; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017763 (gene) of Snake gourd v1 genome

Gene IDTan0017763
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNuclear pore complex protein NUP35
Genome locationLG06:2112403..2115865
RNA-Seq ExpressionTan0017763
SyntenyTan0017763
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0051028 - mRNA transport (biological process)
GO:0031965 - nuclear membrane (cellular component)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0044615 - nuclear pore nuclear basket (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005543 - phospholipid binding (molecular function)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR007846 - RNA-recognition motif (RRM) Nup35-type domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR017389 - Nucleoporin, NUP53
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051033.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa]5.4e-17091.44Show/hide
Query:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK
        TVHRTP+SG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ H+FSSP K
Subjt:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPI+GQ SRQGSAGF+WWSTSK GGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RN LP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLNNPGFMVIPPVSSRTSELLATRGP RPY+LQNGN+
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS

Query:  NARQSGGTIASPSKSLVSKVMDLMFGV
        +AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  NARQSGGTIASPSKSLVSKVMDLMFGV

XP_004141656.1 nuclear pore complex protein NUP35 [Cucumis sativus]1.1e-17092.05Show/hide
Query:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK
        TVHRTP+SG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ H+FSSP K
Subjt:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPISGQQSRQGSAGF+WWSTSK GGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRN LP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ L+E+LNNPGFMVIPPVSSRTSELLATRGP RPYNLQNG +
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS

Query:  NARQSGGTIASPSKSLVSKVMDLMFGV
        +AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  NARQSGGTIASPSKSLVSKVMDLMFGV

XP_008462444.1 PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]3.5e-16991.13Show/hide
Query:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK
        TVHRTP+SG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ H+FSSP K
Subjt:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPI+GQ SRQGSAGF+WWSTSK GGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RN LP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLNNPGFMVIPPVSSRTSELLATRGP  PY+LQNGN+
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS

Query:  NARQSGGTIASPSKSLVSKVMDLMFGV
        +AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  NARQSGGTIASPSKSLVSKVMDLMFGV

XP_022151212.1 nuclear pore complex protein NUP35 [Momordica charantia]1.1e-17393.27Show/hide
Query:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK
        T+HRTP+SGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPESGIPDYPLSPEIKSDPRTPIQSH+FSSPMK
Subjt:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTP SGQQSRQGSAGF+WWSTSK GGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRN  PAGKLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS
        EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG+QINGVLIVGVKPVDPMHRQ LDEK+NNPGFMVIPPV SRT+ELLATRGP R YNLQNGNS
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS

Query:  NARQSGGTIASPSKSLVSKVMDLMFGV
        NARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  NARQSGGTIASPSKSLVSKVMDLMFGV

XP_038900103.1 nuclear pore complex protein NUP35 [Benincasa hispida]2.3e-17694.85Show/hide
Query:  MNT-VHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSS
        MNT VHRTP+SGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGI DYP+SPEIKSDPRTPIQSH+FSS
Subjt:  MNT-VHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSS

Query:  PMKNKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNL
        P+KNKSNASTSYTPISGQQSRQGSAGF+WWSTSK GGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRN LPA KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQN
        VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLN+PGFMV PPVSSRTSELLATRG  RPYNLQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQN

Query:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV
        GNS+ARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  GNSNARQSGGTIASPSKSLVSKVMDLMFGV

TrEMBL top hitse value%identityAlignment
A0A0A0K7B2 Nuclear pore complex protein NUP355.3e-17192.05Show/hide
Query:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK
        TVHRTP+SG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ H+FSSP K
Subjt:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPISGQQSRQGSAGF+WWSTSK GGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRN LP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ L+E+LNNPGFMVIPPVSSRTSELLATRGP RPYNLQNG +
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS

Query:  NARQSGGTIASPSKSLVSKVMDLMFGV
        +AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  NARQSGGTIASPSKSLVSKVMDLMFGV

A0A1S3CH09 Nuclear pore complex protein NUP351.7e-16991.13Show/hide
Query:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK
        TVHRTP+SG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ H+FSSP K
Subjt:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPI+GQ SRQGSAGF+WWSTSK GGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RN LP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLNNPGFMVIPPVSSRTSELLATRGP  PY+LQNGN+
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS

Query:  NARQSGGTIASPSKSLVSKVMDLMFGV
        +AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  NARQSGGTIASPSKSLVSKVMDLMFGV

