; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017651 (gene) of Snake gourd v1 genome

Gene IDTan0017651
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDUF1713 domain-containing protein
Genome locationLG07:65704138..65706764
RNA-Seq ExpressionTan0017651
SyntenyTan0017651
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
InterPro domainsIPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650785.1 hypothetical protein Csa_017463 [Cucumis sativus]9.6e-5483.85Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MAS+LQ LIRKSPPTR+IAA G+QTSQNLS P+ILHQPLD DKKPD HC SN+NS +T+NPS FSQF+PSFPFGLCLPQISSTGL+ FEPD VE+DDSR 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_011651574.1 uncharacterized protein LOC101220058 [Cucumis sativus]9.6e-5483.85Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MAS+LQ LIRKSPPTR+IAA G+QTSQNLS P+ILHQPLD DKKPD HC SN+NS +T+NPS FSQF+PSFPFGLCLPQISSTGL+ FEPD VE+DDSR 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_022928332.1 uncharacterized protein LOC111435191 [Cucurbita moschata]3.0e-5587.69Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MASILQKLIRKSPPTR IAA  SQTSQNLS PYILHQPLDID+KPDGHC SNLN+V+T+NPSQFS FFPSFPFGLCL QISSTG + FEPDYVE+DDSR 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_022989528.1 uncharacterized protein LOC111486591 [Cucurbita maxima]7.4e-5487.69Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MASILQKLIRKSPPTR IAA GSQTSQN S PYILHQPLDID+KPDGHC SNLNSV+T+ PSQFSQFFPSFPFGL L QISSTG + FEPDYVEE+DSR 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_023530210.1 uncharacterized protein LOC111792842 [Cucurbita pepo subsp. pepo]1.8e-5588.46Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MASILQKLIRKSPPTR IAA GSQTSQNLS PYILHQPLDID+KPDGHC SNLNSV+T+NPSQFS FFPSFPFGLCL QI STG + FEPDYVEEDD R 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
TrEMBL top hitse value%identityAlignment
A0A0A0LDP0 DUF1713 domain-containing protein4.7e-5483.85Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MAS+LQ LIRKSPPTR+IAA G+QTSQNLS P+ILHQPLD DKKPD HC SN+NS +T+NPS FSQF+PSFPFGLCLPQISSTGL+ FEPD VE+DDSR 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A5A7UNU9 DUF1713 domain-containing protein6.1e-5484.62Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MAS+LQKLIRKSPP+R+IAA G+QTSQNLS P+ILHQPLD DKK D H  SNLNS +T+NPSQFSQF+PSFPFGLCLPQISSTGL+ FEPDYVE+DDSR 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1EJL0 uncharacterized protein LOC1114351911.4e-5587.69Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MASILQKLIRKSPPTR IAA  SQTSQNLS PYILHQPLDID+KPDGHC SNLN+V+T+NPSQFS FFPSFPFGLCL QISSTG + FEPDYVE+DDSR 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1F832 uncharacterized protein LOC1114417235.7e-5280.77Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MAS+LQKL+RKSPPTR+IAA G+QTSQN   PYILHQPLD DKKPD HC SNLNSV+T+NPS FS F+PSFPFG CLPQISS+G++ FEP++VE+DDSR 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1JQJ4 uncharacterized protein LOC1114865913.6e-5487.69Show/hide
