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Tan0017968 (gene) of Snake gourd v1 genome

Gene IDTan0017968
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:63136643..63145811
RNA-Seq ExpressionTan0017968
SyntenyTan0017968
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465748.1 PREDICTED: uncharacterized protein LOC103503357 [Cucumis melo]2.0e-2352.98Show/hide
Query:  MDSSEPLNQNPDPIQPHNFLVIRDDYFL-HQSPVFPPTHHEDLPV-------PEPPPPPVLEASDESEPSSPAASVLPSRA-VGEAIMRCCEILKAKVIS
        MD SE   + P+P    NFLVIRDDYF+ H+SPVFPP  HEDLPV       P        E+SD S+ S+P +S +  RA V EAIMR CE++KAKV+S
Subjt:  MDSSEPLNQNPDPIQPHNFLVIRDDYFL-HQSPVFPPTHHEDLPV-------PEPPPPPVLEASDESEPSSPAASVLPSRA-VGEAIMRCCEILKAKVIS

Query:  ---RFRC------SVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE
            F C      S+   TAMA LL++ LF LKMKMK  + LPWR R +AVRRD EE L+LL+KHKDE
Subjt:  ---RFRC------SVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE

XP_022999312.1 uncharacterized protein LOC111493726 isoform X1 [Cucurbita maxima]3.6e-2552.66Show/hide
Query:  QPHNFLVIRDDYFLH-QSPVFPPTHHEDLPV--------------------PEPPPPPVLEASDE---SEPSSPAASVLPSRAVGEAIMRCCEILKAKVI
        Q  NFLVIR+DYF+H +SPVFPPTHH+  P+                     EP   P  E SDE    EPSSPAAS L SRAVGEAIMR  EI+KAKVI
Subjt:  QPHNFLVIRDDYFLH-QSPVFPPTHHEDLPV--------------------PEPPPPPVLEASDE---SEPSSPAASVLPSRAVGEAIMRCCEILKAKVI

Query:  S---------RFRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE
        S         R  CS LPVTAMA  L L L     K+K+++RLPWR  T  V  DNE RLLLL+KHKD+
Subjt:  S---------RFRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE

XP_022999313.1 uncharacterized protein LOC111493726 isoform X2 [Cucurbita maxima]2.8e-2556.96Show/hide
Query:  QPHNFLVIRDDYFLH-QSPVFPPTH------HEDLPVPEPPPP---PVLEASDE---SEPSSPAASVLPSRAVGEAIMRCCEILKAKVIS---------R
        Q  NFLVIR+DYF+H +SPVFPPTH      HE  P  +P  P   P  E SDE    EPSSPAAS L SRAVGEAIMR  EI+KAKVIS         R
Subjt:  QPHNFLVIRDDYFLH-QSPVFPPTH------HEDLPVPEPPPP---PVLEASDE---SEPSSPAASVLPSRAVGEAIMRCCEILKAKVIS---------R

Query:  FRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE
          CS LPVTAMA  L L L     K+K+++RLPWR  T  V  DNE RLLLL+KHKD+
Subjt:  FRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE

XP_023520476.1 uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo]8.1e-2554.94Show/hide
Query:  MDSSEPLNQNPDPIQPHNFLVIRDDYFLH-QSPVFPPTHHEDLPVPEPPPPPVLEASDESEPSSPAASVLPSRAVGEAIMRCCEILKAKVIS--------
        MD S+ L       QP N LVIR+DYF+H +SPVFPP H      P    P   E SD+ EPSSPA S L SRAVGEAIMR  EI+KAKVIS        
Subjt:  MDSSEPLNQNPDPIQPHNFLVIRDDYFLH-QSPVFPPTHHEDLPVPEPPPPPVLEASDESEPSSPAASVLPSRAVGEAIMRCCEILKAKVIS--------

Query:  -RFRCSVLPVTAMAA--LLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE
         R  CS LPVTAMAA   L+L LF  K+K+K+++RLPWR  T  V  DN+ RLLLL+KHKD+
Subjt:  -RFRCSVLPVTAMAA--LLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE

XP_038889624.1 uncharacterized protein LOC120079493 [Benincasa hispida]5.6e-3455.56Show/hide
Query:  DSSEPLNQNPDPIQPHNFLVIRDDYFLH-QSPVFPPTHHEDLPVPEPPPPPVLEASDESE-------PSSPAASVLPSRA-VGEAIMRCCEILKAKVISR
        DS E LNQNPDPI+P NFLVIR++YF+H +SPVFPP HHEDLPV       V  ASD+SE        S+P  S L  RA VGEAI+R CE+ KAKV+S 
Subjt:  DSSEPLNQNPDPIQPHNFLVIRDDYFLH-QSPVFPPTHHEDLPVPEPPPPPVLEASDESE-------PSSPAASVLPSRA-VGEAIMRCCEILKAKVISR

Query:  F---------RCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDEGHRHSLSAQTISIQGHRHSLSA
                   CSV PVTAMAA+LV+ +F LKMKMK  LRLPWR R+VAV RDNE+RL+LL++HKDE     +S   + I     +LSA
Subjt:  F---------RCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDEGHRHSLSAQTISIQGHRHSLSA

TrEMBL top hitse value%identityAlignment
A0A1S3CPJ3 uncharacterized protein LOC1035033579.7e-2452.98Show/hide
Query:  MDSSEPLNQNPDPIQPHNFLVIRDDYFL-HQSPVFPPTHHEDLPV-------PEPPPPPVLEASDESEPSSPAASVLPSRA-VGEAIMRCCEILKAKVIS
        MD SE   + P+P    NFLVIRDDYF+ H+SPVFPP  HEDLPV       P        E+SD S+ S+P +S +  RA V EAIMR CE++KAKV+S
Subjt:  MDSSEPLNQNPDPIQPHNFLVIRDDYFL-HQSPVFPPTHHEDLPV-------PEPPPPPVLEASDESEPSSPAASVLPSRA-VGEAIMRCCEILKAKVIS

Query:  ---RFRC------SVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE
            F C      S+   TAMA LL++ LF LKMKMK  + LPWR R +AVRRD EE L+LL+KHKDE
Subjt:  ---RFRC------SVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE

A0A5A7T5Z8 Uncharacterized protein9.7e-2452.98Show/hide
Query:  MDSSEPLNQNPDPIQPHNFLVIRDDYFL-HQSPVFPPTHHEDLPV-------PEPPPPPVLEASDESEPSSPAASVLPSRA-VGEAIMRCCEILKAKVIS
        MD SE   + P+P    NFLVIRDDYF+ H+SPVFPP  HEDLPV       P        E+SD S+ S+P +S +  RA V EAIMR CE++KAKV+S
Subjt:  MDSSEPLNQNPDPIQPHNFLVIRDDYFL-HQSPVFPPTHHEDLPV-------PEPPPPPVLEASDESEPSSPAASVLPSRA-VGEAIMRCCEILKAKVIS

Query:  ---RFRC------SVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE
            F C      S+   TAMA LL++ LF LKMKMK  + LPWR R +AVRRD EE L+LL+KHKDE
Subjt:  ---RFRC------SVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE

A0A6J1G4A7 uncharacterized protein LOC111450604 isoform X22.2e-2353.75Show/hide
Query:  MDSSEPLNQNPDPIQPHNFLVIRDDYFLH-QSPVFPPTHHEDLPVPEPPPPPVLEASDESEPSSPAASVLPSRAVGEAIMRCCEILKAKVIS--------
        MD SE       P Q  N LVIR+DYF+H +SPVFPP H      P    P   E SD+ E SSPA S L SRAVGEAIMR  EI+KAKVIS        
Subjt:  MDSSEPLNQNPDPIQPHNFLVIRDDYFLH-QSPVFPPTHHEDLPVPEPPPPPVLEASDESEPSSPAASVLPSRAVGEAIMRCCEILKAKVIS--------

Query:  -RFRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE
         R  CS LPVTAMAA L L L     K+K+++RLPWR  T  V  DN+ RLLLL+KHKD+
Subjt:  -RFRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE

A0A6J1KAJ3 uncharacterized protein LOC111493726 isoform X11.8e-2552.66Show/hide
Query:  QPHNFLVIRDDYFLH-QSPVFPPTHHEDLPV--------------------PEPPPPPVLEASDE---SEPSSPAASVLPSRAVGEAIMRCCEILKAKVI
        Q  NFLVIR+DYF+H +SPVFPPTHH+  P+                     EP   P  E SDE    EPSSPAAS L SRAVGEAIMR  EI+KAKVI
Subjt:  QPHNFLVIRDDYFLH-QSPVFPPTHHEDLPV--------------------PEPPPPPVLEASDE---SEPSSPAASVLPSRAVGEAIMRCCEILKAKVI

Query:  S---------RFRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE
        S         R  CS LPVTAMA  L L L     K+K+++RLPWR  T  V  DNE RLLLL+KHKD+
Subjt:  S---------RFRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE

A0A6J1KJA9 uncharacterized protein LOC111493726 isoform X21.4e-2556.96Show/hide
Query:  QPHNFLVIRDDYFLH-QSPVFPPTH------HEDLPVPEPPPP---PVLEASDE---SEPSSPAASVLPSRAVGEAIMRCCEILKAKVIS---------R
        Q  NFLVIR+DYF+H +SPVFPPTH      HE  P  +P  P   P  E SDE    EPSSPAAS L SRAVGEAIMR  EI+KAKVIS         R
Subjt:  QPHNFLVIRDDYFLH-QSPVFPPTH------HEDLPVPEPPPP---PVLEASDE---SEPSSPAASVLPSRAVGEAIMRCCEILKAKVIS---------R

