; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018008 (gene) of Snake gourd v1 genome

Gene IDTan0018008
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Genome locationLG01:22783238..22796770
RNA-Seq ExpressionTan0018008
SyntenyTan0018008
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR038863 - Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147198.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus]1.4e-6596.06Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+L+NLGS+ILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
XP_022923346.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita moschata]2.0e-6496.06Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
XP_022950674.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata]3.4e-6494.49Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGS++LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
XP_022965223.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima]4.1e-6596.85Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
XP_038903151.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida]2.2e-6698.43Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNL SRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
TrEMBL top hitse value%identityAlignment
A0A0A0L5J8 Uncharacterized protein6.8e-6696.06Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+L+NLGS+ILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
A0A1S3BK37 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial6.8e-6696.06Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+L+NLGS+ILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
A0A6J1E6K0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial9.8e-6596.06Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
A0A6J1HN93 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial2.0e-6596.85Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
A0A6J1KTK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like1.7e-6494.49Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGS++LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA
SwissProt top hitse value%identityAlignment
Q9FGK0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial3.2e-5783.2Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLS + SRI+GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL  NDEL+WDNGT FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEP
        KASK+PF P+VYPYDNLRVELGGEP
Subjt:  KASKIPFAPKVYPYDNLRVELGGEP
Arabidopsis top hitse value%identityAlignment
AT5G47570.1 unknown protein2.3e-5883.2Show/hide
Query:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLS + SRI+GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL  NDEL+WDNGT FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEP
        KASK+PF P+VYPYDNLRVELGGEP
Subjt:  KASKIPFAPKVYPYDNLRVELGGEP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGCAGATTGAGCAATTTGGGTTCAAGGATCCTCGGCGGCAATGGCGTCGTTGGTCGCTCAATCGCTTCATCTCTTCGCCTTCGCTCCGGCATGGGCCTTCCCGT
CGGCAAACATATCGTCCCCGATAAACCCCTTCCTGCGAACGACGAACTGGTTTGGGATAATGGAACTCCTTTTCCCGAGCCCTGTATTGATCGCATTGCAGATACGGTTG
GGAAGTACGAAGCCTTAGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAGGCGTCTAAGATTCCATTTGCGCCAAAA
GTGTATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCATAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAATTGCTCTTGAAAAAAAAAAAACCTTAGATTGGGGCTAATTTATTAAGGGCATCGATTACGGTCGGTGTTGCGTAAATATTTTGCCCCACTGCTCTGATTG
TTCTGAAGAACAAGAACTTAAAAACACAGCAACATACGACGATTTTGGAATTTCAAGAGGGGAAAGCACCGAAAATGGCAGGCAGATTGAGCAATTTGGGTTCAAGGATC
CTCGGCGGCAATGGCGTCGTTGGTCGCTCAATCGCTTCATCTCTTCGCCTTCGCTCCGGCATGGGCCTTCCCGTCGGCAAACATATCGTCCCCGATAAACCCCTTCCTGC
GAACGACGAACTGGTTTGGGATAATGGAACTCCTTTTCCCGAGCCCTGTATTGATCGCATTGCAGATACGGTTGGGAAGTACGAAGCCTTAGCTTGGTTATGTGGGGGAT
TGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAGGCGTCTAAGATTCCATTTGCGCCAAAAGTGTATCCATATGACAACCTAAGAGTGGAGCTTGGT
GGAGAACCAGAAGCATAGATAGATAGATCTCACGTTGAATGACCAGTTTGGTACTGTTTCTTCAGATACAAATCCTTATTGAATTGTAAGCATTTGGAATTTGCTATGCA
TCAAAATAATGGATGGAGTTTGTTCCCTCTGCTGAAATTTGTCTTTGGCACTGTGTAAATCACTTCTATATTTTGATTCTTAATGATGAGATTCTAAAGACTTTTTCCAA
TCAATACTAAATAATGTTTCAATAA
Protein sequenceShow/hide protein sequence
MAGRLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPANDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPK
VYPYDNLRVELGGEPEA