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Tan0017860 (gene) of Snake gourd v1 genome

Gene IDTan0017860
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG09:29080721..29081149
RNA-Seq ExpressionTan0017860
SyntenyTan0017860
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]2.9e-3554.74Show/hide
Query:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDF
        M SS  L  S+ ++L   L+  +E ISLLPETTVT +N++   +L +HCRSK +DLGV+V+  + SYSF F+PNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGIYNVCFPWN
         RD   CT+CRW +Y  GPCL H  +T I   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGIYNVCFPWN

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]4.1e-3454.96Show/hide
Query:  LALSVLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR
        L  S+ ++L   L+  +E ISLLPETTVT +N++   +L +HCRSK +DLGV+V+  + SYSF F+PNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGIYNVCFPWN
        CT+CRW +Y  GPCL H  +T I   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGIYNVCFPWN

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]2.1e-3354.33Show/hide
Query:  VLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
        + ++L   L+  +E ISLLPETTV  +N++   +L +HCRSK +DLGV+V+ P+ SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  VLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGIYNVCFPWN
        RW IY  GPCL H K +     CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGIYNVCFPWN

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]6.0e-3358.77Show/hide
Query:  ESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLH
        E ISLLPETTVT +N++   +L +HCRSK +DLGV+V+  + SYSF F+PN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y  GPCL H
Subjt:  ESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLH

Query:  PKDTGIYNVCFPWN
          +T I   CFPWN
Subjt:  PKDTGIYNVCFPWN

KAA0059242.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.1e-2345.45Show/hide
Query:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKL-VDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHN---FA
        M  S TLALS+L+     L   + SI + P TTV  +N++  D+ ++VHC+SK++DLGVHVL     YSF F+PN+ GTTLF CSF W   G H    F 
Subjt:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKL-VDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHN---FA

Query:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGIYNVCFPWNYK
        I+D  RDA +CT CRW I+    CL  PK+ G  ++C+ +  K
Subjt:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGIYNVCFPWNYK

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog2.9e-3358.77Show/hide
Query:  ESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLH
        E ISLLPETTVT +N++   +L +HCRSK +DLGV+V+  + SYSF F+PN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y  GPCL H
Subjt:  ESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLH

Query:  PKDTGIYNVCFPWN
          +T I   CFPWN
Subjt:  PKDTGIYNVCFPWN

A0A5A7TWM4 Putative mitochondrial protein5.5e-2445.45Show/hide
Query:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKL-VDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHN---FA
        M SS TLALS+L++    L   + SI + P TTV  +N++   + ++VHC+SK++DLGVHVL     YSF F+PN+ GTTLF CSF W   G H    F 
Subjt:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKL-VDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHN---FA

Query:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGIYNVCFPWNYK
        I+D  RDA +CT CRW I+    CL  PK+ G  ++C+ +  K
Subjt:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGIYNVCFPWNYK

A0A5A7TXE8 S-protein homolog1.0e-3354.33Show/hide
Query:  VLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
        + ++L   L+  +E ISLLPETTV  +N++   +L +HCRSK +DLGV+V+ P+ SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  VLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGIYNVCFPWN
        RW IY  GPCL H K +     CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGIYNVCFPWN

B0F817 S-protein homolog1.4e-3554.74Show/hide
Query:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDF
        M SS  L  S+ ++L   L+  +E ISLLPETTVT +N++   +L +HCRSK +DLGV+V+  + SYSF F+PNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGIYNVCFPWN
         RD   CT+CRW +Y  GPCL H  +T I   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGIYNVCFPWN

B0F818 S-protein homolog2.0e-3454.96Show/hide
Query:  LALSVLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR
        L  S+ ++L   L+  +E ISLLPETTVT +N++   +L +HCRSK +DLGV+V+  + SYSF F+PNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGIYNVCFPWN
        CT+CRW +Y  GPCL H  +T I   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGIYNVCFPWN

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.6e-1744Show/hide
Query:  LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGIYNVCFPWN
        L L  HC+SKD+DLG   L P  S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+GPC  +  +T  +++C+PWN
Subjt:  LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGIYNVCFPWN

F4JZG1 S-protein homolog 41.4e-1641.88Show/hide
Query:  ETTVTTINKLVD-LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ VT  N+L D   L +HC+S D+DLG+ +L P  S+SF F+P+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTVTTINKLVD-LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTGIYNVCFPWNYKTR
         D   +N+C+ WN   R
Subjt:  KDTGIYNVCFPWNYKTR

O23020 S-protein homolog 51.4e-2146.67Show/hide
Query:  TTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGIYN
        T VT  N +    L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L  K      
Subjt:  TTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGIYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

P0DN93 S-protein homolog 297.2e-1331.69Show/hide
Query:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKL-VDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYD
        M +SS + + + ++LF  ++      +   +T VT  N +     L++ CRSKD+DLG H+L    ++ + F+P+ + TTLF+C F+W       F  Y 
Subjt:  MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKL-VDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYD

Query:  FHRDANRCTDCRWEIYRDGPCLLHPKDTGIYNV----CFPWN
          RD   C  C W I  D  C+     +G +N     C+PWN
Subjt:  FHRDANRCTDCRWEIYRDGPCLLHPKDTGIYNV----CFPWN

Q9FMQ4 S-protein homolog 33.9e-1942.48Show/hide
Query:  VTTINKLVD-LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTG
        V   N+L D L L++HC+S D+DLG+ +L P  S+SF F+ ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D  
Subjt:  VTTINKLVD-LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTG

Query:  IYNVCFPWNYKTR
         +N+C+ WN   R
Subjt:  IYNVCFPWNYKTR

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.0e-2246.67Show/hide
Query:  TTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGIYN
        T VT  N +    L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L  K      
Subjt:  TTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGIYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

AT3G16970.1 Plant self-incompatibility protein S1 family2.4e-1942.48Show/hide
Query:  PETTVTTINKL-VDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDAN----RCTDCRWEIYRDGPCLLHP
        P TTV   N L   L L  HC+SK++DLG   +    ++SF F+P+V+G TLF C F+W +   H F IY   RD       C  C W+I +DGPC L+ 
Subjt:  PETTVTTINKL-VDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDAN----RCTDCRWEIYRDGPCLLHP

Query:  KDTGIYNVCFPWN
        K++ +++VC PWN
Subjt:  KDTGIYNVCFPWN

AT4G16195.1 Plant self-incompatibility protein S1 family1.2e-1844Show/hide
Query:  LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGIYNVCFPWN
        L L  HC+SKD+DLG   L P  S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+GPC  +  +T  +++C+PWN
Subjt:  LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGIYNVCFPWN

AT5G12060.1 Plant self-incompatibility protein S1 family2.8e-2042.48Show/hide
Query:  VTTINKLVD-LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTG
        V   N+L D L L++HC+S D+DLG+ +L P  S+SF F+ ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D  
Subjt:  VTTINKLVD-LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTG

Query:  IYNVCFPWNYKTR
         +N+C+ WN   R
Subjt:  IYNVCFPWNYKTR

AT5G12070.1 Plant self-incompatibility protein S1 family9.9e-1841.88Show/hide
Query:  ETTVTTINKLVD-LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ VT  N+L D   L +HC+S D+DLG+ +L P  S+SF F+P+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTVTTINKLVD-LVLSVHCRSKDNDLGVHVLDPETSYSFTFKPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTGIYNVCFPWNYKTR
         D   +N+C+ WN   R
Subjt:  KDTGIYNVCFPWNYKTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATCGTCAACGCTAGCACTTTCCGTCTTGGTAATGTTATTTACAGGTCTAAATTATTTTGAAGAATCAATCTCACTTCTGCCAGAAACTACAGTGACAACTAT
TAATAAACTGGTCGACCTAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCCAGAAACAAGCTACTCCTTTACCTTTAAACCCA
ATGTTTGGGGGACAACGTTGTTTTCTTGTAGCTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAATTTATAATGTTTGCTTTCCTTGGAACTATAAAACAAGATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATCGTCAACGCTAGCACTTTCCGTCTTGGTAATGTTATTTACAGGTCTAAATTATTTTGAAGAATCAATCTCACTTCTGCCAGAAACTACAGTGACAACTAT
TAATAAACTGGTCGACCTAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCCAGAAACAAGCTACTCCTTTACCTTTAAACCCA
ATGTTTGGGGGACAACGTTGTTTTCTTGTAGCTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAATTTATAATGTTTGCTTTCCTTGGAACTATAAAACAAGATTATAA
Protein sequenceShow/hide protein sequence
MDSSSTLALSVLVMLFTGLNYFEESISLLPETTVTTINKLVDLVLSVHCRSKDNDLGVHVLDPETSYSFTFKPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
RWEIYRDGPCLLHPKDTGIYNVCFPWNYKTRL