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Tan0017833 (gene) of Snake gourd v1 genome

Gene IDTan0017833
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:72233166..72233725
RNA-Seq ExpressionTan0017833
SyntenyTan0017833
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647506.1 hypothetical protein Csa_003725 [Cucumis sativus]3.9e-0954.02Show/hide
Query:  SSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNP----ETATSPTSNSGSGDGAR-GGVVFTMASGPSRKGAGH
        SS LLI+ +IAA RF L VDCRPLR GS   RH +++N S+  H+ P    + AT+P  +     G   GGV FTMASGPSRKGAGH
Subjt:  SSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNP----ETATSPTSNSGSGDGAR-GGVVFTMASGPSRKGAGH

KAG6595007.1 hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1569.77Show/hide
Query:  SSSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNPET-ATSPTSNSG--SGDGARGGVVFTMASGPSRKGAGH
        SSSLLLI+A+IAAT F LLVD RPLRSGST+Q HPI  NN SAL + PET A SPTS+S      G  GGVVFT+ SGPSRKGAGH
Subjt:  SSSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNPET-ATSPTSNSG--SGDGARGGVVFTMASGPSRKGAGH

KAG6604156.1 hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1160.24Show/hide
Query:  SSSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNPETATSPTSNSGSGDGARGGVVFTMASGPSRKGAGH
        +SSLLLIM ++AATRF  LVDCRPLRSGST +      NN SA+  +   A+SP  +SGS     GGV FT+ASGPSRKGAGH
Subjt:  SSSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNPETATSPTSNSGSGDGARGGVVFTMASGPSRKGAGH

TYK12856.1 hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]1.8e-0957.47Show/hide
Query:  SSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNPETATSPTSNSGSGDGAR-----GGVVFTMASGPSRKGAGH
        SS LLI+ ++AA RF L VDCRPLR GS   RH + +N S+  HD PET  + T+   SG G R     GGV FTMASGPSRKGAGH
Subjt:  SSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNPETATSPTSNSGSGDGAR-----GGVVFTMASGPSRKGAGH

TrEMBL top hitse value%identityAlignment
A0A5D3CR30 Uncharacterized protein8.5e-1057.47Show/hide
Query:  SSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNPETATSPTSNSGSGDGAR-----GGVVFTMASGPSRKGAGH
        SS LLI+ ++AA RF L VDCRPLR GS   RH + +N S+  HD PET  + T+   SG G R     GGV FTMASGPSRKGAGH
Subjt:  SSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNPETATSPTSNSGSGDGAR-----GGVVFTMASGPSRKGAGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAAGCCCAACATGATCAGGATCTCCTCCTCTTTACTTCTAATCATGGCGATAATCGCCGCCACACGGTTCTCTCTTCTCGTAGATTGCAGACCGCTCCGATCCGG
TTCAACAGATCAGCGCCACCCCATCAATAATAATAATAGCTCTGCTCTTCACGACAACCCGGAAACAGCCACATCGCCCACGAGCAATTCCGGAAGCGGAGACGGAGCTC
GCGGTGGCGTAGTGTTTACGATGGCTTCGGGACCGAGCAGGAAGGGTGCTGGCCATTAA
mRNA sequenceShow/hide mRNA sequence
GATATGCATATGCCAAACCCAAACCCAAACAAAATCCTTTTTTTCTTTTTCGTCCTCCATTCTTTTTTCTCTCATCGCCGAATCTAAATTCTCCGGCGAATGCCTAAGCC
CAACATGATCAGGATCTCCTCCTCTTTACTTCTAATCATGGCGATAATCGCCGCCACACGGTTCTCTCTTCTCGTAGATTGCAGACCGCTCCGATCCGGTTCAACAGATC
AGCGCCACCCCATCAATAATAATAATAGCTCTGCTCTTCACGACAACCCGGAAACAGCCACATCGCCCACGAGCAATTCCGGAAGCGGAGACGGAGCTCGCGGTGGCGTA
GTGTTTACGATGGCTTCGGGACCGAGCAGGAAGGGTGCTGGCCATTAAACCAAGCATATTCTTTGCCCATTTCATATTGCCAAATCTTGGCTTTATTATTTTTTTTTTTT
GGGTTATTTACACGCAATTTTCTTACTGTGTATACATTTTTTCCCCTTCCCGTCTGTACTTTCAAAATGTATATCTTAGTTCTACGTAGCTCTACTTTAGTTCTTACTAC
TAATTTCTCA
Protein sequenceShow/hide protein sequence
MPKPNMIRISSSLLLIMAIIAATRFSLLVDCRPLRSGSTDQRHPINNNNSSALHDNPETATSPTSNSGSGDGARGGVVFTMASGPSRKGAGH