Query:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM
        MASILQKLIRKSPPTR IAA GSQTSQN S PYILHQPLDID+KPDGHC SNLNSV+T+ PSQFSQFFPSFPFGL L QISSTG + FEPDYVEE+DSR 
Subjt:  MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRM

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63150.1 unknown protein1.2e-0945.16Show/hide
Query:  KKPDGHCVSNLNSVATANPS-QFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSR----MLWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +KPD    +N     + N S Q  +F+PSF  GLCL      GL   E   +EE++      +++ADSVKKKRK+KMNKHKY+KLRK+L R++
Subjt:  KKPDGHCVSNLNSVATANPS-QFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSR----MLWADSVKKKRKRKMNKHKYKKLRKRLRRQT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGATTCTTCAAAAGCTCATTAGAAAATCGCCACCCACAAGAATAATTGCTGCTTTCGGTAGCCAGACCTCACAAAATCTCTCAGCACCCTACATTCTTCACCA
GCCGCTTGACATTGATAAGAAACCAGACGGGCATTGCGTTTCTAATTTAAACTCTGTTGCAACTGCGAATCCGTCTCAGTTTTCGCAGTTTTTCCCTAGTTTTCCATTTG
GGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGGTTACGTTCGAGCCTGATTATGTTGAAGAAGATGATTCTCGGATGTTGTGGGCTGATAGCGTGAAGAAGAAGAGG
AAGCGCAAGATGAACAAGCACAAGTACAAGAAGCTGAGGAAGAGGCTCCGAAGACAGACATAG
mRNA sequenceShow/hide mRNA sequence
TCTGGTTAGGGTTTGTGGCGCTGTTTGTTCTCCCACTTTCTGCAGAGTTCGCTTCCGCTTTACATCTCCATCAGTAAATCATTCTAAAAGATACAGCTTCATTCATTTTC
AAAAGCTTCGCTCTGTTTCAATGGCGTCGATTCTTCAAAAGCTCATTAGAAAATCGCCACCCACAAGAATAATTGCTGCTTTCGGTAGCCAGACCTCACAAAATCTCTCA
GCACCCTACATTCTTCACCAGCCGCTTGACATTGATAAGAAACCAGACGGGCATTGCGTTTCTAATTTAAACTCTGTTGCAACTGCGAATCCGTCTCAGTTTTCGCAGTT
TTTCCCTAGTTTTCCATTTGGGCTTTGCTTGCCGCAAATCTCCTCAACTGGGTTGGTTACGTTCGAGCCTGATTATGTTGAAGAAGATGATTCTCGGATGTTGTGGGCTG
ATAGCGTGAAGAAGAAGAGGAAGCGCAAGATGAACAAGCACAAGTACAAGAAGCTGAGGAAGAGGCTCCGAAGACAGACATAGTTGTTTTTGTTTTGGAAAAGGTCGTGA
TAATATAGGAAGATGCACTTCCATTGTTGACTGATACTTGTTAGTTGGGATAGCATAAGCAGACTTCAATGTGGTTAACTATGTACACTAATTTTGAAATTGAGGCAGAA
GTTCGAGAATGCACGAGAATTCAATATTTCCAATATTTGGAACCAATAATTGTTGTTGGGAGCCTACTGATGTATTGATTGACAGGAGATGACAACAATGACCTGATATG
CTTTCCTTTTCTATCTGCTGCTGTGACATATATATGAAAGATTTCTTTTCAAAACTGTATTGTCATTCTTGTTTGATGAAGAGGGCTTGCCCCACTCACTAAGCTGTGAA
GTAGATCATACACTTGCACCTCCCTCTTTTCGTACAATGCCACTTGGCAACTTCATTGGTGTTCTCGGTGTCGATCTGAGTACGGTAGAAATAGCATTGTACCTGCTGAA
TGGTCTGTAAAAAAGATAAATTTGTTAGACTCTTCTACCTGTTATTAGACTAAGAAATTGTTTGATCGGAACTGAACCGATATGACTGCTAAACCCGATCAACTATGTGC
TCAATGTATTCTGTAAACCCAGAACCTTCAGAGCCAAGCAAAGAAATCTGTGAGGCAAATCTAGATTCTCTGCCATGGATTGGGGGCATGTCTCATCATCCCATCACTAC
AGCAAAAAAGAAGAGGTAGGATCACAGAGGCCCACAATTTCTTTTCTTCTATTCTTTTACATAAAACATGGGACCCCCTCTCCCTTTATTCTG
Protein sequenceShow/hide protein sequence
MASILQKLIRKSPPTRIIAAFGSQTSQNLSAPYILHQPLDIDKKPDGHCVSNLNSVATANPSQFSQFFPSFPFGLCLPQISSTGLVTFEPDYVEEDDSRMLWADSVKKKR
KRKMNKHKYKKLRKRLRRQT