CuGenDBv2

Gene ID	Tan0017915
Organism	Trichosanthes anguina (Snake gourd v1)
Description	late embryogenesis abundant protein D-29-like
Genome location	LG01:11984562..11985690
RNA-Seq Expression	Tan0017915
Synteny	Tan0017915
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146555.1 late embryogenesis abundant protein D-29 [Cucumis sativus]

9.4e-57

62.72

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Query:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR
        MGRK  T +VAV WL+LVA     EKC G+GEEA++DVK+N+S+I E ANLDEK EAVK  ASEV  + +D  ESWSNWAY+KIS+GLGLNEEE+KETA 
Subjt:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR

Query:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC
        N+ DKAG AA KTT+ INTAASDASNYASEKAGEA K    AAS LKSKSE VV  A+E       K KET+ +GKDKAAE YEA K          K+ 
Subjt:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC

Query:  VNCEAAKEKVSQATGEIGARIREKTAEL
         NCE A+E  S+  GEIG RIREK+AEL
Subjt:  VNCEAAKEKVSQATGEIGARIREKTAEL

XP_008452083.1 PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]

1.0e-55

62.72

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Query:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR
        MGRK  T +VAV WL+LVA     EKC G+G EA++DVKDN+S+I E+A LDEK EAVK  ASEV  D +D  ESWSNWAYDKISKGLGL+E+ELKETA 
Subjt:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR

Query:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC
        N+ DKAG AA KTT+ INTAAS ASNYASEKAGEA K    AASNLKSKS DVV  A+E       K KET+ +GKDKAAE YEA K + ++        
Subjt:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC

Query:  VNCEAAKEKVSQATGEIGARIREKTAEL
         NCE A+E  S+   EIG RIREKTAEL
Subjt:  VNCEAAKEKVSQATGEIGARIREKTAEL

XP_023533965.1 uncharacterized protein LOC111795650 [Cucurbita pepo subsp. pepo]

3.7e-53

61.36

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Query:  TTSLVAVSWLLLVAEMVMVEKCR-GWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETARNMVD
        T S VAV WLLL AEM +VEKCR G G  AM+DVKDNI++I E  NL+ K EAVKKGASEV +D +D  ES SNWA  +I+KGLGL EE LK+TA +M+D
Subjt:  TTSLVAVSWLLLVAEMVMVEKCR-GWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETARNMVD

Query:  KAGYAAKKTTQTINTAASDASNYASEKAGEAVKAASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVNCEAAKE
        KAG AA KTT TI+TAASD    AS+KAGEAVK              A S++A N K KAK+T  NGK+KAA+ YEA K EVE++VAA KECVNCEAAKE
Subjt:  KAGYAAKKTTQTINTAASDASNYASEKAGEAVKAASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVNCEAAKE

Query:  KVSQATGEIGARIREKTAEL
        + S A  +IGA+IREK++EL
Subjt:  KVSQATGEIGARIREKTAEL

XP_038906272.1 late embryogenesis abundant protein D-29 isoform X1 [Benincasa hispida]

8.5e-66

67.53

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Query:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR
        MGR    S+VAV WLLLVA     +KCRG GEEA+QDVKDN+S+IT++ +LDEK EAVK GAS+V  D ++  ESWSNWAY KISKGLG N EELKETA 
Subjt:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR

Query:  NMVDKAGYAAKKTTQTINTAA---SDASNYASEKAGEAVKAAS----NLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAA
         +VDKAG AA KTT+ ++TAA   SDASNYASEKAGEAVKAAS    NLKSKS DV+  A+E+A ++K KAKET+ +GKDKAAE YEA KNEV QK  AA
Subjt:  NMVDKAGYAAKKTTQTINTAA---SDASNYASEKAGEAVKAAS----NLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAA

Query:  KECVNCEAAKEKVSQATGEIGARIREKTAEL
        KE VNC AAKE  S++ GEIG RIREKTAEL
Subjt:  KECVNCEAAKEKVSQATGEIGARIREKTAEL

XP_038906279.1 late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida]

2.0e-67

68.42

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Query:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR
        MGR    S+VAV WLLLVA     +KCRG GEEA+QDVKDN+S+IT++ +LDEK EAVK GAS+V  D ++  ESWSNWAY KISKGLG N EELKETA 
Subjt:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR

Query:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVKAAS----NLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC
         +VDKAG AA KTT+ ++TAASDASNYASEKAGEAVKAAS    NLKSKS DV+  A+E+A ++K KAKET+ +GKDKAAE YEA KNEV QK  AAKE 
Subjt:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVKAAS----NLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC

Query:  VNCEAAKEKVSQATGEIGARIREKTAEL
        VNC AAKE  S++ GEIG RIREKTAEL
Subjt:  VNCEAAKEKVSQATGEIGARIREKTAEL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUJ5 Uncharacterized protein

