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Tan0017800 (gene) of Snake gourd v1 genome

Gene IDTan0017800
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG03:56486128..56494065
RNA-Seq ExpressionTan0017800
SyntenyTan0017800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032871.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.2e-0545.28Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE
        M+ELQ   T E SQPL+E+EI   VLG RLG+ KG+ WG KPK  R     +SS+SC +   +E EL  +L       +++ KN Q    Q E M    E
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE

Query:  ELTRAQ
        ELTRAQ
Subjt:  ELTRAQ

KAA0035069.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.7e-0557.69Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRLTSSSS
        M+ELQ   T E SQPL+E+EI   VLG RLG+ KG+ WG KPK  ++TS+SS
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRLTSSSS

KAA0043188.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.2e-0544.34Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE
        M+ELQ   T E SQPL+E+EI   VLG R G+ KG+ WG KPK  R+    +SS+SC + I +E EL  +L       +++ +N Q    Q E M    E
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE

Query:  ELTRAQ
        ELTRAQ
Subjt:  ELTRAQ

KAA0048279.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.7e-0541.51Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRLTSSSSCG---------EIRREHELTVELEKLRTKNE------QQKEEMNMTKE
        M+E+Q   T E SQPL+E+EI   VLG RLG++KG+ WG KPK  R  S+SS           EI  + +L   LE++  ++        Q E M    E
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRLTSSSSCG---------EIRREHELTVELEKLRTKNE------QQKEEMNMTKE

Query:  ELTRAQ
        ELTRAQ
Subjt:  ELTRAQ

TYK09403.1 zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa]2.2e-0545.28Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE
        M+ELQ   T E SQPL+E+EI   VLG RLG+ KG+ WG KPK  R     +SS+SC +   +E EL  +L       +++ KN Q    Q E M    E
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE

Query:  ELTRAQ
        ELTRAQ
Subjt:  ELTRAQ

TrEMBL top hitse value%identityAlignment
A0A5A7STL8 CACTA en-spm transposon protein1.1e-0545.28Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE
        M+ELQ   T E SQPL+E+EI   VLG RLG+ KG+ WG KPK  R     +SS+SC +   +E EL  +L       +++ KN Q    Q E M    E
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE

Query:  ELTRAQ
        ELTRAQ
Subjt:  ELTRAQ

A0A5A7TK56 CACTA en-spm transposon protein1.1e-0544.34Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE
        M+ELQ   T E SQPL+E+EI   VLG R G+ KG+ WG KPK  R+    +SS+SC + I +E EL  +L       +++ +N Q    Q E M    E
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE

Query:  ELTRAQ
        ELTRAQ
Subjt:  ELTRAQ

A0A5A7U4B0 CACTA en-spm transposon protein8.1e-0641.51Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRLTSSSSCG---------EIRREHELTVELEKLRTKNE------QQKEEMNMTKE
        M+E+Q   T E SQPL+E+EI   VLG RLG++KG+ WG KPK  R  S+SS           EI  + +L   LE++  ++        Q E M    E
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRLTSSSSCG---------EIRREHELTVELEKLRTKNE------QQKEEMNMTKE

Query:  ELTRAQ
        ELTRAQ
Subjt:  ELTRAQ

A0A5D3BWX1 CACTA en-spm transposon protein8.1e-0657.69Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRLTSSSS
        M+ELQ   T E SQPL+E+EI   VLG RLG+ KG+ WG KPK  ++TS+SS
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRLTSSSS

A0A5D3CC25 Zinc finger protein ZPR1-like protein1.1e-0545.28Show/hide
Query:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE
        M+ELQ   T E SQPL+E+EI   VLG RLG+ KG+ WG KPK  R     +SS+SC +   +E EL  +L       +++ KN Q    Q E M    E
Subjt:  MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRL----TSSSSCGE-IRREHELTVELE------KLRTKNEQ----QKEEMNMTKE

Query:  ELTRAQ
        ELTRAQ
Subjt:  ELTRAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAATTGCAGGAGACATCCACATCAGAAAGGTCTCAACCACTTGCAGAAGAGGAGATTATTATGATTGTTTTAGGTCTGCGACTGGGCCATGTAAAAGGCATGAG
GTGGGGACGGAAGCCAAAAAAAGGGAGATTGACTTCCTCGTCATCATGTGGAGAAATAAGACGTGAACATGAGTTGACAGTGGAATTAGAAAAACTACGTACGAAAAACG
AACAACAGAAGGAAGAGATGAATATGACAAAGGAAGAGTTGACGCGTGCCCAAACTTTTATTCAGCGTACGAGAGAAGAGTTCGAGACCCGAACTACAACACAAGATGCG
AAGTTGGCTAGCATGGAAGCAATGCTTATGAAATTTATGCATTCACAGGGAGAACCGCCGAAATAG
mRNA sequenceShow/hide mRNA sequence
CTTCCCCTTTCTCTCTCCTTCAACCCACTGATACTGTCGTCGCCTGCTGTCTACACGCCGCTGTCTGCACACCGCAATCGCCCGCCGTCTGCATTTGGAGGTTTCCTCGA
GCGTGGTTCAGCAGAAGGAGCTATCATGCACGTCAATGGCGGACGATCTTCTTTCTCAGAGAGATAATGGTGACACATTGCAATCTAGAGAACGAGGCGGCTGAGCATTT
TGTCGATGATGACCCTATTGTTGATCCTAGTGCCACCGCAGTGTCCTCTATTGGCGATACGTCAGGTAATTTACACGTAGAGGAGGAAGAGGATATACTAAAGGCAAAGA
GTTGGAGAAATATGTGAGCATTCATAGGAAGATTCCGATAGAAATAACCGAAGAGTTGAACAAGCCTGTATGTGACTTTGCTACAAAGTTCAGTAGCTAGATATGGACGA
TTGTGAGAGAGTTTTTTCCAGTACGTCTATCAAAGTGGAAAGAAGTGACAACCGAATTAAAGGACCATGTTAAGAACAAACTCTTGGTAAGTTTAGGGGCTACCAAATTT
TCTATCAAAGTGTTTATGATGCTCAGTTGTACCTAAGTTGACTAATATCCTTTATTTTTTGTGCAAACACATTTCGAGCTAGATTATTCTCAGTTCGTTGTCCACCAGTT
TATTGAACGTCAAATGAAGTCAATCATCAAGGAGTATAGGGCAGAATTGGTCGAACATTACAGAAAGTATTCTCCTAAGGAGACGCGTGCACACCCAAATGATCGTGTGG
TTGATATAGTTGATTGACACTTGCTATGTAATAGGTGGGAGAGTGATGACTTTAAGAAAATTGCTGAAATAAATAAAAAGAACCGAGCAAAGCTACCTTGGAACCATTGC
GCTGGGTCCAAGTCATTCCTACATATACAAGAAGCAAAAGTAGTGTTGTAGAAATGCTTATCTTTTGCCCTTTTTTTTTATTTAGTAAATAATACTAATATATATATATA
TTAAAAACTTTGATTCATAGAAAAAAAAATGGTAAACAAATAGGACTAATTGAGTTGTTTCAAGAAACCAGATACAAAGAAGGGAAAAGGTGGGTGAATCCGGAAGCCGT
TGTTGCTCATAGTAAAATGATAGAATTGCAGGAGACATCCACATCAGAAAGGTCTCAACCACTTGCAGAAGAGGAGATTATTATGATTGTTTTAGGTCTGCGACTGGGCC
ATGTAAAAGGCATGAGGTGGGGACGGAAGCCAAAAAAAGGGAGATTGACTTCCTCGTCATCATGTGGAGAAATAAGACGTGAACATGAGTTGACAGTGGAATTAGAAAAA
CTACGTACGAAAAACGAACAACAGAAGGAAGAGATGAATATGACAAAGGAAGAGTTGACGCGTGCCCAAACTTTTATTCAGCGTACGAGAGAAGAGTTCGAGACCCGAAC
TACAACACAAGATGCGAAGTTGGCTAGCATGGAAGCAATGCTTATGAAATTTATGCATTCACAGGGAGAACCGCCGAAATAGATTGCCAGTTAAATTAATGAAGGAAAGC
CTCTTTTGGAAAGCTAGTTTAACCAGTTGTGAATCATGCTTCAAGGAATCAAGCAGATAGGTTGACACTAACTTTTGGAAATTTTTGAACAAAAAAATGTAATCAAATTT
GTGCTTAATTACTTATGTAAAGTGATG
Protein sequenceShow/hide protein sequence
MIELQETSTSERSQPLAEEEIIMIVLGLRLGHVKGMRWGRKPKKGRLTSSSSCGEIRREHELTVELEKLRTKNEQQKEEMNMTKEELTRAQTFIQRTREEFETRTTTQDA
KLASMEAMLMKFMHSQGEPPK