG11:1781283..1781486
RNA-Seq ExpressionTan0017640
SyntenyTan0017640
Gene Ontology termsGO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4347851.1 hypothetical protein G4B88_030584 [Cannabis sativa]7.7e-2370.13Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV
        MPLHYPRY+KKDY+DMPEWKLDRLL EYGLPT GDL YKR FA+GAFLWP F           +HSF D SLL+KKV
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV

KAF4351382.1 hypothetical protein G4B88_028221 [Cannabis sativa]3.5e-2370.13Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV
        MPLHYPRY+KKDY+DMPEWKLDRLL EYGLPT GDL YKR FA+GAFLWP F           +HSF D SLL+KKV
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV

KAG6578420.1 hypothetical protein SDJN03_22868, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2582.35Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHHSFK-DPSLLNKKVM
        MPLHYPRYSK DYE+MPEWKLDRLL+EYGLPT G+LPYKRQFAMGAFLW D+H +FK DPSLLN K+M
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHHSFK-DPSLLNKKVM

PON37357.1 hypothetical protein PanWU01x14_320780 [Parasponia andersonii]2.9e-2277.27Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHHSFKDPSLLNKKV
        MPLHYPRY+KKDY+DMPEWKLDRLL EYGL T GDL YKR FA+GAFLWPD+  +F D SLL+KKV
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHHSFKDPSLLNKKV

PON65649.1 cytoplasmic tRNA 2-thiolation protein [Trema orientale]6.5e-2267.53Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFH-----------HSFKDPSLLNKKV
        MPLHYPRY+KKDY+DMPEWKLDRLL EYGL T GDL YKR FA+GAFLWPD+H            +F D SLL+KKV
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFH-----------HSFKDPSLLNKKV

TrEMBL top hitse value%identityAlignment
A0A2P5ALC9 Uncharacterized protein1.4e-2277.27Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHHSFKDPSLLNKKV
        MPLHYPRY+KKDY+DMPEWKLDRLL EYGL T GDL YKR FA+GAFLWPD+  +F D SLL+KKV
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHHSFKDPSLLNKKV

A0A2P5CX72 Cytoplasmic tRNA 2-thiolation protein3.2e-2267.53Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFH-----------HSFKDPSLLNKKV
        MPLHYPRY+KKDY+DMPEWKLDRLL EYGL T GDL YKR FA+GAFLWPD+H            +F D SLL+KKV
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFH-----------HSFKDPSLLNKKV

A0A7J6DP11 Uncharacterized protein3.7e-2370.13Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV
        MPLHYPRY+KKDY+DMPEWKLDRLL EYGLPT GDL YKR FA+GAFLWP F           +HSF D SLL+KKV
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV

A0A7J6DZ12 Uncharacterized protein1.7e-2370.13Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV
        MPLHYPRY+KKDY+DMPEWKLDRLL EYGLPT GDL YKR FA+GAFLWP F           +HSF D SLL+KKV
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV

A0A803NG19 Uncharacterized protein3.7e-2370.13Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV
        MPLHYPRY+KKDY+DMPEWKLDRLL EYGLPT GDL YKR FA+GAFLWP F           +HSF D SLL+KKV
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDF-----------HHSFKDPSLLNKKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein5.9e-1360.71Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGD--LPYKRQFAMGAFLWPDFHH
        MPLHYPRY+K+DYE+M EW+LD LL EYGL    D  L  KR FA+  F+WP  HH
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGD--LPYKRQFAMGAFLWPDFHH

AT3G11405.1 unknown protein9.4e-1160Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTR-GDLPYKRQFAMGAFLW
        MPL YP Y+K+ Y+ M E +LDRLL  YGLPT  G+L  K++FA+GAFLW
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTR-GDLPYKRQFAMGAFLW

AT3G55570.1 unknown protein5.0e-2064.62Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHHSFKDPSLLNKK
        MPLHYPRYSK+DY+DMPEWKLDR+L +YGL T GDL +KR FA+GAFLW     S ++P L  +K
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHHSFKDPSLLNKK

AT5G41761.1 unknown protein1.5e-1671.43Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLW
        +PLHYP+Y+K DYE MPEW+LDRLL EYGLP  GD   KR+FA+GAFLW
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLW

AT5G55620.1 unknown protein1.1e-1156.86Show/hide
Query:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPD
        +PLHYP+YSK DYE M + +LD LL +YG    G L  KR FA+ +FLWPD
Subjt:  MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACTTCACTATCCGAGATACTCAAAGAAGGACTACGAAGACATGCCTGAATGGAAGCTCGACCGCCTTCTCGTCGAGTATGGCCTCCCGACTCGAGGTGACTTGCC
CTACAAGAGGCAATTTGCAATGGGTGCTTTCCTTTGGCCTGATTTCCACCATAGCTTTAAAGATCCCTCTCTTCTCAACAAAAAAGTTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACTTCACTATCCGAGATACTCAAAGAAGGACTACGAAGACATGCCTGAATGGAAGCTCGACCGCCTTCTCGTCGAGTATGGCCTCCCGACTCGAGGTGACTTGCC
CTACAAGAGGCAATTTGCAATGGGTGCTTTCCTTTGGCCTGATTTCCACCATAGCTTTAAAGATCCCTCTCTTCTCAACAAAAAAGTTATGTAG
Protein sequenceShow/hide protein sequence
MPLHYPRYSKKDYEDMPEWKLDRLLVEYGLPTRGDLPYKRQFAMGAFLWPDFHHSFKDPSLLNKKVM