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Tan0018062 (gene) of Snake gourd v1 genome

Gene IDTan0018062
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionVQ domain-containing protein
Genome locationLG05:44564108..44564443
RNA-Seq ExpressionTan0018062
SyntenyTan0018062
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039610 - VQ motif-containing protein 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045761.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]4.0e-1654.78Show/hide
Query:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGS---
        ME H     SFSFY+++     +      K+AVAPP PTPP+VYKV+PINFRDVVQKLT+ PEF D  LQAMP PRPN+++   +S   RD SGEG    
Subjt:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGS---

Query:  VSYNG-YSGDFSERY
        VSY+G + G  SERY
Subjt:  VSYNG-YSGDFSERY

KAE8651906.1 hypothetical protein Csa_006780 [Cucumis sativus]1.3e-1451.35Show/hide
Query:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGSVSY
        ME H     SFSFY+ +      P  +  K+ VAPP P+PP+VYKV+PINFRDVVQKLT+ P+F D  LQAMP PRP+L++   +SS  RD SGEG   +
Subjt:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGSVSY

Query:  NGYSGDFSERY
          + G  S RY
Subjt:  NGYSGDFSERY

KAG6605217.1 hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2777.01Show/hide
Query:  SHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGR
        S+SSSSSSFSFY+S+P+ +HK  +R  K+AVAPPPP PPRVYKVEPI FRDVVQKLTS PE+LDP L+AMPAPRPNLSNPPP SS R
Subjt:  SHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGR

OMO56428.1 VQ motif-containing protein [Corchorus capsularis]9.5e-1048.62Show/hide
Query:  MESHSSSSSSFSFYF-SEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFL-----DPHLQAM-PAPR-PNLSN--------PPP
        ME++SSSSS  S  F S    + KP A+  K+ +AP PPTPP+VYKV+PINFRD+VQKLT  PEF+      P +QA+ PAP  P L +        PPP
Subjt:  MESHSSSSSSFSFYF-SEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFL-----DPHLQAM-PAPR-PNLSN--------PPP

Query:  RSSGRRDFS
         S G    S
Subjt:  RSSGRRDFS

XP_022149539.1 VQ motif-containing protein 29 [Momordica charantia]2.3e-1958.04Show/hide
Query:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGSVSY
        ME HSSSSS              P  +   RAVAP PPTPP++YKV P++FRDVVQKLT+ PEF D  LQAMPAPRP   +PPP S+   DFSGEG+V Y
Subjt:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGSVSY

Query:  NGYSG-DFSERY
         GY G  FSERY
Subjt:  NGYSG-DFSERY

TrEMBL top hitse value%identityAlignment
A0A0A0LPS3 VQ domain-containing protein6.9e-1455.68Show/hide
Query:  PPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGSVSYNGYSGDFSERY
        P  +  K+ VAPP P+PP+VYKV+PINFRDVVQKLT+ P+F D  LQAMP PRP+L++   +SS  RD SGEG   +  + G  S RY
Subjt:  PPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGSVSYNGYSGDFSERY

A0A1R3GE91 VQ motif-containing protein4.6e-1048.62Show/hide
Query:  MESHSSSSSSFSFYF-SEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFL-----DPHLQAM-PAPR-PNLSN--------PPP
        ME++SSSSS  S  F S    + KP A+  K+ +AP PPTPP+VYKV+PINFRD+VQKLT  PEF+      P +QA+ PAP  P L +        PPP
Subjt:  MESHSSSSSSFSFYF-SEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFL-----DPHLQAM-PAPR-PNLSN--------PPP

Query:  RSSGRRDFS
         S G    S
Subjt:  RSSGRRDFS

A0A2N9FPV7 VQ domain-containing protein3.5e-1045Show/hide
Query:  MESHSSSSSSFSF----------------YFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPP
        ME++SSSSSS ++                + S    + KPP++  K+ VAP PPTPPR+YKV+PINFRD+VQKLT   EF    LQ++  P  N+SN  P
Subjt:  MESHSSSSSSFSF----------------YFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPP

A0A5A7TW54 VQ motif-containing protein 291.9e-1654.78Show/hide
Query:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGS---
        ME H     SFSFY+++     +      K+AVAPP PTPP+VYKV+PINFRDVVQKLT+ PEF D  LQAMP PRPN+++   +S   RD SGEG    
Subjt:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGS---

Query:  VSYNG-YSGDFSERY
        VSY+G + G  SERY
Subjt:  VSYNG-YSGDFSERY

A0A6J1D7B4 VQ motif-containing protein 291.1e-1958.04Show/hide
Query:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGSVSY
        ME HSSSSS              P  +   RAVAP PPTPP++YKV P++FRDVVQKLT+ PEF D  LQAMPAPRP   +PPP S+   DFSGEG+V Y
Subjt:  MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGSVSY

Query:  NGYSG-DFSERY
         GY G  FSERY
Subjt:  NGYSG-DFSERY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTCACTCTTCTTCTTCTTCTTCTTTTTCTTTTTACTTCTCGGAGCCGGAGGAGATTCACAAGCCGCCGGCAAGGCTGTTGAAGAGGGCCGTGGCGCCTCCGCC
TCCGACACCGCCACGGGTTTACAAGGTCGAGCCCATCAACTTCCGGGATGTTGTTCAGAAGCTAACTTCACAGCCTGAGTTTCTAGATCCCCACCTTCAAGCCATGCCGG
CTCCTCGCCCCAACCTCTCCAATCCACCGCCGCGTTCTTCCGGCCGTCGGGATTTTTCCGGCGAGGGCTCTGTTTCTTACAATGGGTACTCGGGAGATTTCTCTGAGAGA
TATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTCACTCTTCTTCTTCTTCTTCTTTTTCTTTTTACTTCTCGGAGCCGGAGGAGATTCACAAGCCGCCGGCAAGGCTGTTGAAGAGGGCCGTGGCGCCTCCGCC
TCCGACACCGCCACGGGTTTACAAGGTCGAGCCCATCAACTTCCGGGATGTTGTTCAGAAGCTAACTTCACAGCCTGAGTTTCTAGATCCCCACCTTCAAGCCATGCCGG
CTCCTCGCCCCAACCTCTCCAATCCACCGCCGCGTTCTTCCGGCCGTCGGGATTTTTCCGGCGAGGGCTCTGTTTCTTACAATGGGTACTCGGGAGATTTCTCTGAGAGA
TATTAG
Protein sequenceShow/hide protein sequence
MESHSSSSSSFSFYFSEPEEIHKPPARLLKRAVAPPPPTPPRVYKVEPINFRDVVQKLTSQPEFLDPHLQAMPAPRPNLSNPPPRSSGRRDFSGEGSVSYNGYSGDFSER
Y