A0A5A7U592 Nuclear pore complex protein NUP352.6e-17091.44Show/hide
Query:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK
        TVHRTP+SG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYP+SPE KSDPRTPI+ H+FSSP K
Subjt:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPI+GQ SRQGSAGF+WWSTSK GGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RN LP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVKPVDPMHRQ LDEKLNNPGFMVIPPVSSRTSELLATRGP RPY+LQNGN+
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS

Query:  NARQSGGTIASPSKSLVSKVMDLMFGV
        +AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  NARQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1DCV4 Nuclear pore complex protein NUP355.1e-17493.27Show/hide
Query:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK
        T+HRTP+SGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPESGIPDYPLSPEIKSDPRTPIQSH+FSSPMK
Subjt:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTP SGQQSRQGSAGF+WWSTSK GGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRN  PAGKLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS
        EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG+QINGVLIVGVKPVDPMHRQ LDEK+NNPGFMVIPPV SRT+ELLATRGP R YNLQNGNS
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS

Query:  NARQSGGTIASPSKSLVSKVMDLMFGV
        NARQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  NARQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1JYW9 Nuclear pore complex protein NUP352.3e-16689.94Show/hide
Query:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK
        TVHRT +SGRQSLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYP+SPE+KSDP TPIQSH+FSSPMK
Subjt:  TVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
        +KSNASTS+TPIS QQSRQ SAGF+WWST K GGSEQEDKGKSSPVEGVIQPGALITL TPREVARPEVQRN LPAGKLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS
        EFEKCGEILKHVPGPRDANWMHILY+NRS AHKAL+KNGIQING+LIVGVKPVDP+ RQTLDEKLNNPGFMV+PPVSSRT+EL    GP RPYN QNGNS
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNS

Query:  NARQSGG-TIASPSKSLVSKVMDLMFGV
         ARQSGG TIASPSKSLVSKVMDLMFGV
Subjt:  NARQSGG-TIASPSKSLVSKVMDLMFGV

SwissProt top hitse value%identityAlignment
O04326 Nuclear pore complex protein NUP354.7e-12469.6Show/hide
Query:  HRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS--HNFSSPMK
        HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPESGI DY  SP+ KSD RTP QS   N  +P K
Subjt:  HRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS--HNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVL
         K  AS S++ ++ QQS+Q S   +WWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +P G L+EEEWVTVYGFSP DTNLVL
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVL

Query:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGN
        REFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK G+ INGV+IVGVKPVDP+ +Q L+E+LNN GFM +PP SS  +     R  +RP  LQNG+
Subjt:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGN

Query:  SNARQ-SGGTIASPSKSLVSKVMDLMFGV
        + + Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  SNARQ-SGGTIASPSKSLVSKVMDLMFGV

Q66IJ0 Nucleoporin NUP355.0e-1727.73Show/hide
Query:  PDSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFS---S
        P +G Q L      D+ +PV        TP Q  ++  +  R    +   PP PV  T +D+SG+   P   I D   SP + S P  P ++ +FS   +
Subjt:  PDSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFS---S

Query:  PMKNKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNL
        P+     +S     ISG + R  S+ F   S + +G S +                   T  +P ++     Q + L +    ++ WVTV+GF  A  + 
Subjt:  PMKNKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNP--GFMVIPPV--------SSRTSELLATR
        +L +F + G I+KHV    + NWMHI YQ++  A KAL+K+G      +++GVKP          EK++ P    +  PPV        S  T    + R
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNP--GFMVIPPV--------SSRTSELLATR

Query:  GPARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG
          A  Y           +        +S+VSK M+ MFG
Subjt:  GPARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG

Q6P6X9 Nucleoporin NUP351.2e-1528.83Show/hide
Query:  TPDSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPM-K
        +P  G Q L      DL +PVT +   F   G A   S L          P P V T +D+SG              +P ++S       S    SP+  
Subjt:  TPDSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPM-K

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR
         K   +  +TP+SG Q   G+   N++S        Q+ K                T  +P +V     Q + L +    ++ W+TV+GF PA  + +L 
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDEKLNNPGFMVIPPVS---SRTSELLATRGPARPYN-L
        +F + G ILKHV      NWMH+ YQ++  A KAL+K+G      +++GVKP +D    ++LD K +    +  PPV    + +  L   R   RP +  
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDEKLNNPGFMVIPPVS---SRTSELLATRGPARPYN-L

