; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018221 (gene) of Snake gourd v1 genome

Gene IDTan0018221
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncalmodulin-like
Genome locationLG01:16370109..16370381
RNA-Seq ExpressionTan0018221
SyntenyTan0018221
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]6.1e-3180.68Show/hide
Query:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYT
        M+RKSK  Q RPK+SR+QLS+IF+NHD DGDGRLS T+LT AF YIGA LPSYRA HALLHTDSD DGFI EKDFELLVNYAEKRKYT
Subjt:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYT

KAG6600743.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3278.89Show/hide
Query:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI
        M RK+K   QRPKISRQQL +IF+NHDRDGDGRLS+ +LT+AFHYIGALLPS+RACHALL+TDSDRDGFI EKDFE L++YAEKR+YTVI
Subjt:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI

KAG6600744.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3074.44Show/hide
Query:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI
        M RK+K    RP+ISR+QL LIF+NHD +GDGRLS+ +LT+AFHYIGALLPS+RACHALL+TDSDRDGFI EKDFE L++YAEKR+YTVI
Subjt:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3075.56Show/hide
Query:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI
        M+RK+K  Q RPK+SR+QLS+IF+NHD DGDGRLSAT+LTEAF YIGA LPSYRA HAL +TDSDRDGFI EKDFE LVNY EKR YT++
Subjt:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-3281.11Show/hide
Query:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI
        M+RKSK  Q RPK+SR+QLS+IF+NHD DGDGRLS T+LT AF YIGA LPSYRA HALLHTDSD DGFI EKDFELLVNYAEKRKYTVI
Subjt:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein1.8e-2874.44Show/hide
Query:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI
        MSRKSK    R K+SR+QL LIF+NHD D DGRLS T+LTEAF YIGA LP+YRA HALLH DSDRDGFI EKDFE LVNYAE+R+YT+I
Subjt:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI

A0A5A7VDB9 Putative calcium-binding protein CML274.0e-2873.33Show/hide
Query:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI
        MSR+SK    R ++SR+QL LIF+NHD D DGRLS T+LTEAF YIGA LP YRA HAL H DSDRDGFI EKDFELLVNYAE+R+YTVI
Subjt:  MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI

A0A5N6RQV2 Uncharacterized protein4.0e-1250.67Show/hide
Query:  SRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTV
        +R QL  IF++HD DGDG+LS  ++  AF Y+G+   SYRA  ALLH DSD DG++ E++ + LV+YA K  YT+
Subjt:  SRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTV

A0A6J1KUW2 calmodulin-like6.8e-1248.61Show/hide
Query:  KISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEK
        K+SR Q+  IF  HD DGDG LS ++LT+AF + G+++P Y+A + L + D+D DG I E++ E LV+YAE+
Subjt:  KISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEK

A5AWP8 Uncharacterized protein1.8e-1250Show/hide
Query:  ISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTV
        +  QQL  IFK HD +GDG+L+  +L +AF ++GAL+P +RA  AL H D+D DG I EK+ + LV YA K  YT+
Subjt:  ISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTV

SwissProt top hitse value%identityAlignment
O81701 Polcalcin Aln g 45.0e-0438.89Show/hide
Query:  IFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF
        IFK  D +GDG++SA++L +A   +G++ P     H +   D+D DGFI  ++F
Subjt:  IFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF

Q0DJV6 Probable calcium-binding protein CML186.6e-0434.48Show/hide
Query:  QLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF
        +L  +F+ +D +GDG++SA +L      +GA L        +   DSDRDGF+   +F
Subjt:  QLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF

Q39419 Polcalcin Bet v 41.0e-0440.74Show/hide
Query:  IFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF
        IFK  D +GDG++SA +L EA   +G++ P     H +   D+D DGFI  ++F
Subjt:  IFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF

Q8L3R2 Probable calcium-binding protein CML415.0e-0434.43Show/hide
Query:  SRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF
        S+++L  +F + D DGDG++SA +L   F  +G  +    A  A+   D+D DG +  +DF
Subjt:  SRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF

Q8RYK0 Probable calcium-binding protein CML316.6e-0436.92Show/hide
Query:  SLIFKNHDRDGDGRLSATDLTEAFH-YIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAE
        S +F   D DGDGR+SA +L       +G  +    A   +   D+D DG +CE +F  LV  AE
Subjt:  SLIFKNHDRDGDGRLSATDLTEAFH-YIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAE

Arabidopsis top hitse value%identityAlignment
AT3G50770.1 calmodulin-like 413.6e-0534.43Show/hide
Query:  SRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF
        S+++L  +F + D DGDG++SA +L   F  +G  +    A  A+   D+D DG +  +DF
Subjt:  SRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF

AT3G51920.1 calmodulin 93.9e-0432.26Show/hide
Query:  QLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLV
        +L  +F+  DRDGDG +S  +L E    +G  + +  A H +   D D DGF+   +F  ++
Subjt:  QLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLV

AT4G03290.1 EF hand calcium-binding protein family3.9e-0427.59Show/hide
Query:  QLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF
        +L+ +F+  D+DGDG+++  +L E+F  +G ++P       +   D + DG +  ++F
Subjt:  QLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGCAAAAGCAAAAGGGAACAGCAGAGGCCTAAGATATCAAGACAGCAACTAAGTTTAATCTTCAAAAACCATGACCGCGACGGCGACGGCCGCCTCAGCGCCAC
CGACCTTACTGAAGCCTTCCACTATATCGGCGCCCTTCTGCCGTCTTACCGAGCTTGCCACGCTCTTCTTCACACCGATTCCGATCGAGATGGATTCATCTGCGAGAAGG
ATTTCGAATTGCTCGTCAATTATGCCGAGAAACGCAAATACACAGTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCGCAAAAGCAAAAGGGAACAGCAGAGGCCTAAGATATCAAGACAGCAACTAAGTTTAATCTTCAAAAACCATGACCGCGACGGCGACGGCCGCCTCAGCGCCAC
CGACCTTACTGAAGCCTTCCACTATATCGGCGCCCTTCTGCCGTCTTACCGAGCTTGCCACGCTCTTCTTCACACCGATTCCGATCGAGATGGATTCATCTGCGAGAAGG
ATTTCGAATTGCTCGTCAATTATGCCGAGAAACGCAAATACACAGTCATTTGA
Protein sequenceShow/hide protein sequence
MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI