; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017660 (gene) of Snake gourd v1 genome

Gene IDTan0017660
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPotassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome locationLG01:17692891..17709892
RNA-Seq ExpressionTan0017660
SyntenyTan0017660
Gene Ontology termsGO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022932131.1 uncharacterized protein LOC111438454 [Cucurbita moschata]9.7e-8686.27Show/hide
Query:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK
        LHLHLL APNP  L+L +SQ  FTNPLQIT KR LS +KCSSE SESDPNFPSP+P F ALN+ ESFPIEKRRRSEIVR+RRPSKDIVKPEPPNFEIGWK
Subjt:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK

Query:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA
        RTKEINLE P+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVEDRMVTELFRVLKLMEMDL MVKAAVKD+TLS+RLAQAKA
Subjt:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA

Query:  RCRE
        RCR+
Subjt:  RCRE

XP_022985263.1 uncharacterized protein LOC111483306 [Cucurbita maxima]1.7e-8585.29Show/hide
Query:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK
        LHLH+L APNP  L+L QSQ  FTNPLQIT KR LS +KCSSE SESDPNFPSPDP F ALN+ ESFP+EKRRRSEIVR+RRPSK+IVKPEPPNFEIGWK
Subjt:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK

Query:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA
        RTKEINLE P+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVEDRMVTELFRVLKLMEMDL MVKAAV+D+TL+QRLAQAKA
Subjt:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA

Query:  RCRE
        RCR+
Subjt:  RCRE

XP_023520419.1 uncharacterized protein LOC111783811 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-8386.5Show/hide
Query:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK
        LHLHLL APNP  L+L QSQ  FTNPLQIT KR LS +KCSSE SESDPNFPSP+P F ALN+ ESFPIEKRRRSEIVR+RRPSKDIVKP+PPNFEIGWK
Subjt:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK

Query:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA
        RTKEINLE P+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVEDRMVTELFRVLKLMEMDL MVKAAVKD+TLS+RLAQAKA
Subjt:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA

XP_023520420.1 uncharacterized protein LOC111783811 isoform X2 [Cucurbita pepo subsp. pepo]1.2e-8386.5Show/hide
Query:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK
        LHLHLL APNP  L+L QSQ  FTNPLQIT KR LS +KCSSE SESDPNFPSP+P F ALN+ ESFPIEKRRRSEIVR+RRPSKDIVKP+PPNFEIGWK
Subjt:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK

Query:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA
        RTKEINLE P+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVEDRMVTELFRVLKLMEMDL MVKAAVKD+TLS+RLAQAKA
Subjt:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA

XP_038903493.1 uncharacterized protein LOC120090072 isoform X2 [Benincasa hispida]2.6e-8382.86Show/hide
Query:  MATSHLHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNF
        MA+S  HLH LS PNP  LIL QSQ +FT PLQITSKR+ S IKC+S++SESDPNFPSPDP+FSALN+ ESFPIEKRRRSEIVR+RRP+ DI KPEPPNF
Subjt:  MATSHLHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNF

Query:  EIGWKRTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRL
        EIGWKRTKEINLE PIGWMIMDFLEKLEGLM+REFGSTELLAKVGEIVAERAREEAEIL +DGKVE+RMVTELFRVLKLMEMD  MVKAAVKD+TLS+RL
Subjt:  EIGWKRTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRL

Query:  AQAKARCREQ
         QAKARC  Q
Subjt:  AQAKARCREQ

TrEMBL top hitse value%identityAlignment
A0A0A0L6D8 Uncharacterized protein4.9e-8381.34Show/hide
Query:  MATSHLHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNF
        MA+S  HLH LS PNP  L+L QS  +FT PLQITSKR LS IKC+S+DSESDPNFPSPDP+F ALN+ E+FPIEKRRRS+I+R+R+PS +I KPEPPNF
Subjt:  MATSHLHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNF

Query:  EIGWKRTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRL
        EIGWKRTKEI++E PIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILR+DGKVE+RMVTELFRVLKLMEMDL MVKAAVKD+TLS+RL
Subjt:  EIGWKRTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRL

Query:  AQAKARCRE
         QAKARCR+
Subjt:  AQAKARCRE

A0A1S3BT06 uncharacterized protein LOC1034934033.7e-8382.3Show/hide
Query:  MATSHLHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNF
        MA+S  HLH LS PNP  L+L QS  +FT PLQITSKR LS IK +S+DSESDPNFPSPDP+FSALN+ E+FPIEKRRRSEI+R+R+P+ +I KPEPPNF
Subjt:  MATSHLHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNF

Query:  EIGWKRTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRL
        EIGWKRTKEINLE PIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILR+DGKVE+RMVTELFRVLKLMEMDL MVKAAVKD+TLS+RL
Subjt:  EIGWKRTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRL

Query:  AQAKARCRE
         QAKARCR+
Subjt:  AQAKARCRE

A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 14.9e-8382.3Show/hide
Query:  MATSHLHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNF
        MA+S  HLH LS PNP  L+L QS  +FT PLQITSKR LS IK +S+DSESDPNFPSPDP FSALN+ E+FPIEKRRRSEI+R+R+P+ +I KPEPPNF
Subjt:  MATSHLHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNF

Query:  EIGWKRTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRL
        EIGWKRTKEINLE PIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILR+DGKVE+RMVTELFRVLKLMEMDL MVKAAVKD+TLS+RL
Subjt:  EIGWKRTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRL

Query:  AQAKARCRE
         QAKARCR+
Subjt:  AQAKARCRE

A0A6J1EVI2 uncharacterized protein LOC1114384544.7e-8686.27Show/hide
Query:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK
        LHLHLL APNP  L+L +SQ  FTNPLQIT KR LS +KCSSE SESDPNFPSP+P F ALN+ ESFPIEKRRRSEIVR+RRPSKDIVKPEPPNFEIGWK
Subjt:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK

Query:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA
        RTKEINLE P+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVEDRMVTELFRVLKLMEMDL MVKAAVKD+TLS+RLAQAKA
Subjt:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA

Query:  RCRE
        RCR+
Subjt:  RCRE

A0A6J1JD53 uncharacterized protein LOC1114833068.0e-8685.29Show/hide
Query:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK
        LHLH+L APNP  L+L QSQ  FTNPLQIT KR LS +KCSSE SESDPNFPSPDP F ALN+ ESFP+EKRRRSEIVR+RRPSK+IVKPEPPNFEIGWK
Subjt:  LHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWK

Query:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA
        RTKEINLE P+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVEDRMVTELFRVLKLMEMDL MVKAAV+D+TL+QRLAQAKA
Subjt:  RTKEINLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKA

Query:  RCRE
        RCR+
Subjt:  RCRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G51100.1 unknown protein2.2e-5664.95Show/hide
Query:  LSQSQLNFTNPLQITS---KRHLSMIKCSSEDSESDPNFPSPDPSFSALN--KAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWKRTKEINLEMP
        LS   L+   P++  S   +      KCSS + ES   F +  P+  ++N   AE FPIEKRRRSEI+R+ R  + I KPEPPNFEIGWKRTKEINLE P
Subjt:  LSQSQLNFTNPLQITS---KRHLSMIKCSSEDSESDPNFPSPDPSFSALN--KAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWKRTKEINLEMP

Query:  IGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKARCRE
         G++IMDFLEK E LM REFGS ELLAK GEIVAERAREEAE+LR++GKVE+RMVTELFRVLKLMEMDL MVKA+VKD+TLSQR+ QA+ARCR+
Subjt:  IGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKARCRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTCACACCTTCATCTCCATCTCCTCTCAGCCCCAAACCCAAACCGCCTTATTCTCTCTCAATCTCAGCTCAATTTCACAAACCCATTACAAATTACATCAAA
ACGGCACCTCTCAATGATTAAATGCAGCTCAGAAGACTCCGAATCCGACCCCAATTTCCCATCCCCAGATCCAAGTTTCAGCGCCCTAAACAAAGCAGAGAGCTTCCCGA
TCGAGAAACGAAGAAGATCCGAAATAGTCCGCGAAAGAAGACCCAGCAAAGACATCGTAAAGCCGGAGCCGCCCAACTTCGAAATCGGGTGGAAGAGGACGAAGGAGATC
AATTTGGAGATGCCGATCGGGTGGATGATAATGGACTTTCTTGAAAAGCTTGAAGGGCTGATGGAGAGGGAATTTGGGTCGACGGAGTTGCTGGCGAAAGTGGGAGAGAT
TGTGGCGGAGAGGGCCAGAGAGGAGGCGGAGATCTTGCGAGAGGATGGGAAAGTGGAGGACAGAATGGTTACTGAGTTGTTTAGGGTTTTGAAGTTGATGGAAATGGATT
TGGAAATGGTGAAGGCGGCTGTCAAGGATGACACTTTGAGTCAGCGGCTTGCTCAGGCCAAAGCTAGGTGCAGAGAACAACAGAGAAGATCTAGTGGTGGTATCTTCACA
CGTTCGGGTTCAAGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
GAATATCTAAAAGGAAAATTAAGGCAAAACTATCCATCCAAACATGCGATGCGAACAAAATAAGCTTTATCCACTCTGTTTCCCTCTGTATCACTCCGCTTCATCCAATC
TTTCTACTCTGCCATGGCTACCTCACACCTTCATCTCCATCTCCTCTCAGCCCCAAACCCAAACCGCCTTATTCTCTCTCAATCTCAGCTCAATTTCACAAACCCATTAC
AAATTACATCAAAACGGCACCTCTCAATGATTAAATGCAGCTCAGAAGACTCCGAATCCGACCCCAATTTCCCATCCCCAGATCCAAGTTTCAGCGCCCTAAACAAAGCA
GAGAGCTTCCCGATCGAGAAACGAAGAAGATCCGAAATAGTCCGCGAAAGAAGACCCAGCAAAGACATCGTAAAGCCGGAGCCGCCCAACTTCGAAATCGGGTGGAAGAG
GACGAAGGAGATCAATTTGGAGATGCCGATCGGGTGGATGATAATGGACTTTCTTGAAAAGCTTGAAGGGCTGATGGAGAGGGAATTTGGGTCGACGGAGTTGCTGGCGA
AAGTGGGAGAGATTGTGGCGGAGAGGGCCAGAGAGGAGGCGGAGATCTTGCGAGAGGATGGGAAAGTGGAGGACAGAATGGTTACTGAGTTGTTTAGGGTTTTGAAGTTG
ATGGAAATGGATTTGGAAATGGTGAAGGCGGCTGTCAAGGATGACACTTTGAGTCAGCGGCTTGCTCAGGCCAAAGCTAGGTGCAGAGAACAACAGAGAAGATCTAGTGG
TGGTATCTTCACACGTTCGGGTTCAAGTTGTTGAGATCGTGACAGTGGAAGAAGGAGTTCTAGAAGAAAGCATTCTTCAAAGGTAAGGCTAAGGACGTGCAGGGCGAGTG
ACGGAGGCGCGTTGCCAGGACCATGGAAATAGACATGTTTTCCGCACATTCTTTTATAACTGACGTTGTTCCTTTATATTTTCGAAGTTCAAATTTACTTTACAGATTTT
AAATAGGCCATGTTAAACTGCTCCTTTTATCTGGTTTTGAATGTTTTCTTGGGATCCCTAAAGACAAATTATTTTCATTGGAGATTTAAAGATCGTTTTA
Protein sequenceShow/hide protein sequence
MATSHLHLHLLSAPNPNRLILSQSQLNFTNPLQITSKRHLSMIKCSSEDSESDPNFPSPDPSFSALNKAESFPIEKRRRSEIVRERRPSKDIVKPEPPNFEIGWKRTKEI
NLEMPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEDRMVTELFRVLKLMEMDLEMVKAAVKDDTLSQRLAQAKARCREQQRRSSGGIFT
RSGSSC