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Tan0018227 (gene) of Snake gourd v1 genome

Gene IDTan0018227
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S acidic ribosomal protein P1-like
Genome locationLG01:647781..649366
RNA-Seq ExpressionTan0018227
SyntenyTan0018227
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574265.1 60S acidic ribosomal protein P1-1, partial [Cucurbita argyrosperma subsp. sororia]4.5e-4493.69Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MSTSELACAYAALAL+DDGIAITAD IAAVVAAAGLCVESYWPSL AKLAEKRDIGDLLLNVGCGGG AA VSVAAPAGG AAS+AAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022140845.1 60S acidic ribosomal protein P1-like [Momordica charantia]1.1e-4592.79Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MSTSELACAYAA+ALYDDGIAITA+ IAAVVAAAGLCVESYWPSL AKLAEKR+IGDLLLNVGCGGG AAPVSVAAPAGG AAS+AAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022922611.1 60S acidic ribosomal protein P1 [Cucurbita moschata]1.6e-4491.89Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MS+SELACAYAALALYDDGIAITAD IAAVVAAAGLCVESYWPSL AKLAEKRDIGDLLLNVGCGGG AAPVSVAA A G +AS+AAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022984373.1 60S acidic ribosomal protein P1 [Cucurbita maxima]5.3e-4592.79Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MS SELACAYAALALYDDGIAITAD IAAVVAAAGLCVESYWPSL AKLAEKRDIGDLLLNVGCGGG AAPVSVAA AGG +AS+AAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_023551718.1 60S acidic ribosomal protein P1 [Cucurbita pepo subsp. pepo]3.1e-4592.79Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MS+SELACAYAALALYDDGIAITAD IAAVVAAAGLCVESYWPSL AKLAEKRDIGDLLLNVGCGGG AAPVSVAA AGG +AS+AAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A6J1CGB2 60S acidic ribosomal protein P1-like5.2e-4692.79Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MSTSELACAYAA+ALYDDGIAITA+ IAAVVAAAGLCVESYWPSL AKLAEKR+IGDLLLNVGCGGG AAPVSVAAPAGG AAS+AAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1E4K8 60S acidic ribosomal protein P17.5e-4591.89Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MS+SELACAYAALALYDDGIAITAD IAAVVAAAGLCVESYWPSL AKLAEKRDIGDLLLNVGCGGG AAPVSVAA A G +AS+AAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1G2H4 60S acidic ribosomal protein P1-like2.2e-4493.69Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MSTSELACAYAALAL+DDGIAITAD IAAVVAAAGLCVESYWPSL AKLAEKRDIGDLLLNVGCGGG AA VSVAAPAGG AAS+AAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1HYH2 60S acidic ribosomal protein P1-like1.8e-4391.89Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MSTSEL CAYAALAL+DDGIAITAD IAAVVAAAGLCVESYWPSL AKLAEKRDIGDLLLNVGCGGG AA VSVAAPAGG AAS+AAPAVEEK+EEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1JAB2 60S acidic ribosomal protein P12.6e-4592.79Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MS SELACAYAALALYDDGIAITAD IAAVVAAAGLCVESYWPSL AKLAEKRDIGDLLLNVGCGGG AAPVSVAA AGG +AS+AAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-21.2e-2863.72Show/hide
Query:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGC-GGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPK
        MST  ELAC+YA + L D+GIAIT+D IA +V AAG+ +ESYWP L AK+AEKR++ DL++NVG  GGG  APVS AAPA    A++AAPA EEKK+EP 
Subjt:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGC-GGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

P29763 60S acidic ribosomal protein P17.5e-2662.16Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        MSTSELAC YAAL L+DDG+ ITADNI  +  AAG+ VE YWP+L AKL  K+ + DL+ NVG GGG AAP + A  AGG  A+ AAP  EEKKE  +EE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
           DMGFSLFD
Subjt:  SDDDMGFSLFD

P52855 60S acidic ribosomal protein P14.9e-3372.97Show/hide
Query:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE
        M++ ELAC YAAL L DDGIAITA+ IA +V AA + VESYWP+L AKL EKR++ DL+L+VG GGG AAPV+ AAPAGG AA++AAPAVEEKKEE KEE
Subjt:  MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-14.3e-2962.5Show/hide
Query:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKE
        MST  ELAC+YA + L D+GIAITAD IA +V AAG+ +ESYWP L AK+AEKR++ DL++NVG GGG  APV+ AAPA G  A++A  A E+KK+EP E
Subjt:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-36.6e-3064.6Show/hide
Query:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEE-KKEEPK
        MST  ELAC+YA + L D+GIAITAD IA +V AAG+ +ESYWP L AK+AEKR++ DL++NVG GGG  APV+ AAPA G  A++AAPA EE KK+EP 
Subjt:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family3.0e-3062.5Show/hide
Query:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKE
        MST  ELAC+YA + L D+GIAITAD IA +V AAG+ +ESYWP L AK+AEKR++ DL++NVG GGG  APV+ AAPA G  A++A  A E+KK+EP E
Subjt:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.2 60S acidic ribosomal protein family3.0e-3062.5Show/hide
Query:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKE
        MST  ELAC+YA + L D+GIAITAD IA +V AAG+ +ESYWP L AK+AEKR++ DL++NVG GGG  APV+ AAPA G  A++A  A E+KK+EP E
Subjt:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.4 60S acidic ribosomal protein family3.0e-3062.5Show/hide
Query:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKE
        MST  ELAC+YA + L D+GIAITAD IA +V AAG+ +ESYWP L AK+AEKR++ DL++NVG GGG  APV+ AAPA G  A++A  A E+KK+EP E
Subjt:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family4.7e-3164.6Show/hide
Query:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEE-KKEEPK
        MST  ELAC+YA + L D+GIAITAD IA +V AAG+ +ESYWP L AK+AEKR++ DL++NVG GGG  APV+ AAPA G  A++AAPA EE KK+EP 
Subjt:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family4.7e-3164.6Show/hide
Query:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEE-KKEEPK
        MST  ELAC+YA + L D+GIAITAD IA +V AAG+ +ESYWP L AK+AEKR++ DL++NVG GGG  APV+ AAPA G  A++AAPA EE KK+EP 
Subjt:  MST-SELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACCAGTGAGCTTGCCTGCGCCTACGCCGCCCTGGCTCTTTACGACGATGGAATTGCAATCACCGCGGATAACATTGCAGCCGTAGTAGCAGCTGCAGGGCTCTG
TGTGGAATCCTACTGGCCCAGCCTGCTTGCGAAGTTGGCGGAGAAGAGGGATATCGGGGACCTTCTTCTGAACGTTGGCTGTGGTGGTGGCGTTGCGGCTCCCGTGTCTG
TAGCTGCTCCTGCCGGTGGTGTTGCTGCCTCTTCTGCCGCTCCTGCCGTCGAGGAAAAGAAGGAGGAGCCAAAGGAAGAGAGCGATGACGACATGGGATTCAGCTTATTC
GATTAG
mRNA sequenceShow/hide mRNA sequence
CCACTGAAGCCCAAGTCAGACGAACCCGGTCCGAGCATGAAAAACCCTAATTCCCCTTCGCAGTTCGCACGACGCGCAATATATAGCATCCTGAGAACTGTGACGATCGC
CGTACCCGCATTTGGCTCCTCCAAGTAGTCTCCCCGCCCGGCGCTACGCTAACCATGTCTACCAGTGAGCTTGCCTGCGCCTACGCCGCCCTGGCTCTTTACGACGATGG
AATTGCAATCACCGCGGATAACATTGCAGCCGTAGTAGCAGCTGCAGGGCTCTGTGTGGAATCCTACTGGCCCAGCCTGCTTGCGAAGTTGGCGGAGAAGAGGGATATCG
GGGACCTTCTTCTGAACGTTGGCTGTGGTGGTGGCGTTGCGGCTCCCGTGTCTGTAGCTGCTCCTGCCGGTGGTGTTGCTGCCTCTTCTGCCGCTCCTGCCGTCGAGGAA
AAGAAGGAGGAGCCAAAGGAAGAGAGCGATGACGACATGGGATTCAGCTTATTCGATTAGGAGGCTCGTTTGTTTATTGGTTTGTATTAGGAATTTTTTGGGTGTTAGCC
TCATTGGATTTATCTTTATTTGTCTCGAGCGTTTTTTTACTAGGGAGTTTCTAGTTCTATTTTGCCTTTAATTTACAATGCAAAATGTCAATCATTTTCTATACTTTTGT
AACAATTTAGTTTCTCACCTTTAATATTTAACAATTTAGTCTTTATATTTTAAAATTTGTAATAATTTAGTTTTCATCACAAAAAATATTGCTAAAATTTAAC
Protein sequenceShow/hide protein sequence
MSTSELACAYAALALYDDGIAITADNIAAVVAAAGLCVESYWPSLLAKLAEKRDIGDLLLNVGCGGGVAAPVSVAAPAGGVAASSAAPAVEEKKEEPKEESDDDMGFSLF
D