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Tan0017939 (gene) of Snake gourd v1 genome

Gene IDTan0017939
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationLG10:5223970..5225858
RNA-Seq ExpressionTan0017939
SyntenyTan0017939
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049218.1 uncharacterized protein E6C27_scaffold171G004580 [Cucumis melo var. makuwa]1.9e-3892.31Show/hide
Query:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        MDGDSKDVNGCKEKT+DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
KAG6597344.1 hypothetical protein SDJN03_10524, partial [Cucurbita argyrosperma subsp. sororia]3.5e-3790.53Show/hide
Query:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        M GDSKDV    E+ VDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]5.8e-4092.47Show/hide
Query:  GDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        GDSKDVNGCKEKT+DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
XP_008438475.1 PREDICTED: uncharacterized protein LOC103483558 isoform X2 [Cucumis melo]1.9e-3892.31Show/hide
Query:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        MDGDSKDVNGCKEKT+DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]1.5e-4091.58Show/hide
Query:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        MDGDSKDVNGCKEK +DS A GEVGD  NGE+YSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein2.8e-4092.47Show/hide
Query:  GDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        GDSKDVNGCKEKT+DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
A0A1S3AX40 uncharacterized protein LOC103483558 isoform X29.0e-3992.31Show/hide
Query:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        MDGDSKDVNGCKEKT+DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
A0A5A7U1V8 Uncharacterized protein9.0e-3992.31Show/hide
Query:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
        MDGDSKDVNGCKEKT+DS AAGEVGD  NGE+YSESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCS
A0A6J1EBY1 uncharacterized protein LOC1114317931.9e-3686.32Show/hide
Query:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        M GDS+ VNG  E++VDS AAGEVGD  NGED SESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
A0A6J1INK9 uncharacterized protein LOC1114791209.3e-3685.26Show/hide
Query:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        M GDS+ VNG  E++VDS AAGEVGD  N ED SESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein8.4e-0548.89Show/hide
Query:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EGDSCSCIIM
        R KV+W D+ G  +AE+ EF+PS+V +S DE     G SC C IM
Subjt:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EGDSCSCIIM
AT1G55475.1 unknown protein6.4e-0546.51Show/hide
Query:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        + + KV+W D  G  LAEI EF+PSD  D   + G +C CII+
Subjt:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
AT2G33390.1 unknown protein1.1e-2049.46Show/hide
Query:  GDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM
        G+ K+ NGC+ K + S+ + E+ D    E+ SES  LLPPR+GGMSR ++K +  V+WND  G+NLAE+L ++PS+VSD+ D++ DSC C IM
Subjt:  GDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGCGATTCTAAGGATGTTAATGGCTGCAAAGAGAAGACTGTGGATTCTGTGGCTGCTGGAGAAGTTGGGGATTCCGGTAACGGCGAAGATTACAGTGAATCCAA
TGCCTTATTGCCGCCGCGACGTGGCGGAATGTCGAGGAAATCGAATAAGCCAAGGATGAAGGTCCGGTGGAATGATAGTAATGGTAATAACTTAGCGGAGATTTTGGAGT
TTCAACCAAGCGATGTGAGCGATTCAGGGGACGAGGAGGGTGACTCTTGCAGCTGTATAATTATGTAG
mRNA sequenceShow/hide mRNA sequence
TGACCAATCACAGCAAAGTAAACGCCTTCTTCTCTCTTTCTTTTAGTTTGCTTTTTCGCTCATCTCTGATCTGTACTACTTCACCACTCCATTGCAAGCAATTCACAATT
TTGAGTTCAATTTTCGTTCCGTTACGTTATTTGAGACCCTTTTTTTAAAAAATTTTTCTTTTTGGGTTTTGGAGGGGATTTAATTTTCTGTCACTTTCTCGGGAATCTAT
CTGTTCCACTAATCTTTTTTTGCCCCTTTCTTTTCTAGCTTCGTTTGGTTAAAATTTTAGATCGGGGGTTTTACTTTTCGAAGAGGGTTTTTTGATGGGGTTGTTGGGTT
CATAAATTTTGAACCCGTGAGCGTTGACCCAGTTTTGGAATTTGAGTTTCGAGTGGTTGGGTTGTGAAATTTTGTTTTCTTGGGGTTCAATGGAGTGGATTTTTGAGACG
ATTCGATTCAGAAATCCGAAATCTGGGTCCGATTTTTGGTGTAGCTGATAGGGAAAATTTCCGATTCGATTTATAGTTCGTGAGAGTTTTGAACTATGGATGGCGATTCT
AAGGATGTTAATGGCTGCAAAGAGAAGACTGTGGATTCTGTGGCTGCTGGAGAAGTTGGGGATTCCGGTAACGGCGAAGATTACAGTGAATCCAATGCCTTATTGCCGCC
GCGACGTGGCGGAATGTCGAGGAAATCGAATAAGCCAAGGATGAAGGTCCGGTGGAATGATAGTAATGGTAATAACTTAGCGGAGATTTTGGAGTTTCAACCAAGCGATG
TGAGCGATTCAGGGGACGAGGAGGGTGACTCTTGCAGCTGTATAATTATGTAGATTATTACATCAAATATTAGTGTATAATGACAAGTACAATGTGGTTGATTTACTGCT
AAACTGATAGTCATTGGTGGTGTTTCTGACTGTATACCAATTGCTTTGCTACTACGACGAGTTCAAAGATCGACTGATTAATATGTTGTTATCGCTTGCGGTGTTTGGCG
ATGTGTCCCAGTGACATCTTGTACTGTTTCGGTTTTCGAATTTGTAAGATCACTTTCCAGGTGATATACACTGTATGGATGATGCTGATAATGATGTTATTATAACAAAC
ATTCAGATTAGTTGAGCATTTGACAGTGCAGAAGAATACTCTGTGTAATGCAAAAACTTGGAATTTTTCCTATACTTATCATGGTTAATCAATCATAGAGCTTCTCTA
Protein sequenceShow/hide protein sequence
MDGDSKDVNGCKEKTVDSVAAGEVGDSGNGEDYSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEGDSCSCIIM