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Tan0018258 (gene) of Snake gourd v1 genome

Gene IDTan0018258
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationLG11:1348897..1349109
RNA-Seq ExpressionTan0018258
SyntenyTan0018258
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005635 - nuclear envelope (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578365.1 hypothetical protein SDJN03_22813, partial [Cucurbita argyrosperma subsp. sororia]9.8e-2997.14Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

XP_022134304.1 uncharacterized protein LOC111006599 [Momordica charantia]7.5e-2998.57Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLFVLLTPGLLVQMPGK+RFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

XP_022939120.1 uncharacterized protein LOC111445120 [Cucurbita moschata]9.8e-2997.14Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

XP_022993368.1 uncharacterized protein LOC111489412 [Cucurbita maxima]9.8e-2997.14Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

XP_023551540.1 uncharacterized protein LOC111809330 [Cucurbita pepo subsp. pepo]9.8e-2997.14Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

TrEMBL top hitse value%identityAlignment
A0A540LU73 Uncharacterized protein2.6e-2787.14Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        M+DWGPVF+AVVLF+LLTPGLL+QMPGK+RFVEFGNFQTSGVSILVHSI+YFALICIFLLA+GVH+Y+GS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

A0A5D3BUE1 Uncharacterized protein6.9e-2895.71Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAV+LFVLLTPGLLVQMPGK+RFVEFGNFQTSGVSILVHSILYFALICIFLLAV VHVYMGS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

A0A6J1BYE9 uncharacterized protein LOC1110065993.6e-2998.57Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLFVLLTPGLLVQMPGK+RFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

A0A6J1FLS0 uncharacterized protein LOC1114451204.8e-2997.14Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

A0A6J1K207 uncharacterized protein LOC1114894124.8e-2997.14Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPVFVAVVLFVLLTPGLLVQMPGKNRF+EFGNFQTSGVSILVHS LYFALICIFLLAVGVHVYMGS
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein1.9e-2268.18Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHV
        M DWGPVFVAV LFVLLTPGLL+Q+PG+ R VEFG FQTSG+S++VH+++YF L+CI LLA+ +H+
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHV

AT3G48660.1 Protein of unknown function (DUF 3339)9.5e-2267.14Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS
        MADWGPV VAV+LFVLLTPGLL Q+P + R VEFGN QTSG SILVH+I++F LI IF +A+ +H+Y G+
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS

AT5G08391.1 Protein of unknown function (DUF 3339)1.6e-2466.67Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMG
        M+DWGPV V V+LFV+LTPGLL Q+PG+ ++VEFGNFQTS VS++VHS+LYF+L+C+FLLA+ +H+Y+G
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMG

AT5G40980.1 Protein of unknown function (DUF 3339)1.7e-1857.58Show/hide
Query:  ADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVY
        ADWGPV VAV LF+LL+PGLL Q+P + R +EFGN  TSG+SILVH+I+YF ++ I ++A+ +H++
Subjt:  ADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVY

AT5G63500.1 Protein of unknown function (DUF 3339)8.0e-2165.22Show/hide
Query:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMG
        MADWGPV +AV+LFV+L+PGLL Q+P   R VEFGN QTSG SILVH+I++F LI IF +A+ VH+Y G
Subjt:  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGGGACCAGTGTTCGTGGCGGTGGTGCTCTTCGTTCTTCTAACCCCTGGATTGCTCGTTCAGATGCCCGGCAAGAACCGATTCGTCGAATTTGGGAATTT
TCAGACCAGTGGAGTTTCCATTCTGGTTCATTCCATTCTCTATTTTGCCCTAATCTGCATCTTCTTGTTGGCCGTTGGTGTTCATGTCTATATGGGCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTGGGGACCAGTGTTCGTGGCGGTGGTGCTCTTCGTTCTTCTAACCCCTGGATTGCTCGTTCAGATGCCCGGCAAGAACCGATTCGTCGAATTTGGGAATTT
TCAGACCAGTGGAGTTTCCATTCTGGTTCATTCCATTCTCTATTTTGCCCTAATCTGCATCTTCTTGTTGGCCGTTGGTGTTCATGTCTATATGGGCTCCTAA
Protein sequenceShow/hide protein sequence
MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFVEFGNFQTSGVSILVHSILYFALICIFLLAVGVHVYMGS