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Tan0017774 (gene) of Snake gourd v1 genome

Gene IDTan0017774
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionATP synthase subunit 9, mitochondrial
Genome locationLG03:75594165..75594539
RNA-Seq ExpressionTan0017774
SyntenyTan0017774
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008289 - lipid binding (molecular function)
GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domainsIPR000454 - ATP synthase, F0 complex, subunit C
IPR002379 - V-ATPase proteolipid subunit C-like domain
IPR035921 - F/V-ATP synthase subunit C superfamily
IPR038662 - F1F0 ATP synthase subunit C superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7973937.1 hypothetical protein I3843_06G020900 [Carya illinoinensis]4.6e-2164.95Show/hide
Query:  MSWESGN-THDPYQSYTPFSYSFFVTSWKSRRGFLTGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVF
        MSWE      DPYQSYTPF Y FFVTSWKSRRG         +   IGNVF SLIHSV RNPSLAKQSFGYAILGFALT       S    LISSVF
Subjt:  MSWESGN-THDPYQSYTPFSYSFFVTSWKSRRGFLTGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVF

QWQ49909.1 ATPase subunit 9 [Zelkova schneideriana]9.6e-1968.13Show/hide
Query:  TGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIFLKRIVHDAHSIDIV
        TGLSGR   +GIGNVF SLIHSV RNPSLAKQ FGYAILGFALT            LISS+FRSK E   FI  TIFLK+IVH AHSID V
Subjt:  TGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIFLKRIVHDAHSIDIV

WP_131796660.1 ATP synthase subunit C family protein [Candidatus Frankia datiscae]2.3e-2057.52Show/hide
Query:  MSWESGN-THDPYQSYTPFSYSFFVTSWKSRRGFLTGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALTGYCIVCSNDGLLISSVFRSKK
        MSWE G    DPYQSYTPFSYS  +          TGLSGR AA GIGNVF SLIHSV RNPSLAKQSFGYAILGFALT        + +   + F + K
Subjt:  MSWESGN-THDPYQSYTPFSYSFFVTSWKSRRGFLTGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALTGYCIVCSNDGLLISSVFRSKK

Query:  EGFDFIQPTIFLK
          FD I+  I+LK
Subjt:  EGFDFIQPTIFLK

XP_042982981.1 ATP synthase subunit 9, mitochondrial [Carya illinoinensis]5.8e-2465.69Show/hide
Query:  MSWESGN-THDPYQSYTPFSYSFFVTSWKSRRGFLTGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSK
        MSWE      DPYQSYTPF Y FFVTSWKSRRGF        +   IGNVF SLIHSV RNPSLAKQSFGYAILGFALT       S    LISS+FRSK
Subjt:  MSWESGN-THDPYQSYTPFSYSFFVTSWKSRRGFLTGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSK

Query:  KE
         E
Subjt:  KE

YP_009913645.1 ATPase subunit 9 [Luffa acutangula]2.2e-1570Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF
        AA+GIGNVF SLIHSV RNPSLAKQSFGYAILGFALT    +       LISSVFRSKKEGF  I+  +F
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF

TrEMBL top hitse value%identityAlignment
A0A5C2FTY7 ATP synthase subunit 9, mitochondrial3.1e-1570Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF
        AA+GIGNVF SLIHSV RNPSLAKQSFGYAILGFALT            LISSVFRSKKEGF  I+  +F
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF

A0A5C2FV42 ATP synthase subunit 9, mitochondrial3.1e-1570Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF
        AA+GIGNVF SLIHSV RNPSLAKQSFGYAILGFALT            LISSVFRSKKEGF  I+  +F
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF

A0A5N6L5T5 ATP-synt_C domain-containing protein4.1e-1575.38Show/hide
Query:  TGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSK
        TGLSGR AA+GIGNVF SLIHSV RNPSLAKQSFGYAILGFALT    +  S    LISSVFRS+
Subjt:  TGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSK

A0A6B9CPM8 ATP synthase subunit 9, mitochondrial3.1e-1570Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF
        AA+GIGNVF SLIHSV RNPSLAKQSFGYAILGFALT            LISSVFRSKKEGF  I+  +F
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF

A0A7D6ISQ0 ATP synthase subunit 9, mitochondrial1.1e-1570Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF
        AA+GIGNVF SLIHSV RNPSLAKQSFGYAILGFALT    +       LISSVFRSKKEGF  I+  +F
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF

SwissProt top hitse value%identityAlignment
P17254 ATP synthase subunit 9, mitochondrial1.2e-1167.19Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVF---RSKKEG
        AAIGIGNV  S IHSV RNPSLAKQSFGYAILGFALT            LISSV     SKKEG
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVF---RSKKEG

P60113 ATP synthase subunit 9, mitochondrial9.0e-1294.59Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT
        AAIGIGNVF SLIHSV RNPSLAKQSFGYAILGFALT
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT

P60117 ATP synthase subunit 9, mitochondrial3.4e-1170.91Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVF
        AAIGIGNVF SLIHSV RNPSLAKQ FGYAILGFALT    +       LIS VF
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVF

P60118 ATP synthase subunit 9, mitochondrial3.4e-1170.91Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVF
        AAIGIGNVF SLIHSV RNPSLAKQ FGYAILGFALT    +       LIS VF
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVF

Q37550 ATP synthase subunit 9, mitochondrial2.8e-1375.44Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRS
        AAIGIGNVF SLIHSV RNPSLAKQSFGYAILGFALT            LISSVFRS
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT-GYCIVCSNDGLLISSVFRS

Arabidopsis top hitse value%identityAlignment
AT2G07671.1 ATP synthase subunit C family protein6.4e-1394.59Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT
        AAIGIGNVF SLIHSV RNPSLAKQSFGYAILGFALT
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT

ATMG00040.1 ATP synthase subunit C family protein8.4e-0591.3Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLA
        AAIGIGNVF SLIHSV RNPSLA
Subjt:  AAIGIGNVFDSLIHSVTRNPSLA

ATMG01080.1 mitochondrial F0-ATPase subunit 96.4e-1394.59Show/hide
Query:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT
        AAIGIGNVF SLIHSV RNPSLAKQSFGYAILGFALT
Subjt:  AAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGGAGTCAGGCAACACACACGACCCATACCAATCCTACACTCCTTTCTCCTATTCTTTCTTTGTCACTTCTTGGAAATCACGAAGAGGATTCCTGACCGGACT
GAGCGGGAGGAGAGCTGCGATCGGTATTGGAAACGTGTTCGATTCTTTGATCCATTCCGTGACGCGAAATCCATCATTGGCTAAACAATCATTTGGTTATGCCATTTTGG
GCTTTGCTCTAACCGGCTATTGCATTGTTTGCTCCAATGATGGCCTTTTGATCTCATCCGTATTCCGATCGAAGAAAGAAGGTTTCGATTTCATTCAACCAACTATCTTT
TTGAAGCGGATAGTTCACGATGCTCATTCTATAGATATCGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGGGAGTCAGGCAACACACACGACCCATACCAATCCTACACTCCTTTCTCCTATTCTTTCTTTGTCACTTCTTGGAAATCACGAAGAGGATTCCTGACCGGACT
GAGCGGGAGGAGAGCTGCGATCGGTATTGGAAACGTGTTCGATTCTTTGATCCATTCCGTGACGCGAAATCCATCATTGGCTAAACAATCATTTGGTTATGCCATTTTGG
GCTTTGCTCTAACCGGCTATTGCATTGTTTGCTCCAATGATGGCCTTTTGATCTCATCCGTATTCCGATCGAAGAAAGAAGGTTTCGATTTCATTCAACCAACTATCTTT
TTGAAGCGGATAGTTCACGATGCTCATTCTATAGATATCGTGTAA
Protein sequenceShow/hide protein sequence
MSWESGNTHDPYQSYTPFSYSFFVTSWKSRRGFLTGLSGRRAAIGIGNVFDSLIHSVTRNPSLAKQSFGYAILGFALTGYCIVCSNDGLLISSVFRSKKEGFDFIQPTIF
LKRIVHDAHSIDIV