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Tan0018084 (gene) of Snake gourd v1 genome

Gene IDTan0018084
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionBromo domain-containing protein
Genome locationLG07:69373509..69378007
RNA-Seq ExpressionTan0018084
SyntenyTan0018084
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]4.6e-1573.44Show/hide
Query:  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQEFE
        Q+++G LDMNED IFVQVFGPEK+G VRGYGVGVTP ELF SSS V DLE  LNE E RL E E
Subjt:  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQEFE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]2.7e-1570.97Show/hide
Query:  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ
        +Y  Q++DGTLDMN+D IFVQ+ GPEK+  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ

KAF3956246.1 hypothetical protein CMV_018610 [Castanea mollissima]2.3e-1442.86Show/hide
Query:  NGQCMVKNLLKKKCRNSNYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSS-NVRDLERRLNESEQRLQEFERQR-------KIEV
        NGQ + ++         N   Q+ +G L +++D++FV+VFGPE++GRVRGYG GVTP+ L+GSSS  + DLE+RL ESEQ+  E E +R       K EV
Subjt:  NGQCMVKNLLKKKCRNSNYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSS-NVRDLERRLNESEQRLQEFERQR-------KIEV

Query:  QAFKD-------QIVELENHFEDRFKTMMAEMR
        +  K        Q+VE   HFE++  + MAE R
Subjt:  QAFKD-------QIVELENHFEDRFKTMMAEMR

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]3.2e-1672.58Show/hide
Query:  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ
        +Y  Q++DGTLDMN+D IFVQ+FGPEK+  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]1.4e-3262.99Show/hide
Query:  NGQCMVKNLLKKKCRNSNYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQEFERQRK-------IEVQ
        NG  + +   +K  +  +Y  Q++DGTLDMNED+ FV+VFGPEK+G V GYGVGVTPSELFGSSS +RD ERRLNESEQRLQEFE+QRK       +EV+
Subjt:  NGQCMVKNLLKKKCRNSNYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQEFERQRK-------IEVQ

Query:  AFKDQIVELENHFEDRFKTMMAEMRKQ
          K QI ELEN FEDRF+ MMAEM K+
Subjt:  AFKDQIVELENHFEDRFKTMMAEMRKQ

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968281.6e-1672.58Show/hide
Query:  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ
        +Y  Q++DGTLDMN+D IFVQ+FGPEK+  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ

A0A2N9GUC6 Uncharacterized protein4.2e-1447.31Show/hide
Query:  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQRLQEFERQRKIEVQAFKDQIVELENHFEDRFKTM
        Q+ +G+L M+ED++FV+VFGPE++GRVRGYG GVT ++L+GSSS+ + DLE+RL ESEQ   E   +   +V+  ++Q+++L++  E+R   M
Subjt:  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQRLQEFERQRKIEVQAFKDQIVELENHFEDRFKTM

A0A2N9HCP8 Uncharacterized protein4.2e-1447.31Show/hide
Query:  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQRLQEFERQRKIEVQAFKDQIVELENHFEDRFKTM
        Q+ +G+L M+ED++FV+VFGPE++GRVRGYG GVT ++L+GSSS+ + DLE+RL ESEQ   E   +   +V+  ++Q+++L++  E+R   M
Subjt:  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQRLQEFERQRKIEVQAFKDQIVELENHFEDRFKTM

A0A5A7U8E9 Uncharacterized protein2.2e-1573.44Show/hide
Query:  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQEFE
        Q+++G LDMNED IFVQVFGPEK+G VRGYGVGVTP ELF SSS V DLE  LNE E RL E E
Subjt:  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQEFE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X21.3e-1570.97Show/hide
Query:  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ
        +Y  Q++DGTLDMN+D IFVQ+ GPEK+  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30130.1 unknown protein1.3e-0785.19Show/hide
Query:  PWGERVSFVFNPNSDLVAKSLHVSPFM
        PWGERV+FVF+P SDLVAKSL VSPFM
Subjt:  PWGERVSFVFNPNSDLVAKSLHVSPFM

AT1G30130.2 unknown protein1.3e-0785.19Show/hide
Query:  PWGERVSFVFNPNSDLVAKSLHVSPFM
        PWGERV+FVF+P SDLVAKSL VSPFM
Subjt:  PWGERVSFVFNPNSDLVAKSLHVSPFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATGGGGTGAGAGAGTCTCATTTGTTTTCAATCCAAATTCTGATTTAGTAGCTAAGTCGTTGCATGTCAGTCCTTTTATGTTCCAAGTTATACTCAATGGACAATG
CATGGTGAAGAATCTACTCAAGAAAAAATGTCGTAACTCAAATTATATGCCTCAAATGGTTGATGGTACACTTGACATGAACGAGGACAAGATTTTTGTGCAAGTTTTTG
GACCAGAGAAGTATGGACGTGTTCGTGGTTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAGCGTCGTCTTAATGAGTCA
GAACAACGTCTTCAAGAATTTGAACGACAAAGAAAAATCGAGGTACAAGCCTTCAAAGATCAAATTGTTGAATTAGAAAATCATTTTGAGGATAGATTTAAAACAATGAT
GGCAGAGATGCGTAAACAATAG
mRNA sequenceShow/hide mRNA sequence
CTTCAATCGCTTCATCCTCTTCAGCCGCCCTCCTTCGTTTCGAACCCAGTTTCGCGCCCCAGTGCAACTTGCCCATCGACCACACAACAGCCAGCCGATACGTTCCGGTC
TGACCAACGTAACCTCGCAGATCTTTTCATCACCCGTCGCCAGCCTTCAGCCGGAGTTTCGTCCGAACCGTCCGCGACCATGACCACACGCAGGAGTCTCGATCGCCGTC
ACGCTCGCAGTCGCGACCCACTGTTGACCAACCGAGCTTCACCGAAATGACTTGTTAAAGCTTATGGCTAGAGAAATACATATGGCTAGAGAAATACCTATACAAGAAAG
TCAGTGTGAAAGAGTTCTCTTCTGACGATTCCGACCAGTGTGGAATATGAACAAAATCCATTGAGTTACTGCTACGAAATCGAAGACTCTGTGCAGCACTTGAAGAAGTG
CATAGTTGAGGTGACAAATATGCCATGGGGTGAGAGAGTCTCATTTGTTTTCAATCCAAATTCTGATTTAGTAGCTAAGTCGTTGCATGTCAGTCCTTTTATGTTCCAAG
TTATACTCAATGGACAATGCATGGTGAAGAATCTACTCAAGAAAAAATGTCGTAACTCAAATTATATGCCTCAAATGGTTGATGGTACACTTGACATGAACGAGGACAAG
ATTTTTGTGCAAGTTTTTGGACCAGAGAAGTATGGACGTGTTCGTGGTTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGA
GCGTCGTCTTAATGAGTCAGAACAACGTCTTCAAGAATTTGAACGACAAAGAAAAATCGAGGTACAAGCCTTCAAAGATCAAATTGTTGAATTAGAAAATCATTTTGAGG
ATAGATTTAAAACAATGATGGCAGAGATGCGTAAACAATAG
Protein sequenceShow/hide protein sequence
MPWGERVSFVFNPNSDLVAKSLHVSPFMFQVILNGQCMVKNLLKKKCRNSNYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNES
EQRLQEFERQRKIEVQAFKDQIVELENHFEDRFKTMMAEMRKQ