; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018150 (gene) of Snake gourd v1 genome

Gene IDTan0018150
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationContig00117:267073..267775
RNA-Seq ExpressionTan0018150
SyntenyTan0018150
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645820.1 hypothetical protein Csa_017234 [Cucumis sativus]8.2e-2357.28Show/hide
Query:  MSCATIGNNVGQQEEERNDMKKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWY-VNFGDHKQYRFFLEKDDVCPGDEHVYEVIV
        MSC     +V  + E + D KKGYV ITW PI NLE+P VQ++VKF VEE NK YK+HWKLK +QQ WY +  G   QYRF LE+D V PGDE +YE IV
Subjt:  MSCATIGNNVGQQEEERNDMKKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWY-VNFGDHKQYRFFLEKDDVCPGDEHVYEVIV

Query:  SAK
        S +
Subjt:  SAK

KAG6571860.1 hypothetical protein SDJN03_28588, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2756.9Show/hide
Query:  NVGQQEEERNDM---KKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNFGDHKQYRFFLEKDDVCPGDEHVYEVIVSAKKYG
        + GQ  +  +DM   KKG+VWITW  I N+E+  VQ+I KFAVEE NKKYK+ WK K IQQ WY    D  QYRF LE+DDV PGD+ VY+ IVS K  G
Subjt:  NVGQQEEERNDM---KKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNFGDHKQYRFFLEKDDVCPGDEHVYEVIVSAKKYG

Query:  FITIKDLILFMRYFKF
            K+LILFM YFK+
Subjt:  FITIKDLILFMRYFKF

KAG6588756.1 hypothetical protein SDJN03_17321, partial [Cucurbita argyrosperma subsp. sororia]2.2e-0439.47Show/hide
Query:  WIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNF-GDHKQYRFFLEKDDVCPGDEHVYEVIVSAKK
        WIPI N+ +  VQ++ KFAVE+ N ++KE +K K I+  W++   G+   +R  +E  D C G     +V+VS KK
Subjt:  WIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNF-GDHKQYRFFLEKDDVCPGDEHVYEVIVSAKK

KAG6588757.1 hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia]6.5e-0439.47Show/hide
Query:  WIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNF-GDHKQYRFFLEKDDVCPGDEHVYEVIVSAKK
        WI I ++ +  VQ++ KFAVE+ N  +KE +K K I+  W++   G+   YR  +E  D C G   V +V+VS KK
Subjt:  WIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNF-GDHKQYRFFLEKDDVCPGDEHVYEVIVSAKK

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTGCAACGATTGGGAATAATGTTGGTCAACAAGAGGAGGAGAGAAATGATATGAAGAAGGGATACGTATGGATCACATGGATACCAATTTCGAACCTTGAGGA
TCCGTTGGTGCAAGATATTGTAAAATTCGCAGTGGAAGAACAGAATAAGAAATATAAAGAACATTGGAAACTCAAGTGCATTCAACAAGCTTGGTACGTGAACTTTGGAG
ATCACAAACAATATCGTTTCTTTTTAGAGAAAGATGATGTTTGTCCAGGAGATGAGCACGTATATGAGGTCATTGTCTCCGCAAAAAAATATGGTTTTATAACAATCAAG
GATCTCATACTTTTCATGCGATACTTCAAATTCTGA
mRNA sequenceShow/hide mRNA sequence
TGAAGAAGTGAAATCATAGGAATGAAAAATTGCAATAATATATACAATGAGTTGTGCAACGATTGGGAATAATGTTGGTCAACAAGAGGAGGAGAGAAATGATATGAAGA
AGGGATACGTATGGATCACATGGATACCAATTTCGAACCTTGAGGATCCGTTGGTGCAAGATATTGTAAAATTCGCAGTGGAAGAACAGAATAAGAAATATAAAGAACAT
TGGAAACTCAAGTGCATTCAACAAGCTTGGTACGTGAACTTTGGAGATCACAAACAATATCGTTTCTTTTTAGAGAAAGATGATGTTTGTCCAGGAGATGAGCACGTATA
TGAGGTCATTGTCTCCGCAAAAAAATATGGTTTTATAACAATCAAGGATCTCATACTTTTCATGCGATACTTCAAATTCTGATCCCAACTTCCTTCCCTCTTCTATTCTT
CTACTATATATCTACTTCACTATATATATATATATATATGGCACTGTACCAACCTTGATTATCAATATCTAAATAATGGAATAATAAGTGATACTATTTAAGTAATCATT
CTCTCTCTTTTTTTAGTTCAATAACATTGTTTGTTTGATGTTGGAGATTTGAACTTCTAACTTCTCCGTCGAATGTACTGCTTGATTAAGTTCTTTTTGGTTTCTCTCTC
TTCAAACTATACGTTGATGAAGTTTTTATATTTCTATCCGGAC
Protein sequenceShow/hide protein sequence
MSCATIGNNVGQQEEERNDMKKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNFGDHKQYRFFLEKDDVCPGDEHVYEVIVSAKKYGFITIK
DLILFMRYFKF