; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018154 (gene) of Snake gourd v1 genome

Gene IDTan0018154
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationLG02:29731042..29731611
RNA-Seq ExpressionTan0018154
SyntenyTan0018154
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]2.6e-3650Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+ +SKS A++++Y GPITRS S+ +   + Q S IA  IL+++ +S +A + I EN ++      S +  + + PDVMS+MM D  + E  M E +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        +KIN+L+K V+ERD+EIA+LK Q+++R+ AES +TP+V+  +KGK  VQE+   Q STS+ASLS QQL+DMITNSIRAQYG P+Q S MYSK
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.0e-3549.48Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+ +SKS A++++Y GPITRS S+ +   + Q S IA  IL+++ +S +A + I EN ++      S +  + + PDVMS+MM D  + E  M E +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        +KIN+L+K V+ERD+EIA+LK Q+++R+ AES +TP+V+  +KGK  VQE+   Q STS+ASLS QQL+DMIT+SIRAQYG P+Q S MYSK
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.0e-3549.48Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+ +SKS A++++Y GPITRS S+ +   + Q S IA  IL+++ +S +A + I EN ++      S +  + + PDVMS+MM D  + E  M E +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        +KIN+L+K V+ERD+EIA+LK Q+++R+ AES +TP+V+  +KGK  VQE+   Q STS+ASLS QQL+DMIT+SIRAQYG P+Q S MYSK
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.0e-3549.48Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+ +SKS A++++Y GPITRS S+ +   + Q S IA  IL+++ +S +A + I EN ++      S +  + + PDVMS+MM D  + E  M E +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        +KIN+L+K V+ERD+EIA+LK Q+++R+ AES +TP+V+  +KGK  VQE+   Q STS+ASLS QQL+DMIT+SIRAQYG P+Q S MYSK
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]2.6e-3650Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+ +SKS A++++Y GPITRS S+ +   + Q S IA  IL+++ +S +A + I EN ++      S +  + + PDVMS+MM D  + E  M E +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        +KIN+L+K V+ERD+EIA+LK Q+++R+ AES +TP+V+  +KGK  VQE+   Q STS+ASLS QQL+DMITNSIRAQYG P+Q S MYSK
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

TrEMBL top hitse value%identityAlignment
A0A5A7TC87 Ty3-gypsy retrotransposon protein2.5e-3248.44Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+V+SKS A+++SY+G +T+SH ++   E+ Q  V+  K L ++ +S +  + I +N +F   T  S    + S  +V+S+MM D   +E  MVE +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        KKIN L+K VEERD+EIA+LK+Q+++ + AES KTP+V+  +KGK  VQE+   Q S S+ASLS QQL+DMI NSIRAQYG P+Q S MYSK
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

A0A5A7TFN2 Ty3-gypsy retrotransposon protein1.9e-3245.83Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+ +S S  ++++Y GPITRS S+ +  E+ Q S +A +IL+++ +S +A + I EN ++      S +  + + PDV S+MM D  ++E  M E +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        +KIN L+KAVEERD+EI + + QI +R+ AES +TP+V+  +KGK  +QE+   Q S S+ASLS QQL+DMI NSI+AQYG P Q + MYSK
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

A0A5A7UF60 Ty3-gypsy retrotransposon protein5.6e-3246.35Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+V+S S  ++++Y GPITRS S+ +  E+ Q S +   IL+++ +S +A + I +N ++      S    + + PDVMS+MM D  + E  M E +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        KKIN L+KAVEERD+EI +L+ Q+ +R+ AES +TP+V+  +KGK  VQE+   Q S S+ASLS QQL+DMI NSIRAQYG   Q + MY K
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

