; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017663 (gene) of Snake gourd v1 genome

Gene IDTan0017663
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiontrafficking protein particle complex subunit 2
Genome locationLG05:165206..172731
RNA-Seq ExpressionTan0017663
SyntenyTan0017663
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR006722 - Trafficking protein particle complex subunit 2
IPR011012 - Longin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147330.1 transport protein particle 20 kDa subunit [Cucumis sativus]2.4e-6898.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSR+TSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_008460820.1 PREDICTED: trafficking protein particle complex subunit 2 isoform X2 [Cucumis melo]7.1e-6898.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MA TACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_022157725.1 transport protein particle 20 kDa subunit [Momordica charantia]2.4e-6899.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRN+IPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_022947789.1 transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata]6.4e-69100Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

XP_038900562.1 transport protein particle 20 kDa subunit [Benincasa hispida]1.9e-6899.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

TrEMBL top hitse value%identityAlignment
A0A1Q3CPP9 Sedlin_N domain-containing protein2.2e-6795.56Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRN+IPIYEAEVGSAAKRED+AQLHQFILHA+LDIVQDLAWTTSAMFLKA+DRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKT+LNP+YLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A1S3CCU2 trafficking protein particle complex subunit 2 isoform X23.4e-6898.52Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MA TACFIIVSRNNIPIYEAEVGSA KREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A6J1DTW9 transport protein particle 20 kDa subunit1.2e-6899.26Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRN+IPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A6J1G7X4 transport protein particle 20 kDa subunit isoform X23.1e-69100Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

A0A6J1I1U1 transport protein particle 20 kDa subunit isoform X23.1e-69100Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

SwissProt top hitse value%identityAlignment
E2QV03 Trafficking protein particle complex subunit 21.1e-3147.1Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

F1SRI0 Trafficking protein particle complex subunit 21.1e-3147.1Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

P0DI81 Trafficking protein particle complex subunit 21.5e-3147.1Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

Q3T0F2 Trafficking protein particle complex subunit 21.1e-3147.1Show/hide
Query:  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ
        M+ +  F+IV  ++ P++E E    G A  ++D   L+QFI HA+LD+V +  W ++ M+LK VD+FN+  VS +VTAGH R ++LHD R +DGIK+FF 
Subjt:  MATTACFIIVSRNNIPIYEAE---VGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQ

Query:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        +V++LYIK  +NP Y P S I SS FD KV+ L +K+L
Subjt:  EVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

Q9USZ5 Transport protein particle 20 kDa subunit1.1e-3146.67Show/hide
Query:  TACFIIVSRNNIPIYEAEVGSAAKRED---SAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        TA   I+   + P+YE E+G   ++ D   ++ L+QFI+H+SLDIV  L WT++A ++K +D+F+++ +S YVT  + R MLLH +++ D IK FFQE+H
Subjt:  TACFIIVSRNNIPIYEAEVGSAAKRED---SAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIKT+++P Y P   I S  FD KVR++AR+YL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL

Arabidopsis top hitse value%identityAlignment
AT1G80500.1 SNARE-like superfamily protein9.0e-6992.59Show/hide
Query:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH
        MA TACFIIV RN+IPIYEAEVGSAAKRED+AQLHQFILHA+LD+VQDLAWTTSAMFLK+VDRFNDLVVSVYVTAGHTRLMLLHDSRN+DGIKSFFQEVH
Subjt:  MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVH

Query:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL
        ELYIK +LNPLYLPGSRITSSHFDTKVRALARKYL
Subjt:  ELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCACAGCTTGTTTCATCATCGTCAGTCGGAACAATATCCCTATTTATGAAGCTGAAGTCGGATCTGCTGCTAAAAGAGAGGATTCTGCTCAGCTGCATCAGTT
TATATTGCACGCATCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTTCTTGAAAGCAGTCGATAGGTTCAATGATCTGGTGGTGTCTGTATATGTAA
CTGCTGGTCATACAAGATTGATGTTACTTCATGACTCCCGCAACGATGATGGAATCAAGAGCTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTTAATCCC
CTCTACCTGCCTGGATCCCGCATCACGTCTTCGCATTTCGACACAAAAGTTCGTGCACTCGCAAGGAAGTATCTCTAG
mRNA sequenceShow/hide mRNA sequence
TATAGCACGAACGCCCCTCCGCTCTTTTTTTTTTCCCCTTATTTTCTCTTCCAGCGCGACCGTCCTCGATCTGCAAACGCACGCGGGTGGCCTCTGTGGCGTTTTCAGAC
TGATCCGGCGACGATCGTGAGCGAACGGCTGAATCGAGAGGCGGCGACGCGGTCTGGCGCGTTTCTGGTGAATTTTGGGCCCCCCCAAAAAAAAAAAACTCTCTCGGTCT
CTTTTCACTCCACCGGAAACCTCCCGAATTGCTTCTCAGTACTCAGTAATGGCGACCACAGCTTGTTTCATCATCGTCAGTCGGAACAATATCCCTATTTATGAAGCTGA
AGTCGGATCTGCTGCTAAAAGAGAGGATTCTGCTCAGCTGCATCAGTTTATATTGCACGCATCCCTTGACATTGTTCAAGACCTGGCATGGACTACTAGTGCTATGTTCT
TGAAAGCAGTCGATAGGTTCAATGATCTGGTGGTGTCTGTATATGTAACTGCTGGTCATACAAGATTGATGTTACTTCATGACTCCCGCAACGATGATGGAATCAAGAGC
TTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTTAATCCCCTCTACCTGCCTGGATCCCGCATCACGTCTTCGCATTTCGACACAAAAGTTCGTGCACTCGC
AAGGAAGTATCTCTAGTGCTCACCTTGATTGCAGACCAAATGTGCTTTGTGACAATGAGCTTCAAAGTTTATAGCAGCCTTGAGTTTTCTGTAATTGCGTAACATTTTGG
TCTTTGTTATTCGTGGTCCTGACATCAATCAACTCGGTAGTTTAATATTGCTCAATGTGTATTATTGACTTTGGTATGGCTTAATTATGAATAGGAATCGCTCTTTACAG
CATTGATTGATGTAATGCCCTCCCTGCCCCCTTTTACTCATCTTTTTGTAGTAGGGAGTATTATTTTGTTTTACATTTTACGAGACATGGATATTGAATCAGGCAAAATA
TGCATTTTTGAAAAGCTGAAGAGAGG
Protein sequenceShow/hide protein sequence
MATTACFIIVSRNNIPIYEAEVGSAAKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNP
LYLPGSRITSSHFDTKVRALARKYL