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Tan0018136 (gene) of Snake gourd v1 genome

Gene IDTan0018136
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:2071894..2072776
RNA-Seq ExpressionTan0018136
SyntenyTan0018136
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035320.1 hypothetical protein E6C27_scaffold228G001200 [Cucumis melo var. makuwa]1.4e-1057.32Show/hide
Query:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSADREIGFTSNIQEAIIRDGDLDDFC-ENNF-TCAAKAA
        MQSK GS GLPLC+S F+LS+ SLST++ADHDRRREAM   ++   R         EA IR+GDL+DF  E +F  CAAKAA
Subjt:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSADREIGFTSNIQEAIIRDGDLDDFC-ENNF-TCAAKAA

KAB2606712.1 hypothetical protein D8674_006429 [Pyrus ussuriensis x Pyrus communis]2.2e-0846.94Show/hide
Query:  MQSKF---GSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSS------ADREIGF---TSNIQEAIIRDGD------LDDFCENNFTCAAKAA
        MQS F   GS GLPLC+SG +  H + S EMADHDRRREAMRR+RS       A++E+GF   +  + E  I+  D      L D C +   C AKAA
Subjt:  MQSKF---GSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSS------ADREIGF---TSNIQEAIIRDGD------LDDFCENNFTCAAKAA

KAG6605527.1 hypothetical protein SDJN03_02844, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1466.27Show/hide
Query:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSA--DREIGFTSNIQEAIIRDGDLDDFCE-NNFTCAAKAA
        M SK  S GLPLCLSGFSLSH  L+TEM DHDRRREAMRR+RSS+     IGFT  I +A I DGDL D CE    T AAKAA
Subjt:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSA--DREIGFTSNIQEAIIRDGDLDDFCE-NNFTCAAKAA

KGN47309.1 hypothetical protein Csa_022984 [Cucumis sativus]1.2e-1156.1Show/hide
Query:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSADREIGFTSNIQEAIIRDGDLDDFCENN--FTCAAKAA
        MQSK GS GLPLC+S F+LS+ SLST++ADHDRRREAM   ++   R       + EA IR+GDL+DF   N    CAAKAA
Subjt:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSADREIGFTSNIQEAIIRDGDLDDFCENN--FTCAAKAA

XP_023006923.1 uncharacterized protein LOC111499567 [Cucurbita maxima]4.1e-1571.08Show/hide
Query:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQR-SSADR-EIGFTSNIQEAIIRDGDLDDFCE-NNFTCAAKAA
        M SK  S GLPLCLSGFSLSH SLSTEM DHDRRREAMRR+R SSAD   IGFT  I +A I DGDL D CE    T AAKAA
Subjt:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQR-SSADR-EIGFTSNIQEAIIRDGDLDDFCE-NNFTCAAKAA

TrEMBL top hitse value%identityAlignment
A0A0A0KEP9 Uncharacterized protein6.0e-1256.1Show/hide
Query:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSADREIGFTSNIQEAIIRDGDLDDFCENN--FTCAAKAA
        MQSK GS GLPLC+S F+LS+ SLST++ADHDRRREAM   ++   R       + EA IR+GDL+DF   N    CAAKAA
Subjt:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSADREIGFTSNIQEAIIRDGDLDDFCENN--FTCAAKAA

A0A498KGC9 Uncharacterized protein1.4e-0845.26Show/hide
Query:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSS------ADREIGFTSNIQEAIIR-----DGD----LDDFCENNFTCAAKAA
        M +  GS GLPLC+SG S  H + S EMADHDRRREAM+R+RS       A++E+GF    +          DGD    L D C +   C AKAA
Subjt:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSS------ADREIGFTSNIQEAIIR-----DGD----LDDFCENNFTCAAKAA

A0A5D3CSY7 Uncharacterized protein6.7e-1157.32Show/hide
Query:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSADREIGFTSNIQEAIIRDGDLDDFC-ENNF-TCAAKAA
        MQSK GS GLPLC+S F+LS+ SLST++ADHDRRREAM   ++   R         EA IR+GDL+DF  E +F  CAAKAA
Subjt:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSADREIGFTSNIQEAIIRDGDLDDFC-ENNF-TCAAKAA

