; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018102 (gene) of Snake gourd v1 genome

Gene IDTan0018102
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG01:39378235..39379722
RNA-Seq ExpressionTan0018102
SyntenyTan0018102
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64330.1 hypothetical protein VITISV_014666 [Vitis vinifera]1.2e-1536.8Show/hide
Query:  KSRNSSVKSVNI-----EQNVANVNYEAQPQSPT------QTDMENRSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLI
        K+ +S+ K++N+      +NV  +    + + P       +   ++R+ N++P+P+ PD+Q+EE++QI Q+ YDG  I+EWN+DG+SD+ ++N++ EM++
Subjt:  KSRNSSVKSVNI-----EQNVANVNYEAQPQSPT------QTDMENRSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLI

Query:  ASNAYRQRGKRDHEIAQLLVAGFTG
        AS AY+ R   D  I   L+AGFTG
Subjt:  ASNAYRQRGKRDHEIAQLLVAGFTG

CAN67572.1 hypothetical protein VITISV_036870 [Vitis vinifera]3.4e-1830.85Show/hide
Query:  MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAFNPPKRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKSVNIEQN
        MNT++   AL +SPKG T    ++ LDKS   +PK + W+ +     W                    H   A+   +++ +  + S   + + + + + 
Subjt:  MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAFNPPKRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKSVNIEQN

Query:  VANVNYEAQPQSPTQTDMEN-RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFT
                +P +    ++E  ++ N+YP+P+FPD+QFEE+ Q TQA Y    I+EWN+DG+++Y I+  + EM + S AY+   +  DH +AQ +VAGFT
Subjt:  VANVNYEAQPQSPTQTDMEN-RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFT

Query:  G
        G
Subjt:  G

CAN75928.1 hypothetical protein VITISV_021028 [Vitis vinifera]6.2e-2030.08Show/hide
Query:  MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAFNP-PKRNSNLAQIIEHTDG--------ALKYNSRKKQRLLKSRNSS
        MNT++   AL +SPKG T    ++ LDKS   +PK + W+ +     W    A     +R+ ++ QI+++ DG        + +++S  +  + +   +S
Subjt:  MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAFNP-PKRNSNLAQIIEHTDG--------ALKYNSRKKQRLLKSRNSS

Query:  VKSVNIEQ----------NVANVNYEAQPQSPTQTD----------------MEN-RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYL
          S+ +            N  NV       S  + D                +E  ++ N+YP+P+FPD+QFEE+ Q TQA Y    I+EWN+D +++Y 
Subjt:  VKSVNIEQ----------NVANVNYEAQPQSPTQTD----------------MEN-RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYL

Query:  IINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFTG
        I+  + EM + S AY+   +  DH +AQ +VAGFTG
Subjt:  IINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFTG

RVX10070.1 hypothetical protein CK203_013013 [Vitis vinifera]2.6e-1829.24Show/hide
Query:  TILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFN------------------------PPKRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKS
        T+L +AN   SS+  P  + W  +T + TW   +                           PPK     ++I           S   +  L SR   VK 
Subjt:  TILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFN------------------------PPKRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKS

Query:  VNIE--QNVANVNYEAQ----PQSPTQTDM-------------------------ENRSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDY
         N++   N+    Y  Q    P SPT + M                         ++R+ N++P+P+ PD+Q+EE++QI Q+ YDG  I+EWN+DG+SD+
Subjt:  VNIE--QNVANVNYEAQ----PQSPTQTDM-------------------------ENRSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDY

Query:  LIINVINEMLIASNAYRQRGKRDHEIAQLLVAGFTG
         ++N++ EM++AS AY+ R   D  I   L+AGFTG
Subjt:  LIINVINEMLIASNAYRQRGKRDHEIAQLLVAGFTG

XP_023520850.1 uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo]1.1e-2446.98Show/hide
Query:  KRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKSVNIEQNVANVNYE------AQPQSPTQTDMENRSINWYPQPSFPDIQFEEKTQITQAVYDGLA
        K  + +A+I E  D  L      +   +   N+  ++   E  +AN   E       +    +Q +  N+  NWYPQPSFPDIQFEEKT  TQA YDGLA
Subjt:  KRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKSVNIEQNVANVNYE------AQPQSPTQTDMENRSINWYPQPSFPDIQFEEKTQITQAVYDGLA

Query:  IHEWNVDGISDYLIINVINEMLIASNAYRQRG-KRDHEIAQLLVAGFTG
        I+EWN+DG+SDYLI+NV+NEM++A+ AY+ +G K DH+IAQ+LV GFTG
Subjt:  IHEWNVDGISDYLIINVINEMLIASNAYRQRG-KRDHEIAQLLVAGFTG

TrEMBL top hitse value%identityAlignment
A0A251VET5 Putative reverse transcriptase domain, Zinc finger, CCHC-type, Aspartic peptidase domain protein4.5e-1631.72Show/hide
Query:  IEANLDKSSITVPKSLSWEQIT---RNPTWKLTEAFNPPKRN--SNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKSVNIEQNVANV---NYEAQPQSP
        IE N +K+++  P + + + IT    NP +K      P + N   ++ Q I      L  N    Q  ++S         IE ++  +   NY+    + 
Subjt:  IEANLDKSSITVPKSLSWEQIT---RNPTWKLTEAFNPPKRN--SNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKSVNIEQNVANV---NYEAQPQSP

Query:  TQTDMENRSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAQLLVAGFTG
          T  E R  N+YP+P+ PD+QFEE+  + QA YDG +++EWN++G +++ I+N++ EM++A+NAY+  G  + +I  ++V+GFTG
Subjt:  TQTDMENRSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAQLLVAGFTG

A0A438JM71 Uncharacterized protein1.3e-1829.24Show/hide
Query:  TILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFN------------------------PPKRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKS
        T+L +AN   SS+  P  + W  +T + TW   +                           PPK     ++I           S   +  L SR   VK 
Subjt:  TILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFN------------------------PPKRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKS

Query:  VNIE--QNVANVNYEAQ----PQSPTQTDM-------------------------ENRSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDY
         N++   N+    Y  Q    P SPT + M                         ++R+ N++P+P+ PD+Q+EE++QI Q+ YDG  I+EWN+DG+SD+
Subjt:  VNIE--QNVANVNYEAQ----PQSPTQTDM-------------------------ENRSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDY

Query:  LIINVINEMLIASNAYRQRGKRDHEIAQLLVAGFTG
         ++N++ EM++AS AY+ R   D  I   L+AGFTG
Subjt:  LIINVINEMLIASNAYRQRGKRDHEIAQLLVAGFTG

A5AQL0 CCHC-type domain-containing protein3.0e-2030.08Show/hide
Query:  MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAFNP-PKRNSNLAQIIEHTDG--------ALKYNSRKKQRLLKSRNSS
        MNT++   AL +SPKG T    ++ LDKS   +PK + W+ +     W    A     +R+ ++ QI+++ DG        + +++S  +  + +   +S
Subjt:  MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAFNP-PKRNSNLAQIIEHTDG--------ALKYNSRKKQRLLKSRNSS

Query:  VKSVNIEQ----------NVANVNYEAQPQSPTQTD----------------MEN-RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYL
          S+ +            N  NV       S  + D                +E  ++ N+YP+P+FPD+QFEE+ Q TQA Y    I+EWN+D +++Y 
Subjt:  VKSVNIEQ----------NVANVNYEAQPQSPTQTD----------------MEN-RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYL

Query:  IINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFTG
        I+  + EM + S AY+   +  DH +AQ +VAGFTG
Subjt:  IINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFTG

A5B688 CCHC-type domain-containing protein1.6e-1830.85Show/hide
Query:  MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAFNPPKRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKSVNIEQN
        MNT++   AL +SPKG T    ++ LDKS   +PK + W+ +     W                    H   A+   +++ +  + S   + + + + + 
Subjt:  MNTNISPRALRSSPKGSTILIEAN-LDKSSITVPKSLSWEQITRNPTWKLTEAFNPPKRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKSVNIEQN

Query:  VANVNYEAQPQSPTQTDMEN-RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFT
                +P +    ++E  ++ N+YP+P+FPD+QFEE+ Q TQA Y    I+EWN+DG+++Y I+  + EM + S AY+   +  DH +AQ +VAGFT
Subjt:  VANVNYEAQPQSPTQTDMEN-RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGK-RDHEIAQLLVAGFT

Query:  G
        G
Subjt:  G

M5XBI0 Uncharacterized protein2.4e-1731.75Show/hide
Query:  MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAF-------NPPKRNSNLAQIIEHTDGALKYNSRKKQRLLKS-RNSSVK
        MNT + P+A     KG T L + NL+KS++ +PK + W  IT    W L E           PKR S LA   +    A    +   +   KS R +S +
Subjt:  MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAF-------NPPKRNSNLAQIIEHTDGALKYNSRKKQRLLKS-RNSSVK

Query:  SVNIEQNVANVNYEAQPQSPTQTDMEN-----RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHE
         +    N+  +  E Q +    T  +      ++ N+YP+P+  D+QFEE        YD  +I EWN+DG+++Y IIN +  M++ + A + +G RD  
Subjt:  SVNIEQNVANVNYEAQPQSPTQTDMEN-----RSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHE

Query:  IAQLLVAGFTG
        +A+ ++AGF G
Subjt:  IAQLLVAGFTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACAAACATTTCTCCAAGAGCTTTAAGGTCTTCCCCAAAGGGATCAACAATCCTTATAGAAGCAAATCTAGATAAGTCCTCAATTACTGTCCCAAAAAGTTTATC
TTGGGAACAAATCACTAGAAATCCAACGTGGAAGCTTACGGAAGCTTTCAATCCACCAAAAAGAAATTCAAATTTAGCCCAAATTATCGAACATACAGATGGGGCATTGA
AATACAATTCTCGGAAAAAGCAGAGGTTACTAAAGTCAAGGAATTCATCAGTAAAGTCAGTCAATATAGAACAAAATGTAGCAAATGTTAATTATGAAGCACAACCACAA
TCTCCAACCCAAACAGACATGGAAAATCGATCTATAAACTGGTATCCTCAACCATCATTCCCAGATATTCAATTTGAGGAAAAAACACAAATAACTCAAGCCGTTTATGA
TGGATTAGCCATCCACGAATGGAATGTGGACGGAATATCTGATTATCTAATCATAAACGTAATAAACGAGATGTTGATCGCCTCCAATGCCTATAGACAAAGAGGTAAAA
GAGATCATGAGATAGCACAACTTCTCGTTGCCGGATTCACAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATACAAACATTTCTCCAAGAGCTTTAAGGTCTTCCCCAAAGGGATCAACAATCCTTATAGAAGCAAATCTAGATAAGTCCTCAATTACTGTCCCAAAAAGTTTATC
TTGGGAACAAATCACTAGAAATCCAACGTGGAAGCTTACGGAAGCTTTCAATCCACCAAAAAGAAATTCAAATTTAGCCCAAATTATCGAACATACAGATGGGGCATTGA
AATACAATTCTCGGAAAAAGCAGAGGTTACTAAAGTCAAGGAATTCATCAGTAAAGTCAGTCAATATAGAACAAAATGTAGCAAATGTTAATTATGAAGCACAACCACAA
TCTCCAACCCAAACAGACATGGAAAATCGATCTATAAACTGGTATCCTCAACCATCATTCCCAGATATTCAATTTGAGGAAAAAACACAAATAACTCAAGCCGTTTATGA
TGGATTAGCCATCCACGAATGGAATGTGGACGGAATATCTGATTATCTAATCATAAACGTAATAAACGAGATGTTGATCGCCTCCAATGCCTATAGACAAAGAGGTAAAA
GAGATCATGAGATAGCACAACTTCTCGTTGCCGGATTCACAGGATAA
Protein sequenceShow/hide protein sequence
MNTNISPRALRSSPKGSTILIEANLDKSSITVPKSLSWEQITRNPTWKLTEAFNPPKRNSNLAQIIEHTDGALKYNSRKKQRLLKSRNSSVKSVNIEQNVANVNYEAQPQ
SPTQTDMENRSINWYPQPSFPDIQFEEKTQITQAVYDGLAIHEWNVDGISDYLIINVINEMLIASNAYRQRGKRDHEIAQLLVAGFTG