Query:  FRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE
          CS LPVTAMA  L L L     K+K+++RLPWR  T  V  DNE RLLLL+KHKD+
Subjt:  FRCSVLPVTAMAALLVLSLFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTTCAGAACCCCTAAATCAAAATCCAGATCCAATTCAGCCCCATAATTTCCTAGTCATTAGAGATGACTATTTTCTTCACCAATCCCCTGTTTTTCCCCCAAC
TCACCATGAAGATTTGCCAGTACCTGAACCTCCGCCTCCTCCCGTTCTTGAAGCTTCCGATGAATCTGAACCATCGTCTCCGGCGGCTTCAGTTTTGCCCTCGAGAGCCG
TCGGTGAAGCTATTATGAGGTGTTGTGAGATTCTTAAGGCGAAGGTAATTTCTCGATTTCGATGCTCTGTCCTTCCGGTTACTGCAATGGCGGCTCTGTTGGTGCTGTCA
CTGTTTTGGTTGAAGATGAAGATGAAGCTGCGGCTGCGGCTGCCATGGCGTCGACGGACTGTCGCTGTGCGTAGGGATAACGAAGAGCGTTTGCTTCTCCTCATTAAACA
CAAGGATGAGGGTCACCGACATTCTCTGTCTGCCCAAACTATTTCCATCCAAGGCCACCGACACTCTCTGTCGGCTCCAACAAATTATTCATCAAAGGTCATCAACGTTC
TCAGAAATCTCAAATACTTGTTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
GCAAGGATGAGCTGATACATTTGGACACCACTAAGTATTGGTAAGAAATGGACATATGGGGACACTATGACTATGGAAGGGTTGACATTTACATCTGTTTGTTTATAATA
ATAAGTCAATTTTCAGATATAGTTGTTGAAGTAGTTAAGATTAGAGATGTCTTAGTTGCCACTCCCATATACTATAAAACTAAAAAGATCTATATCTTAAAAAAAAATTA
TTTATGGTTTTGAAGTGAAAGGAAGAAAAAGAGAAAAAAGGGAAAAAAGATTTTGGTGTGTGTCGTGATATTGAAATCTGAAAATATCTCGTCAAAAGCAACCAAACCAA
TATCATGTTATCTTCTACATGATCGATCATCTTCTGCCATTCTCTGACCCAAATATCTGTGTTCCCATCCACTGACCTGAACAAACCAAAATTCCCAAGAAGAAATGGAT
AGTTCAGAACCCCTAAATCAAAATCCAGATCCAATTCAGCCCCATAATTTCCTAGTCATTAGAGATGACTATTTTCTTCACCAATCCCCTGTTTTTCCCCCAACTCACCA
TGAAGATTTGCCAGTACCTGAACCTCCGCCTCCTCCCGTTCTTGAAGCTTCCGATGAATCTGAACCATCGTCTCCGGCGGCTTCAGTTTTGCCCTCGAGAGCCGTCGGTG
AAGCTATTATGAGGTGTTGTGAGATTCTTAAGGCGAAGGTAATTTCTCGATTTCGATGCTCTGTCCTTCCGGTTACTGCAATGGCGGCTCTGTTGGTGCTGTCACTGTTT
TGGTTGAAGATGAAGATGAAGCTGCGGCTGCGGCTGCCATGGCGTCGACGGACTGTCGCTGTGCGTAGGGATAACGAAGAGCGTTTGCTTCTCCTCATTAAACACAAGGA
TGAGGGTCACCGACATTCTCTGTCTGCCCAAACTATTTCCATCCAAGGCCACCGACACTCTCTGTCGGCTCCAACAAATTATTCATCAAAGGTCATCAACGTTCTCAGAA
ATCTCAAATACTTGTTCTTTTAGACTCAGTGCATTGACCCTAACTATCTTAAGACATGGTTACCAATGTTACTTTTAAATCCACTAGTGACATACCACCCTATACTAGAT
GAGATTTTAAGTTTGTTGAAGACTCTATCAA
Protein sequenceShow/hide protein sequence
MDSSEPLNQNPDPIQPHNFLVIRDDYFLHQSPVFPPTHHEDLPVPEPPPPPVLEASDESEPSSPAASVLPSRAVGEAIMRCCEILKAKVISRFRCSVLPVTAMAALLVLS
LFWLKMKMKLRLRLPWRRRTVAVRRDNEERLLLLIKHKDEGHRHSLSAQTISIQGHRHSLSAPTNYSSKVINVLRNLKYLFF