Query:  QNGNSNARQSGGTIASPSK--SLVSKVMDLMFG
           +S+  Q      +P K  S VSK M+ MFG
Subjt:  QNGNSNARQSGGTIASPSK--SLVSKVMDLMFG

Q8NFH5 Nucleoporin NUP356.5e-1727.81Show/hide
Query:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMKNKSNASTSYTPISGQQ
        DL +PVT +    S  G +  V  +          P P V   +D+SG+   P   I D   SP + S P T           + + N S   +P+ G  
Subjt:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMKNKSNASTSYTPISGQQ

Query:  SRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPR
        S  G+ G + +S + +G           P +  + P  L    T         Q + L +    ++ WVTV+GF  A  + +L +F + G ILKHV    
Subjt:  SRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPR

Query:  DANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDE-KLNNPGFMVIPPVSS--------RTSELLATRGPARPYNLQNGNSNARQSG
          NWMHI YQ++  A KAL+K+G      +++GVKP +D    ++ D   L++P     PP+ +         T  +   R  A  Y     +       
Subjt:  DANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDE-KLNNPGFMVIPPVSS--------RTSELLATRGPARPYNLQNGNSNARQSG

Query:  GTIASPSKSLVSKVMDLMFG
         T     +SLVSK M+ MFG
Subjt:  GTIASPSKSLVSKVMDLMFG

Q8R4R6 Nucleoporin NUP351.0e-1427.5Show/hide
Query:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMKNKSNASTSYTPISGQQ
        DL +PVT +    S  G +  V  +          P P V   +D+SG+   P   I D   SP + S P T  +  N S        A+   TP+ GQ 
Subjt:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMKNKSNASTSYTPISGQQ

Query:  SRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPR
                + +S + +G           P +  + P  L    T         Q + L +    ++ WVTV+GF  A  + +L +F + G ILKHV    
Subjt:  SRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPR

Query:  DANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDE-KLNNPGFMVIPPV--------SSRTSELLATRGPARPYNLQNGNSNARQSG
          NWMHI YQ++  A KAL+K+G      +++GVKP +D    +  D   L++P      P+        S  T  +   R  A  Y     +       
Subjt:  DANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKP-VDPMHRQTLDE-KLNNPGFMVIPPV--------SSRTSELLATRGPARPYNLQNGNSNARQSG

Query:  GTIASPSKSLVSKVMDLMFG
         T     +SLVS+ M+ MFG
Subjt:  GTIASPSKSLVSKVMDLMFG

Arabidopsis top hitse value%identityAlignment
AT3G16310.1 mitotic phosphoprotein N' end (MPPN) family protein3.3e-12569.6Show/hide
Query:  HRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS--HNFSSPMK
        HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPESGI DY  SP+ KSD RTP QS   N  +P K
Subjt:  HRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQS--HNFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVL
         K  AS S++ ++ QQS+Q S   +WWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +P G L+EEEWVTVYGFSP DTNLVL
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSTSKVGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVL

Query:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGN
        REFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK G+ INGV+IVGVKPVDP+ +Q L+E+LNN GFM +PP SS  +     R  +RP  LQNG+
Subjt:  REFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGN

Query:  SNARQ-SGGTIASPSKSLVSKVMDLMFGV
        + + Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  SNARQ-SGGTIASPSKSLVSKVMDLMFGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACTGTGCATAGAACTCCCGACTCTGGGAGGCAGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGAAAATTTTCGACTCCAGGCCAGGC
AGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTTACCTTGGAAGACCGCTCAGGCTCAGATTTTTCTCCTGAGTCTG
GGATTCCTGACTATCCTCTTTCCCCAGAAATTAAATCAGACCCGAGGACCCCTATTCAAAGTCACAACTTCTCTTCGCCGATGAAAAACAAGTCAAATGCCAGCACTTCA
TACACGCCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCAACATCAAAAGTTGGTGGCAGTGAGCAAGAAGATAAGGGAAAAAGTTCACC
AGTCGAAGGTGTGATTCAACCTGGTGCATTGATCACACTTCCAACCCCAAGGGAAGTTGCCAGACCGGAGGTGCAGAGGAATTACTTGCCTGCAGGAAAACTCAATGAGG
AGGAATGGGTTACTGTCTATGGATTCTCCCCTGCTGATACAAATCTAGTTTTGAGGGAATTCGAAAAATGTGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCT
AATTGGATGCACATTCTTTATCAGAACCGATCTGATGCACACAAGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCC
AATGCATCGGCAGACACTCGATGAAAAGTTAAATAATCCAGGATTCATGGTTATCCCACCTGTATCGTCTCGAACCTCAGAACTCCTTGCAACGAGAGGGCCTGCACGTC
CCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCAGGAGGTACCATTGCCTCGCCATCGAAATCATTAGTGTCTAAGGTAATGGATTTGATGTTTGGAGTCTAG
mRNA sequenceShow/hide mRNA sequence
GTACTCCCCAACGGACGAAGTTGAAGTTTAGGGTTTCAAATTCCAATCTTTAGGTCTCTTCGTTCCATTTGGGCGTCTCTATGCTAAAATACTTTCGGGAGGGAAAATCC
CGAACAAAAAATCAAATTCTCGAGGCTCCTCGAATCTCAAATTCTCCAATCCAATCGATCAGTTAAGAGCAGAGCTTCAGCGCTTTTCGAAGTTGAGATATATTTCTCTT
CTAAGTCATGAACACTGTGCATAGAACTCCCGACTCTGGGAGGCAGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGAAAATTTTCGACTCCAG
GCCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTTACCTTGGAAGACCGCTCAGGCTCAGATTTTTCTCCT
GAGTCTGGGATTCCTGACTATCCTCTTTCCCCAGAAATTAAATCAGACCCGAGGACCCCTATTCAAAGTCACAACTTCTCTTCGCCGATGAAAAACAAGTCAAATGCCAG
CACTTCATACACGCCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCAACATCAAAAGTTGGTGGCAGTGAGCAAGAAGATAAGGGAAAAA
GTTCACCAGTCGAAGGTGTGATTCAACCTGGTGCATTGATCACACTTCCAACCCCAAGGGAAGTTGCCAGACCGGAGGTGCAGAGGAATTACTTGCCTGCAGGAAAACTC
AATGAGGAGGAATGGGTTACTGTCTATGGATTCTCCCCTGCTGATACAAATCTAGTTTTGAGGGAATTCGAAAAATGTGGTGAGATCTTGAAACACGTTCCTGGTCCAAG
AGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCACACAAGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAG
TGGACCCAATGCATCGGCAGACACTCGATGAAAAGTTAAATAATCCAGGATTCATGGTTATCCCACCTGTATCGTCTCGAACCTCAGAACTCCTTGCAACGAGAGGGCCT
GCACGTCCCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCAGGAGGTACCATTGCCTCGCCATCGAAATCATTAGTGTCTAAGGTAATGGATTTGATGTTTGG
AGTCTAGATTAGCTCCTCTCGGCATATCGATTTTCTGTGGTAAGAAATTCCTAAAAATTTGAGAGCTTACACATTGATTTGGCGTGATATGTTAGATTGTTGTAACTGTG
TACAATGTTCACAGTCCTCCATCTTGACACTTGTGATTGTTTTTCCTGATTCTTACTCTTACAAAATGAGACAGAAGGAAATGAACAATGATGCTGCAACTTCTTTTAGG
CCCTTAAGAACCAACAAATATGGGAACCAGGTATATGGTATATTCCCTCCCCTTTGTTGAAACTGTGTCTTGTGCATCATACCCAACCCAATAAGTCTAGTGGGAATGAA
GATAGGTTGAAATTCTTATCCTCTGTTTCATTACTTGTTTTTTGGGAAATTGGAGATGGGTTCCAGGAAAATAGGTTGCTGCTTGTTCCTTTTCCGATTTAATTTTGTTT
AACATGTTAATGGAATCTTTAAG
Protein sequenceShow/hide protein sequence
MNTVHRTPDSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPLSPEIKSDPRTPIQSHNFSSPMKNKSNASTS
YTPISGQQSRQGSAGFNWWSTSKVGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNYLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDA
NWMHILYQNRSDAHKALNKNGIQINGVLIVGVKPVDPMHRQTLDEKLNNPGFMVIPPVSSRTSELLATRGPARPYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFGV