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Tan0017972 (gene) of Snake gourd v1 genome

Gene IDTan0017972
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSERF family protein
Genome locationLG03:72507161..72508672
RNA-Seq ExpressionTan0017972
SyntenyTan0017972
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR026939 - ZNF706/At2g23090 superfamily
IPR039438 - At2g23090-like, zinc-binding domain
IPR039713 - At2g23090-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3671733.1 putative acyl-CoA-binding domain-containing protein 3-like [Capsicum annuum]3.2e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQKAKMAREKN+EK+KA KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVY CFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
XP_016568853.1 PREDICTED: uncharacterized protein At2g23090 [Capsicum annuum]3.2e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQKAKMAREKN+EK+KA KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVY CFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
XP_022133290.1 uncharacterized protein At2g23090 [Momordica charantia]2.5e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQKAKMAREKN+EKLKA KGSQLE+NKKAM+IQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
XP_022963417.1 uncharacterized protein At2g23090 [Cucurbita moschata]2.5e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQKAKMAREKN+EKLKA KGSQLE+NKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPK+DVYTCFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
XP_038882025.1 uncharacterized protein At2g23090 [Benincasa hispida]2.5e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQK+KMAREKN+EKLKA KGSQLEANKKAMSIQCKVCMQTFICTT+EVKCREHAEAKHPKSDVYTCFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
TrEMBL top hitse value%identityAlignment
A0A1U8GJE5 uncharacterized protein At2g230901.6e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQKAKMAREKN+EK+KA KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVY CFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
A0A2G3CPQ2 Uncharacterized protein1.6e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQKAKMAREKN+EK+KA KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVY CFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
A0A6J1BUU7 uncharacterized protein At2g230901.2e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQKAKMAREKN+EKLKA KGSQLE+NKKAM+IQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
A0A6J1HF74 uncharacterized protein At2g230901.2e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQKAKMAREKN+EKLKA KGSQLE+NKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPK+DVYTCFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
A0A6J1KLS2 uncharacterized protein At2g230901.2e-3394.81Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGNGQKAKMAREKN+EKLKA KGSQLE+NKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPK+DVYTCFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
SwissProt top hitse value%identityAlignment
O64818 Uncharacterized protein At2g230909.2e-3185.9Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAP-KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGN QK+ MAR KN+EK KA  KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPK+DV  CFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAP-KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
Arabidopsis top hitse value%identityAlignment
AT2G23090.1 Uncharacterised protein family SERF6.5e-3285.9Show/hide
Query:  MGGGNGQKAKMAREKNIEKLKAP-KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MGGGN QK+ MAR KN+EK KA  KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPK+DV  CFPHLKK
Subjt:  MGGGNGQKAKMAREKNIEKLKAP-KGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGGGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAACATAGAGAAGCTGAAAGCTCCTAAGGGAAGTCAGCTCGAAGCAAACAAGAAAGCAATGTCTAT
TCAGTGCAAGGTATGCATGCAAACCTTTATCTGCACCACGTCAGAGGTCAAATGCAGGGAACATGCTGAAGCAAAGCACCCAAAATCTGATGTCTATACTTGTTTCCCAC
ATCTTAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGGGGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAACATAGAGAAGCTGAAAGCTCCTAAGGGAAGTCAGCTCGAAGCAAACAAGAAAGCAATGTCTAT
TCAGTGCAAGGTATGCATGCAAACCTTTATCTGCACCACGTCAGAGGTCAAATGCAGGGAACATGCTGAAGCAAAGCACCCAAAATCTGATGTCTATACTTGTTTCCCAC
ATCTTAAAAAATGA
Protein sequenceShow/hide protein sequence
MGGGNGQKAKMAREKNIEKLKAPKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK