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Tan0018181 (gene) of Snake gourd v1 genome

Gene IDTan0018181
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG05:65449344..65449610
RNA-Seq ExpressionTan0018181
SyntenyTan0018181
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.5e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
A0A5A7TU93 Gag/pol protein1.5e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
A0A5A7TWB9 Gag/pol protein1.5e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
A0A5A7V4M1 Gag/pol protein1.5e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
A0A5D3CPJ6 Gag/pol protein1.5e-2773.56Show/hide
Query:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+NG VIDE SQVSFI+ESLP+SFLQF +N +
Subjt:  MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNII
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGACCATGTTTGGACAACCGTCCTCGTCGGTCCGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGGAACATCCGTTAGGGAGCATGTCCTTAATATGATGGTCCACTTCAACGTGGCAGAGGTAAACGGGGTTGTCATAGATGAGAACAGTCAGGTCAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTGCAGTTCTGCACCAATATAATTCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGACCATGTTTGGACAACCGTCCTCGTCGGTCCGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGGAACATCCGTTAGGGAGCATGTCCTTAATATGATGGTCCACTTCAACGTGGCAGAGGTAAACGGGGTTGTCATAGATGAGAACAGTCAGGTCAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTGCAGTTCTGCACCAATATAATTCGGTGA
Protein sequenceShow/hide protein sequence
MITAKEIMGSLQTMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNGVVIDENSQVSFIMESLPKSFLQFCTNIIR