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Tan0017891 (gene) of Snake gourd v1 genome

Gene IDTan0017891
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHeavy metal transport/detoxification superfamily protein
Genome locationLG11:2412763..2413194
RNA-Seq ExpressionTan0017891
SyntenyTan0017891
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646572.1 hypothetical protein Csa_004951, partial [Cucumis sativus]9.1e-2890.54Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTNY
        VVELKVFLHCEECIKKILKAIKKIQDIETYNVDM++NKVIVTGNVT EEVIKVLQKI KTAIPWQ DE+NN NY
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTNY

XP_004138408.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus]1.3e-2990.91Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTNY
        MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDM++NKVIVTGNVT EEVIKVLQKI KTAIPWQ DE+NN NY
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTNY

XP_008456748.1 PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo]9.1e-2889.19Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN
        MANVVELKVFLHC+ECIKKILKAIKKIQDIETYNVDM++NKVIVTGNVT EEVIKVLQKI KTA+PWQ DE+NN
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN

XP_022133451.1 copper transport protein ATX1 [Momordica charantia]9.1e-2893.24Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN
        MANVVELKV LHCE+CIKKILKAIKKIQDIETYNVD QLNKV VTGNVTTEEVIKVL KISKTAIPWQADEVNN
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN

XP_038884077.1 copper transport protein ATX1 [Benincasa hispida]5.4e-2891.89Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN
        MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDM++NKVIVTGNVT EEVIKVLQKI KTAIPWQAD +NN
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN

TrEMBL top hitse value%identityAlignment
A0A0A0K8N1 HMA domain-containing protein6.2e-3090.91Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTNY
        MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDM++NKVIVTGNVT EEVIKVLQKI KTAIPWQ DE+NN NY
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTNY

A0A1S3C423 superoxide dismutase 1 copper chaperone4.4e-2889.19Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN
        MANVVELKVFLHC+ECIKKILKAIKKIQDIETYNVDM++NKVIVTGNVT EEVIKVLQKI KTA+PWQ DE+NN
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN

A0A2N9J4M6 HMA domain-containing protein1.1e-2380.82Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVN
        M NVVELKV LHCEECIKKILKAIKK++DIETYNVD QLNKVIVTGN+TTEEVI+VLQKI K+A  W+ DE+N
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVN

A0A5D3C2A2 Superoxide dismutase 1 copper chaperone3.2e-2688.73Show/hide
Query:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN
        VVELKVFLHC+ECIKKILKAIKKIQDIETYNVDM++NKVIVTGNVT EEVIKVLQKI KTA+PWQ DE+NN
Subjt:  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN

A0A6J1BV52 copper transport protein ATX14.4e-2893.24Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN
        MANVVELKV LHCE+CIKKILKAIKKIQDIETYNVD QLNKV VTGNVTTEEVIKVL KISKTAIPWQADEVNN
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 459.2e-0740Show/hide
Query:  NVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPW
        ++VEL V + C+ C KK+ +AI K+  ++T  +D+   KV VTG V  EEV+K++++  +TA  W
Subjt:  NVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPW

F4JZL7 Heavy metal-associated isoprenylated plant protein 336.0e-0640Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN
        LKV +HC+ C +K+ K ++KI+ + T  +D +L KV V+GNV    +IK L K  K A  W A +  + N
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN

Q84J88 Heavy metal-associated isoprenylated plant protein 367.1e-0741.43Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN
        L+V +HCE C +KI K + KI  + T N+D++  KV V GNV  E +IK + K  + A  W     NN N
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN

Q94BT9 Copper transport protein ATX13.9e-0531.43Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQAD
        M+  V L+V + CE C+  + + + K++ +E+++VD++  KV V GNV  + V++ + K  K    W+A+
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQAD

Q9M8K5 Heavy metal-associated isoprenylated plant protein 322.3e-0539.71Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN
        LKV +HC+ C +K+ K ++KI+ + T  +D +  KV V+G+V    +IK L K  K A  W A + NN
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNN

Arabidopsis top hitse value%identityAlignment
AT3G56891.1 Heavy metal transport/detoxification superfamily protein6.6e-0840Show/hide
Query:  NVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPW
        ++VEL V + C+ C KK+ +AI K+  ++T  +D+   KV VTG V  EEV+K++++  +TA  W
Subjt:  NVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPW

AT5G05365.1 Heavy metal transport/detoxification superfamily protein2.5e-2374.29Show/hide
Query:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQAD
        MANVVELKV LHC+ECI+KILKAIKKI+DIE Y+VD QLNKV VTGNVT E+VI+VLQK+ K A+ W  D
Subjt:  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQAD

AT5G19090.1 Heavy metal transport/detoxification superfamily protein4.3e-0740Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN
        LKV +HC+ C +K+ K ++KI+ + T  +D +L KV V+GNV    +IK L K  K A  W A +  + N
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN

AT5G19090.2 Heavy metal transport/detoxification superfamily protein4.3e-0740Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN
        LKV +HC+ C +K+ K ++KI+ + T  +D +L KV V+GNV    +IK L K  K A  W A +  + N
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN

AT5G27690.1 Heavy metal transport/detoxification superfamily protein5.0e-0841.43Show/hide
Query:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN
        L+V +HCE C +KI K + KI  + T N+D++  KV V GNV  E +IK + K  + A  W     NN N
Subjt:  LKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATGTGGTGGAATTGAAGGTTTTTTTGCATTGTGAGGAGTGCATCAAGAAGATTCTCAAAGCCATCAAAAAAATTCAAGATATAGAGACATATAATGTAGATAT
GCAGCTGAATAAGGTGATTGTTACAGGCAATGTCACTACAGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGCAAGACAGCAATTCCATGGCAAGCTGATGAAGTCAACA
ACACCAATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATGTGGTGGAATTGAAGGTTTTTTTGCATTGTGAGGAGTGCATCAAGAAGATTCTCAAAGCCATCAAAAAAATTCAAGATATAGAGACATATAATGTAGATAT
GCAGCTGAATAAGGTGATTGTTACAGGCAATGTCACTACAGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGCAAGACAGCAATTCCATGGCAAGCTGATGAAGTCAACA
ACACCAATTACTAG
Protein sequenceShow/hide protein sequence
MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEEVIKVLQKISKTAIPWQADEVNNTNY