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Tan0018056 (gene) of Snake gourd v1 genome

Gene IDTan0018056
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant protein 1589 of unknown function
Genome locationLG02:96740097..96741363
RNA-Seq ExpressionTan0018056
SyntenyTan0018056
Gene Ontology termsNA
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444348.1 PREDICTED: uncharacterized protein LOC103487701 [Cucumis melo]1.8e-3882.47Show/hide
Query:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRYHHCR
        HHFLPCF+C PHAYIRMVQHLIERCLLLHMS DECVKALAHHAN+RPLITLTVWKELQKEN++FF+AYFHTIS NPFLAKFT S   I+RR+Y + R
Subjt:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRYHHCR

XP_022132210.1 uncharacterized protein LOC111005125 [Momordica charantia]3.2e-4080.39Show/hide
Query:  YTYTH-HFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRYHH
        Y+Y+H  FLPCF+CHPHAYIRMVQHLIERCLLLHMS DEC KALAHHAN+RPLITLTVW+ELQKENTEFF++YFH IS  P LAKFTRS+PR+MRRR +H
Subjt:  YTYTH-HFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRYHH

Query:  CR
         R
Subjt:  CR

XP_022961648.1 uncharacterized protein LOC111462356 isoform X2 [Cucurbita moschata]2.1e-3983.51Show/hide
Query:  YTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRY
        Y Y+H FLPCF+CHP AYIR VQHLIERCLLLHMS DECVKALAHHAN+RPLIT TVWKELQKEN EFF+AYF TIS +PFL KFTRSVPRIMRR+Y
Subjt:  YTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRY

XP_023538195.1 uncharacterized protein LOC111799040 isoform X2 [Cucurbita pepo subsp. pepo]8.0e-3978.1Show/hide
Query:  MYPNYTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRR
        M+PN    HHFLPCF+CHPHAYIRM+QHLIERCLLLHMS DECVKALA HAN+RPLITLTVWKELQKENTEFF+AY  TI   PFLAKF RS P I RRR
Subjt:  MYPNYTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRR

Query:  YHHCR
          H R
Subjt:  YHHCR

XP_038884418.1 uncharacterized protein LOC120075271 isoform X1 [Benincasa hispida]1.9e-4081.55Show/hide
Query:  MYPNYTYTHHF-LPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRR
        MYP   + HHF +PCF+CHPHAYIRMVQHLIERCLLLHMS DECVKALAHHAN+RPLITLTVWKELQKEN+EFF+AYFHTIS NPFL KFTR  P  MRR
Subjt:  MYPNYTYTHHF-LPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRR

Query:  RYH
        +YH
Subjt:  RYH

TrEMBL top hitse value%identityAlignment
A0A1S3BA39 uncharacterized protein LOC1034877018.6e-3982.47Show/hide
Query:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRYHHCR
        HHFLPCF+C PHAYIRMVQHLIERCLLLHMS DECVKALAHHAN+RPLITLTVWKELQKEN++FF+AYFHTIS NPFLAKFT S   I+RR+Y + R
Subjt:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRYHHCR

A0A6J1BRT4 uncharacterized protein LOC1110051251.6e-4080.39Show/hide
Query:  YTYTH-HFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRYHH
        Y+Y+H  FLPCF+CHPHAYIRMVQHLIERCLLLHMS DEC KALAHHAN+RPLITLTVW+ELQKENTEFF++YFH IS  P LAKFTRS+PR+MRRR +H
Subjt:  YTYTH-HFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRYHH

Query:  CR
         R
Subjt:  CR

A0A6J1GIJ5 uncharacterized protein LOC1114544741.1e-3877.14Show/hide
Query:  MYPNYTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRR
        M+PN    HHFLPCF+CHPHAYIRM+QHLIERCLLLHMS DECVKAL  HAN+RPLITLTVWKELQKENTEFF+AY  TI   PFLAKF RS P I RRR
Subjt:  MYPNYTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRR

Query:  YHHCR
          H R
Subjt:  YHHCR

A0A6J1HCE7 uncharacterized protein LOC111462356 isoform X21.0e-3983.51Show/hide
Query:  YTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRY
        Y Y+H FLPCF+CHP AYIR VQHLIERCLLLHMS DECVKALAHHAN+RPLIT TVWKELQKEN EFF+AYF TIS +PFL KFTRSVPRIMRR+Y
Subjt:  YTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRRY

A0A6J1KKF7 uncharacterized protein LOC1114965352.5e-3876.19Show/hide
Query:  MYPNYTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRR
        M+PN    HHFLPCF+CHPHA++R +QHLIERCLLLHMS DECVKALA HAN+RPLITLTVWKELQKENTEFF+AY  TI   PFLAKF RSVP I RRR
Subjt:  MYPNYTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRRR

Query:  YHHCR
          H R
Subjt:  YHHCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.1 Plant protein 1589 of unknown function7.0e-2546.96Show/hide
Query:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLT------------------------VWKELQKENTEFFQAYFHTISLNP
        H+ LPC +C PH+YIRMVQH+IERC+LL M+ DECVKAL HHA++ PL+TLT                        VW+ LQ+EN +FF+ Y H +S  P
Subjt:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLT------------------------VWKELQKENTEFFQAYFHTISLNP

Query:  FLAKFTRSVPRIMRR
        FL+ + R  PR  +R
Subjt:  FLAKFTRSVPRIMRR

AT1G10657.2 Plant protein 1589 of unknown function6.1e-2959.34Show/hide
Query:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRR
        H+ LPC +C PH+YIRMVQH+IERC+LL M+ DECVKAL HHA++ PL+TLTVW+ LQ+EN +FF+ Y H +S  PFL+ + R  PR  +R
Subjt:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRIMRR

AT1G10657.3 Plant protein 1589 of unknown function2.6e-2763.75Show/hide
Query:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAK
        H+ LPC +C PH+YIRMVQH+IERC+LL M+ DECVKAL HHA++ PL+TLTVW+ LQ+EN +FF+ Y H +S  PFL+K
Subjt:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAK

AT1G10657.4 Plant protein 1589 of unknown function6.6e-2366.67Show/hide
Query:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQ
        H+ LPC +C PH+YIRMVQH+IERC+LL M+ DECVKAL HHA++ PL+TLTVW+ LQ+EN +FF+
Subjt:  HHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQ

AT3G55240.1 Plant protein 1589 of unknown function2.2e-1867.86Show/hide
Query:  AYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAY
        +YI MVQH+IE+CL+ HMS +ECV+AL+ HAN+ P+IT TVWKEL+KEN EFF+AY
Subjt:  AYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTGTGTAACACACAGATATATTATTATTATTATTATTATGTACCCTAATTACACTTACACCCACCACTTTCTTCCTTGTTTTTATTGTCACCCCCATGCCTATAT
TCGGATGGTCCAACATCTCATTGAGAGATGCTTGCTGCTTCATATGAGCCTAGATGAGTGCGTAAAGGCACTGGCTCACCATGCAAATGTTCGCCCTCTCATAACACTTA
CAGTCTGGAAAGAGCTTCAGAAAGAGAATACTGAATTTTTCCAAGCATATTTCCATACTATATCTCTCAATCCATTCCTGGCCAAATTCACGAGGAGTGTGCCGAGAATA
ATGAGGAGAAGATATCATCACTGTAGGTGA
mRNA sequenceShow/hide mRNA sequence
GATGAGGTGTAGCTATCTCGTTTGGATTGGTTGTGCCATTTTGGCCCTTCACTCAGATATCTGTGGATAATATATATTTCTTCTCTTCTTTTTGCTATAAAAAACACCTG
ACCTAACAAATATCTTCTCCTCTTTAATTTGGCTTATCAACCCGATCCAACCCTTTTGTTCTCTTCTTCCTTCTCTCTGCATCTGCATATATTATATTCATCAAACATTT
CCTTCTTTGACTCTGTACTTTTTACATATTATATATACTCTCTTCCTTTTGTCCCATTTCTATATATAGCTATCATTTTTTTAAGTGAATGAACTGTGTAACACACAGAT
ATATTATTATTATTATTATTATGTACCCTAATTACACTTACACCCACCACTTTCTTCCTTGTTTTTATTGTCACCCCCATGCCTATATTCGGATGGTCCAACATCTCATT
GAGAGATGCTTGCTGCTTCATATGAGCCTAGATGAGTGCGTAAAGGCACTGGCTCACCATGCAAATGTTCGCCCTCTCATAACACTTACAGTCTGGAAAGAGCTTCAGAA
AGAGAATACTGAATTTTTCCAAGCATATTTCCATACTATATCTCTCAATCCATTCCTGGCCAAATTCACGAGGAGTGTGCCGAGAATAATGAGGAGAAGATATCATCACT
GTAGGTGATCGTTTATTTGTAATACATATTATATATTTATATATATATATGCCGATTAATTTTATTTAAACTCTTTCTGCAGCATAATCAAGTAGGTTCTTTTTTTAACT
ATTATTTTGGGAAAAAAAAATGAAGCCGAGTAGAAAATCTGAAGGCTAAATGTAGAGCCTCTTTATGTGTAATCAAATTAAATTGATAAATGGCATATCCATGTGTCCAC
CACTCTCTCTCCGTTGCTG
Protein sequenceShow/hide protein sequence
MNCVTHRYIIIIIIMYPNYTYTHHFLPCFYCHPHAYIRMVQHLIERCLLLHMSLDECVKALAHHANVRPLITLTVWKELQKENTEFFQAYFHTISLNPFLAKFTRSVPRI
MRRRYHHCR