4.5e-57

62.72

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Query:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR
        MGRK  T +VAV WL+LVA     EKC G+GEEA++DVK+N+S+I E ANLDEK EAVK  ASEV  + +D  ESWSNWAY+KIS+GLGLNEEE+KETA 
Subjt:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR

Query:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC
        N+ DKAG AA KTT+ INTAASDASNYASEKAGEA K    AAS LKSKSE VV  A+E       K KET+ +GKDKAAE YEA K          K+ 
Subjt:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC

Query:  VNCEAAKEKVSQATGEIGARIREKTAEL
         NCE A+E  S+  GEIG RIREK+AEL
Subjt:  VNCEAAKEKVSQATGEIGARIREKTAEL

A0A1S3BT31 late embryogenesis abundant protein D-29-like

5.0e-56

62.72

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Query:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR
        MGRK  T +VAV WL+LVA     EKC G+G EA++DVKDN+S+I E+A LDEK EAVK  ASEV  D +D  ESWSNWAYDKISKGLGL+E+ELKETA 
Subjt:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR

Query:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC
        N+ DKAG AA KTT+ INTAAS ASNYASEKAGEA K    AASNLKSKS DVV  A+E       K KET+ +GKDKAAE YEA K + ++        
Subjt:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC

Query:  VNCEAAKEKVSQATGEIGARIREKTAEL
         NCE A+E  S+   EIG RIREKTAEL
Subjt:  VNCEAAKEKVSQATGEIGARIREKTAEL

A0A5A7TSE6 Late embryogenesis abundant protein D-29-like

5.0e-56

62.72

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Query:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR
        MGRK  T +VAV WL+LVA     EKC G+G EA++DVKDN+S+I E+A LDEK EAVK  ASEV  D +D  ESWSNWAYDKISKGLGL+E+ELKETA 
Subjt:  MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETAR

Query:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC
        N+ DKAG AA KTT+ INTAAS ASNYASEKAGEA K    AASNLKSKS DVV  A+E       K KET+ +GKDKAAE YEA K + ++        
Subjt:  NMVDKAGYAAKKTTQTINTAASDASNYASEKAGEAVK----AASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKEC

Query:  VNCEAAKEKVSQATGEIGARIREKTAEL
         NCE A+E  S+   EIG RIREKTAEL
Subjt:  VNCEAAKEKVSQATGEIGARIREKTAEL

A0A6J1FVT6 late embryogenesis abundant protein D-29-like

2.3e-53

60.91

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Query:  TTSLVAVSWLLLVAEMVMVEKCRG-WGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETARNMVD
        T S VAV WLL  AEM +VEKCRG  G+ AM+DVKDNI++I E  N++ K EAVKKGASEV +D +D  ESWSNWA  +ISKGLGL EE LK+TA +M+D
Subjt:  TTSLVAVSWLLLVAEMVMVEKCRG-WGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETARNMVD

Query:  KAGYAAKKTTQTINTAASDASNYASEKAGEAVKAASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVNCEAAKE
        KAG AA KTT TI TAASD    AS+KAGEAVK              A S++A + K KAK+T  NGK+KAA+ YEA K EVE++VAA KECVNCEAAKE
Subjt:  KAGYAAKKTTQTINTAASDASNYASEKAGEAVKAASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVNCEAAKE

Query:  KVSQATGEIGARIREKTAEL
          S A  +IGA+IREK++EL
Subjt:  KVSQATGEIGARIREKTAEL

A0A6J1J6J8 late embryogenesis abundant protein D-29-like

2.7e-41

51.36

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Query:  TTSLVAVSWLLLVAEMVMVEKCRG-WGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETARNMVD
        T S VAV WLL   EM +VEKCRG  G+ A++DVKDNI++ITE ANLD K EA+KKGASEV +D +D  ESWSNWA  +ISKGLGL EE LK+TA +M+D
Subjt:  TTSLVAVSWLLLVAEMVMVEKCRG-WGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETARNMVD

Query:  KAGYAAKKTTQTINTAASDASNYASEKAGEAVKAASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVNCEAAKE
        KAG A                                                   K KAKET+ NGK+KAA+ YEA K EVE++VAA KECVNCEAAKE
Subjt:  KAGYAAKKTTQTINTAASDASNYASEKAGEAVKAASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVNCEAAKE

Query:  KVSQATGEIGARIREKTAEL
          S A  +IGA+IREK++EL
Subjt:  KVSQATGEIGARIREKTAEL

SwissProt top hits

e value

%identity

Alignment

P13940 Late embryogenesis abundant protein D-29

6.0e-06

27.94

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Query:  QDVKDNISKITENA--NLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGL-NEEELKETARNMVDKAGYAAKKTTQTINTAASDASNYASEKA
        Q  KD +    ++A   +    +  K  ASEV  + ++  ESW+ WA +KIS+GLG   +++ K +     D     A KT   +   AS A  Y+   A
Subjt:  QDVKDNISKITENA--NLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGL-NEEELKETARNMVDKAGYAAKKTTQTINTAASDASNYASEKA

