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Tan0018067 (gene) of Snake gourd v1 genome

Gene IDTan0018067
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:24286748..24287245
RNA-Seq ExpressionTan0018067
SyntenyTan0018067
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045885.1 hypothetical protein E6C27_scaffold243G004210 [Cucumis melo var. makuwa]9.5e-4275.97Show/hide
Query:  MLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSGGGGGGGD
        MLGKLRGVSCMDRLTRPF YPKSVPVTRLPDG R+VSD PDGSDGILHAGVMMGKDR TDR TR TLVLFF    GGTRE+EDE+EEDCGG GGGGGG +
Subjt:  MLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSGGGGGGGD

Query:  ED-SGGGSSEVVAAMG--AAAVDFGSPIN
        E  +  GS EVV  M   A  VDFGSP++
Subjt:  ED-SGGGSSEVVAAMG--AAAVDFGSPIN

KAE8673967.1 hypothetical protein F3Y22_tig00111769pilonHSYRG00194 [Hibiscus syriacus]3.8e-0640.54Show/hide
Query:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSD-SPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSG
        MA+S T  G+  G+S ++R+T P RYPK V +TR+P+ V  VSD  P G    +  GV MGK+RKT+R  R T    F L      +    ++  CGG G
Subjt:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSD-SPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSG

Query:  GGGGGGDEDSG
        G  G   E+ G
Subjt:  GGGGGGDEDSG

KAG6605299.1 hypothetical protein SDJN03_02616, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3578.99Show/hide
Query:  MDRLTRPFRYPKSVPVTRLPDGVRSVSDSPDGSDGILH-AGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSGGGGGGGDEDSGGGSSE
        MDRLTRPFRYP SVPVTR PD V SVSD PDGSDGILH AGVMMGKDR TDRNTRNTLVLFFFLF GGTRE EDE +E CGGSGGG GG  ED GG  S 
Subjt:  MDRLTRPFRYPKSVPVTRLPDGVRSVSDSPDGSDGILH-AGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSGGGGGGGDEDSGGGSSE

Query:  VVAAMGAAAVDFGSPINRR
             G AAVDFGSPINRR
Subjt:  VVAAMGAAAVDFGSPINRR

KYP69353.1 hypothetical protein KK1_008543 [Cajanus cajan]1.4e-0845.76Show/hide
Query:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLP--DGVRSV------SDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDE
        M SS TM G+  G SC +RLTRP R P  VP T  P    +R          S  G  G L  GVMMG++RKT+RN R  L  + FL  G TRE      
Subjt:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLP--DGVRSV------SDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDE

Query:  EDCGGSGGGGGGGDEDSG
           G  GGGGGGGD D G
Subjt:  EDCGGSGGGGGGGDEDSG

TrEMBL top hitse value%identityAlignment
A0A0A0LMU0 Uncharacterized protein8.4e-4469.13Show/hide
Query:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSGG
        MA+SITMLGKLRGVSC+DRLTRPFRYPKSVPVTRLPDG R+VSD PDG DGILHAGVM+GKDR TDR TR TLVL F    GGTRE+EDE+E+DCGG GG
Subjt:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSGG

Query:  GGGGGDEDSG-GGSSEVVAAMGAAA----VDFGSPINRRVRMAVIVSYW
        GGGG ++ SG  G  EVVA M   A    VDFGSP++     +  +SYW
Subjt:  GGGGGDEDSG-GGSSEVVAAMGAAA----VDFGSPINRRVRMAVIVSYW

A0A151TQN2 Uncharacterized protein6.7e-0945.76Show/hide
Query:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLP--DGVRSV------SDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDE
        M SS TM G+  G SC +RLTRP R P  VP T  P    +R          S  G  G L  GVMMG++RKT+RN R  L  + FL  G TRE      
Subjt:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLP--DGVRSV------SDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDE

Query:  EDCGGSGGGGGGGDEDSG
           G  GGGGGGGD D G
Subjt:  EDCGGSGGGGGGGDEDSG

A0A5D3CQN7 Uncharacterized protein4.6e-4275.97Show/hide
Query:  MLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSGGGGGGGD
        MLGKLRGVSCMDRLTRPF YPKSVPVTRLPDG R+VSD PDGSDGILHAGVMMGKDR TDR TR TLVLFF    GGTRE+EDE+EEDCGG GGGGGG +
Subjt:  MLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSGGGGGGGD

Query:  ED-SGGGSSEVVAAMG--AAAVDFGSPIN
        E  +  GS EVV  M   A  VDFGSP++
Subjt:  ED-SGGGSSEVVAAMG--AAAVDFGSPIN

A0A6A2YFV7 Uncharacterized protein1.8e-0640.54Show/hide
Query:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSD-SPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSG
        MA+S T  G+  G+S ++R+T P RYPK V +TR+P+ V  VSD  P G    +  GV MGK+RKT+R  R T    F L      +    ++  CGG G
Subjt:  MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSD-SPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSG

Query:  GGGGGGDEDSG
        G  G   E+ G
Subjt:  GGGGGGDEDSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGCTCGATCACAATGCTAGGGAAACTTCGTGGTGTCTCTTGCATGGATAGGCTCACGCGCCCCTTTCGGTACCCGAAGAGCGTCCCGGTCACCCGGCTCCCCGA
TGGCGTTCGGAGCGTGTCCGATAGCCCCGACGGTAGCGATGGGATCTTGCATGCTGGTGTTATGATGGGGAAGGATCGGAAAACGGATCGAAATACTCGAAACACTTTGG
TTTTGTTCTTCTTTCTCTTTGTTGGGGGAACAAGGGAGGATGAGGATGAAGACGAGGAAGATTGTGGTGGAAGCGGCGGAGGTGGTGGTGGTGGCGATGAAGATTCTGGC
GGTGGTTCTAGCGAGGTCGTGGCGGCGATGGGGGCAGCGGCGGTGGATTTTGGGTCTCCCATCAACCGACGGGTGAGGATGGCCGTTATAGTTAGTTATTGGCATGTGTT
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGCTCGATCACAATGCTAGGGAAACTTCGTGGTGTCTCTTGCATGGATAGGCTCACGCGCCCCTTTCGGTACCCGAAGAGCGTCCCGGTCACCCGGCTCCCCGA
TGGCGTTCGGAGCGTGTCCGATAGCCCCGACGGTAGCGATGGGATCTTGCATGCTGGTGTTATGATGGGGAAGGATCGGAAAACGGATCGAAATACTCGAAACACTTTGG
TTTTGTTCTTCTTTCTCTTTGTTGGGGGAACAAGGGAGGATGAGGATGAAGACGAGGAAGATTGTGGTGGAAGCGGCGGAGGTGGTGGTGGTGGCGATGAAGATTCTGGC
GGTGGTTCTAGCGAGGTCGTGGCGGCGATGGGGGCAGCGGCGGTGGATTTTGGGTCTCCCATCAACCGACGGGTGAGGATGGCCGTTATAGTTAGTTATTGGCATGTGTT
TTAG
Protein sequenceShow/hide protein sequence
MASSITMLGKLRGVSCMDRLTRPFRYPKSVPVTRLPDGVRSVSDSPDGSDGILHAGVMMGKDRKTDRNTRNTLVLFFFLFVGGTREDEDEDEEDCGGSGGGGGGGDEDSG
GGSSEVVAAMGAAAVDFGSPINRRVRMAVIVSYWHVF