A0A5N5FZY2 Uncharacterized protein1.1e-0846.94Show/hide
Query:  MQSKF---GSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSS------ADREIGF---TSNIQEAIIRDGD------LDDFCENNFTCAAKAA
        MQS F   GS GLPLC+SG +  H + S EMADHDRRREAMRR+RS       A++E+GF   +  + E  I+  D      L D C +   C AKAA
Subjt:  MQSKF---GSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSS------ADREIGF---TSNIQEAIIRDGD------LDDFCENNFTCAAKAA

A0A6J1L6A3 uncharacterized protein LOC1114995672.0e-1571.08Show/hide
Query:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQR-SSADR-EIGFTSNIQEAIIRDGDLDDFCE-NNFTCAAKAA
        M SK  S GLPLCLSGFSLSH SLSTEM DHDRRREAMRR+R SSAD   IGFT  I +A I DGDL D CE    T AAKAA
Subjt:  MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQR-SSADR-EIGFTSNIQEAIIRDGDLDDFCE-NNFTCAAKAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G60400.3 unknown protein9.2e-0553.85Show/hide
Query:  GSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSS
        G++G PLC+SG +    SLS EMADHD+RR+ ++R+R S
Subjt:  GSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCCAAGTTCGGGTCTCATGGTCTTCCTCTCTGTCTTTCGGGGTTCAGTCTCTCTCATCCTTCTCTCTCTACTGAGATGGCAGATCATGATCGCAGAAGGGAAGC
CATGAGAAGGCAAAGATCAAGCGCAGATCGAGAAATTGGCTTCACCAGTAACATCCAAGAAGCGATTATTAGAGATGGAGATCTTGATGATTTCTGTGAAAACAACTTCA
CTTGTGCTGCAAAAGCCGCTTAG
mRNA sequenceShow/hide mRNA sequence
CTTTTATCACGCACCAAAGCGCCCACAATCCCCAAAAAAAGGCCCAAAACCAAAAAGAAAATAAAAACCCATGCTTTAGTTTTCTTTTTCTTACTGTTCTTCTCCCATCA
AACAAACGAAAATCAGAGCTCTTCTTCTTCTTCTTCTTCTTCCTGTGGAGAAAAATGCAATCCAAGTTCGGGTCTCATGGTCTTCCTCTCTGTCTTTCGGGGTTCAGTCT
CTCTCATCCTTCTCTCTCTACTGAGATGGCAGATCATGATCGCAGAAGGGAAGCCATGAGAAGGCAAAGATCAAGCGCAGATCGAGAAATTGGCTTCACCAGTAACATCC
AAGAAGCGATTATTAGAGATGGAGATCTTGATGATTTCTGTGAAAACAACTTCACTTGTGCTGCAAAAGCCGCTTAGTTTCTGAATGAATGTTGATGTTGTTTCTTCTTT
TGATATATTATTGTTTTGAACTTGTGTTTGGATTGGATCTGTCTTTTACTATTTTTGTCAATTCTGATCTGGGTTCTATGTATTGTTCTCATTTCAATTGTTTCAATGTA
TTTTCTTTTTCCATTTTTGGAGTTGGGGTTCTTCATGTTTGTTTGCCACTCCAATGAAGAGAAAGAGAAAGAAAATGGGTAGTTTTGGCTCTAAATGGTCGAGAATTTGA
TATGTTTATGGTTGGAATCTTTGCAAAAACCAAGAACTTTTTTGTCATCTAGTAGATTCTATTTGGAGATGTAACGAGTCCTCAAAGCAAAATTATGAATAACTCATCAA
GGAAGAGAAGTTAGAAAGGGACGGGAGA
Protein sequenceShow/hide protein sequence
MQSKFGSHGLPLCLSGFSLSHPSLSTEMADHDRRREAMRRQRSSADREIGFTSNIQEAIIRDGDLDDFCENNFTCAAKAA