; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017958 (gene) of Snake gourd v1 genome

Gene IDTan0017958
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionActin-related protein 2/3 complex subunit 5
Genome locationLG11:1537511..1541078
RNA-Seq ExpressionTan0017958
SyntenyTan0017958
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR006789 - Actin-related protein 2/3 complex subunit 5
IPR036743 - Actin-related protein 2/3 complex subunit 5 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441367.1 PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo]7.8e-67100Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTINTV
        DQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTINTV

XP_010089302.1 actin-related protein 2/3 complex subunit 5A [Morus notabilis]1.0e-6698.47Show/hide
Query:  DEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPT
        D FVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPT
Subjt:  DEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPT

Query:  CDQCLRIHEKLTERAGLGCILRSLADTINTV
        CDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  CDQCLRIHEKLTERAGLGCILRSLADTINTV

XP_022133485.1 actin-related protein 2/3 complex subunit 5A [Momordica charantia]2.9e-6697.73Show/hide
Query:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
        A EFVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSANWI VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
Subjt:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP

Query:  TCDQCLRIHEKLTERAGLGCILRSLADTINTV
        TCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  TCDQCLRIHEKLTERAGLGCILRSLADTINTV

XP_022989961.1 actin-related protein 2/3 complex subunit 5A isoform X2 [Cucurbita maxima]6.6e-6696.24Show/hide
Query:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
        M+D FVEADNAEAIITRIEHKSRKIESLLKQSK VEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
Subjt:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR

Query:  PTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        PTCDQCLRIHEKLTE+AGLGCILR+LADTINTV
Subjt:  PTCDQCLRIHEKLTERAGLGCILRSLADTINTV

XP_038884940.1 actin-related protein 2/3 complex subunit 5A [Benincasa hispida]1.7e-6699.23Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        EFVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTINTV
        DQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTINTV

TrEMBL top hitse value%identityAlignment
A0A1S3B407 Actin-related protein 2/3 complex subunit 53.8e-67100Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTINTV
        DQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTINTV

A0A6J1BVD6 Actin-related protein 2/3 complex subunit 51.4e-6697.73Show/hide
Query:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
        A EFVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSANWI VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
Subjt:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP

Query:  TCDQCLRIHEKLTERAGLGCILRSLADTINTV
        TCDQCLRIHEKLTERAGLGCILRSLADTINTV
Subjt:  TCDQCLRIHEKLTERAGLGCILRSLADTINTV

A0A6J1JLM3 Actin-related protein 2/3 complex subunit 53.2e-6696.24Show/hide
Query:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
        M+D FVEADNAEAIITRIEHKSRKIESLLKQSK VEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR
Subjt:  MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDR

Query:  PTCDQCLRIHEKLTERAGLGCILRSLADTINTV
        PTCDQCLRIHEKLTE+AGLGCILR+LADTINTV
Subjt:  PTCDQCLRIHEKLTERAGLGCILRSLADTINTV

A0A6P4A354 Actin-related protein 2/3 complex subunit 54.2e-6697.69Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        EFVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRA+MAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTINTV
        DQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTINTV

W9R3V7 Actin-related protein 2/3 complex subunit 54.9e-6798.47Show/hide
Query:  DEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPT
        D FVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPT
Subjt:  DEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPT

Query:  CDQCLRIHEKLTERAGLGCILRSLADTINTV
        CDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  CDQCLRIHEKLTERAGLGCILRSLADTINTV

SwissProt top hitse value%identityAlignment
B3H6Y2 Actin-related protein 2/3 complex subunit 5B4.1e-5580.3Show/hide
Query:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
        A  FVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTGD P
Subjt:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP

Query:  TCDQCLRIHEKLTERAGLGCILRSLADTINTV
        TC+QCL IHEKLTERAGLGCILR L+DT NTV
Subjt:  TCDQCLRIHEKLTERAGLGCILRSLADTINTV

O15511 Actin-related protein 2/3 complex subunit 52.6e-0932.38Show/hide
Query:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC
        +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD    D+LMKY+Y+G  +    +    L+ HEK     G+G 
Subjt:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC

Query:  ILRSL
        I+R L
Subjt:  ILRSL

Q5R516 Actin-related protein 2/3 complex subunit 52.6e-0932.38Show/hide
Query:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC
        +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD    D+LMKY+Y+G  +    +    L+ HEK     G+G 
Subjt:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC

Query:  ILRSL
        I+R L
Subjt:  ILRSL

Q6DE18 Actin-related protein 2/3 complex subunit 5-B2.0e-0931.43Show/hide
Query:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC
        +++SL++Q + + A ++AL  SP N++++  K     +V + L + K  +++   ++LDP   D+LMKY+Y+G       +    L+ HEK     GLG 
Subjt:  KIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC

Query:  ILRSL
        I+R L
Subjt:  ILRSL

Q9M117 Actin-related protein 2/3 complex subunit 5A1.3e-6190Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        EFVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTC
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTINTV
        DQCL+IHEKLTERAGLGCILR L DTINTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTINTV

Arabidopsis top hitse value%identityAlignment
AT4G01710.1 ARP2/3 complex 16 kDa subunit (p16-Arc)9.5e-6390Show/hide
Query:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        EFVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTC
Subjt:  EFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTINTV
        DQCL+IHEKLTERAGLGCILR L DTINTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTINTV

AT5G65274.1 ARP2/3 complex 16 kDa subunit (p16-Arc)2.9e-5680.3Show/hide
Query:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP
        A  FVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTGD P
Subjt:  ADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRP

Query:  TCDQCLRIHEKLTERAGLGCILRSLADTINTV
        TC+QCL IHEKLTERAGLGCILR L+DT NTV
Subjt:  TCDQCLRIHEKLTERAGLGCILRSLADTINTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATGAATTTGTGGAAGCAGACAATGCAGAAGCCATAATCACTAGAATTGAGCACAAATCTCGAAAGATCGAGAGCTTACTTAAACAGTCTAAGCCAGTCGAAGC
TCTAAAAACTGCTCTCGAAGGTTCGCCTCCGAATACTCGAGATGAGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTTATGGCTATAAAGGATGTAGATG
GGATGTTTTCTTCGTTGGATCCGGAGTACTATGATATTCTAATGAAGTACTTGTACAGAGGCTTGTCAACTGGTGATCGTCCCACATGTGATCAGTGTCTCAGGATACAT
GAAAAATTGACAGAAAGGGCTGGCTTAGGCTGCATTCTCCGTTCCCTTGCAGATACTATCAACACAGTTTGA
mRNA sequenceShow/hide mRNA sequence
GTAAATTCGAAATTAGGCCAATTTTAGTATAAAATACTGCCAAACACAATCTATTTTGGATGGAAAACTTTTGGATCAAAACAAGATGGCAAAATCATTTTGCCTTCCAA
ATCGAGGGTTTTCAAACAAAGGCTGAGCTCGAGGAAATCCTACTGAAGGTTGGGTGACAGGCGAAAATGGCAGATGAATTTGTGGAAGCAGACAATGCAGAAGCCATAAT
CACTAGAATTGAGCACAAATCTCGAAAGATCGAGAGCTTACTTAAACAGTCTAAGCCAGTCGAAGCTCTAAAAACTGCTCTCGAAGGTTCGCCTCCGAATACTCGAGATG
AGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTTATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGTTGGATCCGGAGTACTATGATATTCTAATG
AAGTACTTGTACAGAGGCTTGTCAACTGGTGATCGTCCCACATGTGATCAGTGTCTCAGGATACATGAAAAATTGACAGAAAGGGCTGGCTTAGGCTGCATTCTCCGTTC
CCTTGCAGATACTATCAACACAGTTTGATTTAGCTTAACTTGATGGATAGAACATTATGAGCCTTCCCCTCTTTGGTTGATGTCGGAAATCATGTTATTTTCTCTCGGAT
GTATGTGAAATTTCTTTTCAGAGCGTGTTTTGTGTTAAGCTAAATAACCTTCTATATATGATACATGTGAATATCATTTAACTGAGGATATTTTGAATTATTACTTAAGT
TAGTTTTTGTTATTTGTTTGGCTGGACTGGAAAGGACAAAGAAATATACTGTTTTGT
Protein sequenceShow/hide protein sequence
MADEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIH
EKLTERAGLGCILRSLADTINTV