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Tan0018133 (gene) of Snake gourd v1 genome

Gene IDTan0018133
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:81415844..81416236
RNA-Seq ExpressionTan0018133
SyntenyTan0018133
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650755.1 hypothetical protein Csa_023869, partial [Cucumis sativus]1.9e-0751.28Show/hide
Query:  WGIIGLAKRGAGMVIGVLNIGIKLMVEIGAVVVGGPRRRRGRMAVPLQFRIIGIEQRKITRG----LRTNWRIEDKDE
        WG     ++GAGMVIGVLNIGIKL++EIG+ VVG PRR  GR  VPLQF   G+EQ +  +G    +    R+E+++E
Subjt:  WGIIGLAKRGAGMVIGVLNIGIKLMVEIGAVVVGGPRRRRGRMAVPLQFRIIGIEQRKITRG----LRTNWRIEDKDE
TrEMBL top hitse value%identityAlignment
A0A0A0LDH3 Uncharacterized protein6.5e-1457.41Show/hide
Query:  MIVELRMVPVILLVLVRLLVLRWCGMVRVLWGIIGLAKRGAGMVIGVLNIGIKLMVEIGAVVVGGPRRRRGRMAVPLQFRIIGIEQRKITRG----LRTN
        MIVELRMVPVI+LVL+ +LV     +V VL GIIG+ KRG GMVIGVLNIGIKL++EIG+ VVG PRR  GR  VPLQF   G+EQ +  +G    +   
Subjt:  MIVELRMVPVILLVLVRLLVLRWCGMVRVLWGIIGLAKRGAGMVIGVLNIGIKLMVEIGAVVVGGPRRRRGRMAVPLQFRIIGIEQRKITRG----LRTN

Query:  WRIEDKDE
         R+E+++E
Subjt:  WRIEDKDE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTGGAACTCCGGATGGTTCCAGTTATTCTGCTGGTGCTGGTACGGCTGCTGGTGCTGCGGTGGTGCGGGATGGTGCGGGTACTGTGGGGGATAATTGGGCTGGC
CAAAAGGGGGGCCGGAATGGTGATTGGGGTATTGAACATAGGGATCAAACTGATGGTTGAAATTGGGGCGGTGGTCGTCGGAGGGCCACGGCGGCGCCGAGGAAGAATGG
CGGTGCCTCTCCAGTTTCGAATAATTGGAATCGAACAACGGAAAATTACTCGAGGCCTGAGGACGAACTGGCGAATCGAAGACAAAGACGAAGCTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTGGAACTCCGGATGGTTCCAGTTATTCTGCTGGTGCTGGTACGGCTGCTGGTGCTGCGGTGGTGCGGGATGGTGCGGGTACTGTGGGGGATAATTGGGCTGGC
CAAAAGGGGGGCCGGAATGGTGATTGGGGTATTGAACATAGGGATCAAACTGATGGTTGAAATTGGGGCGGTGGTCGTCGGAGGGCCACGGCGGCGCCGAGGAAGAATGG
CGGTGCCTCTCCAGTTTCGAATAATTGGAATCGAACAACGGAAAATTACTCGAGGCCTGAGGACGAACTGGCGAATCGAAGACAAAGACGAAGCTAGATGA
Protein sequenceShow/hide protein sequence
MIVELRMVPVILLVLVRLLVLRWCGMVRVLWGIIGLAKRGAGMVIGVLNIGIKLMVEIGAVVVGGPRRRRGRMAVPLQFRIIGIEQRKITRGLRTNWRIEDKDEAR