Query:  GEAVKAASNLKSKSEDVVFAASEEACNMK----AKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVN---------CEAAKEKVSQATGEIGARIRE
        G+A         K++DV  AA  ++  M+     KA+E  ++ K+ A  AY A K +V        E  N          E AKE V++         ++
Subjt:  GEAVKAASNLKSKSEDVVFAASEEACNMK----AKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVN---------CEAAKEKVSQATGEIGARIRE

Query:  KTAE
        K  E
Subjt:  KTAE

Arabidopsis top hits

e value

%identity

Alignment

AT3G17520.1 Late embryogenesis abundant protein (LEA) family protein

9.5e-07

29.74

Show/hide

Query:  EEAMQDVKDNISKITENA-NLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKIS-KGLGLNEEELKETARNMVDKAGYAAKKTTQTINTAASDASNYAS
        EE +  VKD  S+  ++A  + + V    K   + L   ++  ESW+ WA +KI  K   +N   L ET      +A  AAK+         ++    A 
Subjt:  EEAMQDVKDNISKITENA-NLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKIS-KGLGLNEEELKETARNMVDKAGYAAKKTTQTINTAASDASNYAS

Query:  EKAGEAVKAASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVNCEAAKEKVSQATGEIGARIREKTAEL
        EKA +   AA   K K+E +   A  E+ + K K KE+ E  K KA E  E+ K++  Q   +A      E AK+ VS  +  +   + +  AEL
Subjt:  EKAGEAVKAASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVNCEAAKEKVSQATGEIGARIREKTAEL

AT4G36600.1 Late embryogenesis abundant (LEA) protein

3.4e-04

26.21

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Query:  EKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETARNMVDKAGYAAKKTTQTINTA---ASDASNYASEKAGEAVKAASNLKSKSEDV
        +K  +  + A +  D   D      + AYDK+    G   ++  +      DKAG A++K  Q  + A   A+ A + A  KA + +K A++   +++D 
Subjt:  EKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETARNMVDKAGYAAKKTTQTINTA---ASDASNYASEKAGEAVKAASNLKSKSEDV

Query:  VFA---------------ASEEACNMKAKAKETIENGKDKAAEAYEA----------VKNEVEQKVAAAKECVN------CEAAKEKVSQATGEIGARIR
         +                AS++A +++  A   ++  KDKA +AYE+            ++V ++  AAK+ ++       E+AKEK S A GE G+ +R
Subjt:  VFA---------------ASEEACNMKAKAKETIENGKDKAAEAYEA----------VKNEVEQKVAAAKECVN------CEAAKEKVSQATGEIGARIR

Query:  EKTAEL
        +++AEL
Subjt:  EKTAEL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGAGGAAGAGAACGACGTCGTTGGTGGCGGTTTCGTGGCTGCTGTTGGTGGCGGAGATGGTGATGGTGGAAAAATGCAGGGGATGGGGGGAAGAAGCGATGCAAGA
TGTGAAGGATAATATAAGTAAAATTACAGAGAATGCAAATCTTGATGAAAAAGTAGAAGCAGTTAAGAAAGGTGCTTCTGAAGTGCTTGATGACACTCAAGACACCGTTG
AGTCTTGGTCCAACTGGGCTTACGACAAGATTTCCAAAGGATTAGGATTGAACGAAGAAGAATTGAAAGAGACGGCCCGTAACATGGTGGACAAAGCCGGCTACGCAGCC
AAAAAAACCACACAAACAATCAACACAGCAGCTTCAGATGCATCTAATTACGCATCTGAGAAAGCCGGAGAGGCGGTGAAGGCGGCCAGCAACCTGAAGAGCAAGTCGGA
GGATGTCGTTTTCGCGGCGTCGGAGGAGGCGTGCAACATGAAAGCGAAGGCCAAAGAGACGATTGAGAACGGGAAGGACAAGGCGGCGGAGGCGTATGAGGCGGTGAAAA
ACGAGGTGGAGCAGAAAGTTGCGGCGGCGAAGGAGTGTGTGAACTGTGAAGCTGCTAAAGAGAAGGTGTCGCAGGCCACCGGTGAAATTGGGGCGAGGATAAGGGAGAAG
ACTGCCGAGCTGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGRKRTTSLVAVSWLLLVAEMVMVEKCRGWGEEAMQDVKDNISKITENANLDEKVEAVKKGASEVLDDTQDTVESWSNWAYDKISKGLGLNEEELKETARNMVDKAGYAA
KKTTQTINTAASDASNYASEKAGEAVKAASNLKSKSEDVVFAASEEACNMKAKAKETIENGKDKAAEAYEAVKNEVEQKVAAAKECVNCEAAKEKVSQATGEIGARIREK
TAEL

Tan0017915 (gene) of Snake gourd v1 genome