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Tan0017975 (gene) of Snake gourd v1 genome

Gene IDTan0017975
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationLG03:44362301..44362537
RNA-Seq ExpressionTan0017975
SyntenyTan0017975
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465297.1 PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo]4.5e-0658.24Show/hide
Query:  MTGGGKGGGGGGGG----GIRDGGGGGGSAKSGGGSG---------KGSGGGNGMMVAPGKGGDVYIARDAFEQNTKGYFDDHRASQKSGK
        M GGGK GGGGGGG    G+  GGGGGGS   GGG G          G GGG+G MVAPG GG V+I+RDAFE N++GYF D RA++K GK
Subjt:  MTGGGKGGGGGGGG----GIRDGGGGGGSAKSGGGSG---------KGSGGGNGMMVAPGKGGDVYIARDAFEQNTKGYFDDHRASQKSGK
TrEMBL top hitse value%identityAlignment
A0A1S3CQ14 glycine-rich cell wall structural protein 1.0-like2.2e-0658.24Show/hide
Query:  MTGGGKGGGGGGGG----GIRDGGGGGGSAKSGGGSG---------KGSGGGNGMMVAPGKGGDVYIARDAFEQNTKGYFDDHRASQKSGK
        M GGGK GGGGGGG    G+  GGGGGGS   GGG G          G GGG+G MVAPG GG V+I+RDAFE N++GYF D RA++K GK
Subjt:  MTGGGKGGGGGGGG----GIRDGGGGGGSAKSGGGSG---------KGSGGGNGMMVAPGKGGDVYIARDAFEQNTKGYFDDHRASQKSGK
A0A6J1DFA1 LOW QUALITY PROTEIN: keratin, type II cytoskeletal 1-like5.9e-0461.54Show/hide
Query:  MTGGGKGGGGGGGGGIRDGGGGGGSAKSGGGSGKGSGGGNGMMVAPGKGGDVYIARDAFEQNTKGYFDDHRASQKSGK
        M GGGKGGGGGGGG    GGGGGG    GGGS  G GG +GMMVAPG GG  YI+R  FE N  GYF +   ++KSGK
Subjt:  MTGGGKGGGGGGGGGIRDGGGGGGSAKSGGGSGKGSGGGNGMMVAPGKGGDVYIARDAFEQNTKGYFDDHRASQKSGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGGCGGTGGAAAAGGTGGAGGAGGAGGCGGCGGCGGCGGTATCAGAGATGGAGGGGGTGGTGGCGGCAGTGCCAAGAGTGGAGGTGGGAGCGGCAAAGGAAGTGG
CGGTGGAAATGGAATGATGGTTGCTCCTGGAAAAGGAGGAGATGTTTATATCGCACGAGATGCATTCGAACAAAATACTAAAGGTTATTTTGATGATCATCGTGCATCTC
AAAAGAGTGGCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCGGCGGTGGAAAAGGTGGAGGAGGAGGCGGCGGCGGCGGTATCAGAGATGGAGGGGGTGGTGGCGGCAGTGCCAAGAGTGGAGGTGGGAGCGGCAAAGGAAGTGG
CGGTGGAAATGGAATGATGGTTGCTCCTGGAAAAGGAGGAGATGTTTATATCGCACGAGATGCATTCGAACAAAATACTAAAGGTTATTTTGATGATCATCGTGCATCTC
AAAAGAGTGGCAAGTAG
Protein sequenceShow/hide protein sequence
MTGGGKGGGGGGGGGIRDGGGGGGSAKSGGGSGKGSGGGNGMMVAPGKGGDVYIARDAFEQNTKGYFDDHRASQKSGK