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Tan0017781 (gene) of Snake gourd v1 genome

Gene IDTan0017781
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionWD40 repeat-containing protein HOS15
Genome locationLG11:2395107..2397926
RNA-Seq ExpressionTan0017781
SyntenyTan0017781
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027035.1 WD40 repeat-containing protein HOS15 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-3582.42Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKLRAFFRALGS---NFLL
        KQQFEFH+GPTLDVDWRNNVSFATSSTDNMIFVCKIGET PIKTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+    +  GS   NFL+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKLRAFFRALGS---NFLL

PKI41252.1 hypothetical protein CRG98_038364 [Punica granatum]1.3e-3492Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET P+KTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

XP_030455779.1 WD40 repeat-containing protein HOS15 [Syzygium oleosum]4.3e-3590.91Show/hide
Query:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        +GKQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGE  PIKTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+
Subjt:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

XP_039012509.1 WD40 repeat-containing protein HOS15-like [Hibiscus syriacus]9.6e-3593.33Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET PIKTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

XP_039069758.1 WD40 repeat-containing protein HOS15-like [Hibiscus syriacus]9.6e-3593.33Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET PIKTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

TrEMBL top hitse value%identityAlignment
A0A151QZK0 F-box-like/WD repeat-containing protein TBL1XR1-B6.1e-3590.67Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFH+GPTLDVDWRNNVSFATSSTDNMI+VCK+GE+HPIKTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

A0A218XCN9 WD40 repeat-containing protein HOS156.1e-3592Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET P+KTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

A0A2I0IB79 WD_REPEATS_REGION domain-containing protein6.1e-3592Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFHTGPTLDVDWRNNVSFATSSTDNMI+VCKIGET P+KTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

A0A6J1KNQ2 WD40 repeat-containing protein HOS15-like isoform X26.1e-3593.33Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFH+GPTLDVDWRNNVSFATSSTDNMIFVCKIGET PIKTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

A0A6J1KRB1 WD40 repeat-containing protein HOS15-like isoform X16.1e-3593.33Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFH+GPTLDVDWRNNVSFATSSTDNMIFVCKIGET PIKTFAGHQGEVNCVKW+PTGSLLASCSDDIT K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

SwissProt top hitse value%identityAlignment
Q6GPC6 F-box-like/WD repeat-containing protein TBL1XR1-B7.2e-2562.34Show/hide
Query:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        + KQQF FH+ P LDVDW++N +FA+ STD  I VCK+G+  PIKTF GH  EVN +KW+PTG+LLASCSDD+T K+
Subjt:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

Q7SZM9 F-box-like/WD repeat-containing protein TBL1XR1-A7.2e-2562.34Show/hide
Query:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        + KQQF FH+ P LDVDW++N +FA+ STD  I VCK+G+  PIKTF GH  EVN +KW+PTG+LLASCSDD+T K+
Subjt:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

Q9BQ87 F-box-like/WD repeat-containing protein TBL1Y5.5e-2561.04Show/hide
Query:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        + KQQF FH+ P LDVDW+NN++FA+ STD  I VC++G  HP+KTF GH  EVN +KW+P+G LLASCSDD+T K+
Subjt:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

Q9BZK7 F-box-like/WD repeat-containing protein TBL1XR17.2e-2562.34Show/hide
Query:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        + KQQF FH+ P LDVDW++N +FA+ STD  I VCK+G+  PIKTF GH  EVN +KW+PTG+LLASCSDD+T K+
Subjt:  KGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

Q9FN19 WD40 repeat-containing protein HOS151.7e-3485.33Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFH+GPTLDVDWRNNVSFATSSTD+MI++CKIGET P KTF GHQGEVNCVKW+PTGSLLASCSDD T K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

Arabidopsis top hitse value%identityAlignment
AT2G26060.1 Transducin/WD40 repeat-like superfamily protein1.4e-0437.68Show/hide
Query:  EFHTGPTLDVDWR-NNVSFATSSTDNMIFVCKI--GETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDD
        E HT       W  +    AT+S D    + K    E   I T  GH+ EV  V WN +GS LA+CS D
Subjt:  EFHTGPTLDVDWR-NNVSFATSSTDNMIFVCKI--GETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDD

AT2G26060.2 Transducin/WD40 repeat-like superfamily protein1.4e-0437.68Show/hide
Query:  EFHTGPTLDVDWR-NNVSFATSSTDNMIFVCKI--GETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDD
        E HT       W  +    AT+S D    + K    E   I T  GH+ EV  V WN +GS LA+CS D
Subjt:  EFHTGPTLDVDWR-NNVSFATSSTDNMIFVCKI--GETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDD

AT5G25150.1 TBP-associated factor 56.5e-0533.33Show/hide
Query:  FATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        FA+ S D    +  +    P++  AGH  +V+CV+W+P  + +A+ S D T +L
Subjt:  FATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL

AT5G64730.1 Transducin/WD40 repeat-like superfamily protein4.2e-0432.08Show/hide
Query:  NNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDD
        +N  F +   D  ++   +     I+ F GH GEVN VK+N + S++ S   D
Subjt:  NNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDD

AT5G67320.1 WD-40 repeat family protein1.2e-3585.33Show/hide
Query:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL
        KQQFEFH+GPTLDVDWRNNVSFATSSTD+MI++CKIGET P KTF GHQGEVNCVKW+PTGSLLASCSDD T K+
Subjt:  KQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTCAAAGGGAAGCAACAGTTTGAATTTCATACAGGTCCAACACTTGATGTTGATTGGCGCAACAATGTATCATTTGCAACAAGTTCCACAGATAACATGATATT
TGTCTGCAAAATTGGAGAGACTCATCCTATTAAAACTTTTGCAGGACATCAGGGTGAAGTGAATTGTGTCAAGTGGAATCCCACAGGATCATTGTTGGCTTCGTGTTCTG
ATGATATCACAACTAAGTTGAGGGCCTTCTTTCGAGCTCTAGGAAGTAACTTCTTGCTTGCACAATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTCAAAGGGAAGCAACAGTTTGAATTTCATACAGGTCCAACACTTGATGTTGATTGGCGCAACAATGTATCATTTGCAACAAGTTCCACAGATAACATGATATT
TGTCTGCAAAATTGGAGAGACTCATCCTATTAAAACTTTTGCAGGACATCAGGGTGAAGTGAATTGTGTCAAGTGGAATCCCACAGGATCATTGTTGGCTTCGTGTTCTG
ATGATATCACAACTAAGTTGAGGGCCTTCTTTCGAGCTCTAGGAAGTAACTTCTTGCTTGCACAATCATAGTTTGAAAATGTGGTATGTTATCTTTCTCCCTACACTTAG
GTAAACTTCAATGTGAATGTTCCTCATTTTTCACCAATGACTATGAAAACAACAATCCATGAGATAGATAAGAACAATCTTCACTTCAAGTTGGGTCTACTTTAACTTAT
TCTTAACTAAAATTACCGGTATAAATTGAGTTTATGAAAATCTTCTTTTTTAATATGTTTTTACTGGTTACGGCGATGGAGTTTGGTTTGGTTATCTAGTTATTGAATTT
TTATAAGTGTGTTTTTACTTAAAT
Protein sequenceShow/hide protein sequence
MPLKGKQQFEFHTGPTLDVDWRNNVSFATSSTDNMIFVCKIGETHPIKTFAGHQGEVNCVKWNPTGSLLASCSDDITTKLRAFFRALGSNFLLAQS