A0A5D3BY54 Ty3-gypsy retrotransposon protein3.5e-3448.44Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+ +S S  ++N+Y GPITRS S+ +  E+ Q S +A  IL+++ +S++A + I EN ++      S +  + + PDVMS+MM D    E  M E +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        +KIN L+KAVEERD+EI +L+ Q+ +R+ AES +TPIV+  +KGK  VQE+   Q S S+ASLS QQL+DMI NSIRAQYG P Q + MYSK
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

A0A5D3DIN4 Ty3-gypsy retrotransposon protein2.5e-3248.44Show/hide
Query:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK
        M SK+V+SKS A+++SY+G +T+SH ++   E+ Q  V+  K L ++ +S +  + I +N +F   T  S    + S  +V+S+MM D   +E  MVE +
Subjt:  MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFK

Query:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK
        KKIN L+K VEERD+EIA+LK+Q+++ + AES KTP+V+  +KGK  VQE+   Q S S+ASLS QQL+DMI NSIRAQYG P+Q S MYSK
Subjt:  KKINMLLKAVEERDYEIASLKNQIESRDAAESRKTPIVR--NKGKTSVQEDH-TQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCCAAAGAAGTTTCTTCAAAGTCTGTCGCTTCAAATAACTCCTACATGGGGCCAATCACGCGCAGTCACTCTAGAAAAGTCCAACCTGAAGAAAGTCAAACATC
TGTCATCGCAAACAAAATACTTAGACGAATGACAAAATCTGTTCAAGCTGATGTCACCATCGCAGAAAACCTCGTGTTTGGAAAAATCACTTTTCCTTCTCTTCAACCGA
GCGAAACATCAAGCCCTGATGTGATGTCCATTATGATGAATGATGCAGGCATTAGTGAGGAAAGAATGGTTGAATTTAAAAAGAAGATCAACATGTTATTGAAGGCAGTT
GAAGAAAGAGATTATGAAATCGCTTCTCTTAAGAATCAGATTGAAAGTCGAGATGCTGCTGAATCAAGAAAAACCCCTATTGTCAGAAATAAGGGAAAGACCTCTGTACA
AGAAGATCATACACAACATTCCACTTCAATTGCTTCATTATCTTCCCAACAACTCAAGGATATGATTACAAACTCCATCAGAGCACAATATGGTTGGCCTACTCAAAATT
CTCTTATGTATTCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCCAAAGAAGTTTCTTCAAAGTCTGTCGCTTCAAATAACTCCTACATGGGGCCAATCACGCGCAGTCACTCTAGAAAAGTCCAACCTGAAGAAAGTCAAACATC
TGTCATCGCAAACAAAATACTTAGACGAATGACAAAATCTGTTCAAGCTGATGTCACCATCGCAGAAAACCTCGTGTTTGGAAAAATCACTTTTCCTTCTCTTCAACCGA
GCGAAACATCAAGCCCTGATGTGATGTCCATTATGATGAATGATGCAGGCATTAGTGAGGAAAGAATGGTTGAATTTAAAAAGAAGATCAACATGTTATTGAAGGCAGTT
GAAGAAAGAGATTATGAAATCGCTTCTCTTAAGAATCAGATTGAAAGTCGAGATGCTGCTGAATCAAGAAAAACCCCTATTGTCAGAAATAAGGGAAAGACCTCTGTACA
AGAAGATCATACACAACATTCCACTTCAATTGCTTCATTATCTTCCCAACAACTCAAGGATATGATTACAAACTCCATCAGAGCACAATATGGTTGGCCTACTCAAAATT
CTCTTATGTATTCCAAGTAA
Protein sequenceShow/hide protein sequence
MTSKEVSSKSVASNNSYMGPITRSHSRKVQPEESQTSVIANKILRRMTKSVQADVTIAENLVFGKITFPSLQPSETSSPDVMSIMMNDAGISEERMVEFKKKINMLLKAV
EERDYEIASLKNQIESRDAAESRKTPIVRNKGKTSVQEDHTQHSTSIASLSSQQLKDMITNSIRAQYGWPTQNSLMYSK