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Tan0018269 (gene) of Snake gourd v1 genome

Gene IDTan0018269
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:15661797..15666079
RNA-Seq ExpressionTan0018269
SyntenyTan0018269
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650189.1 hypothetical protein Csa_011006, partial [Cucumis sativus]1.6e-3585.58Show/hide
Query:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N S R SDF++FSASLSLLFVSALSDDSS KDS  SGNHPS+ S+TGSMVAIILLG+LV+V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

KAG7015450.1 hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-3586.54Show/hide
Query:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N SRRSSD VA SASLSLLFVSALS+DSS KDSI SG H S+SS TGSMVAIILLG LV+V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

KAG7031355.1 hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3789.42Show/hide
Query:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N SRRSSDF++FSA LSLLFVSALSDDS+PKDSIKSGNHPS+ SNT SM+AIILLGLLV VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

XP_016901207.1 PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo]8.5e-3787.5Show/hide
Query:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N S R SDF++FSASLSLLFVSALSDDSS KDSI SGNHPS+ SNTGSMVAIILLG+LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

XP_022929545.1 uncharacterized protein LOC111436082 [Cucurbita moschata]4.7e-3586.54Show/hide
Query:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N SRRSSD VA SASLSLLFVSALS+DSS KDSI SG H S+SS TGSMVAIILLG LV+V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

TrEMBL top hitse value%identityAlignment
A0A0A0L5F0 Uncharacterized protein7.8e-3685.58Show/hide
Query:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N S R SDF++FSASLSLLFVSALSDDSS KDS  SGNHPS+ S+TGSMVAIILLG+LV+V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A1S4DZ07 uncharacterized protein LOC1034933154.1e-3787.5Show/hide
Query:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N S R SDF++FSASLSLLFVSALSDDSS KDSI SGNHPS+ SNTGSMVAIILLG+LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A5A7V4C4 Uncharacterized protein3.9e-2777.08Show/hide
Query:  SSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        + +F + S S        LSDDSS KDSI SGNHPS+ SNTGSMVAIILLG+LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  SSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A6J1EUP1 uncharacterized protein LOC1114360822.3e-3586.54Show/hide
Query:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N SRRSSD VA SASLSLLFVSALS+DSS KDSI SG H S+SS TGSMVAIILLG LV+V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A6J1J6C2 uncharacterized protein LOC1114829872.3e-3586.54Show/hide
Query:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N SRRSSD VA SASLSLLFVSALS+DSS KDSI SG H S+SS TGSMVAIILLG LV+V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein1.3e-1959.34Show/hide
Query:  FSASLSLLFVSALSDDSSPKDS-IKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        F AS+ L F   LS DS   ++ +K+ +H S SS TG+ V ++L+G + + + SFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FSASLSLLFVSALSDDSSPKDS-IKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.1 unknown protein5.5e-1857.95Show/hide
Query:  ASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        AS+ L F   +S D +   +       ++SS TG+ V  ILLG   +  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  ASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.2 unknown protein2.1e-1757.14Show/hide
Query:  LSLLFVSAL-----SDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L++L++ ++      D +S     K+ +H S SS TG+ V  ILLG   +  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  LSLLFVSAL-----SDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT3G53490.1 unknown protein4.9e-0639.47Show/hide
Query:  DDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +  + K+  K G HP      G +V I++L L V+ V     +K W+KK+R+++ AR LKLFE+ D++E ELGL +
Subjt:  DDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGAAATTTTAGTCGCAGATCGTCTGATTTCGTTGCGTTTTCGGCTTCGCTTTCTCTACTTTTCGTCTCCGCCCTTTCTGATGATTCCAGTCCCAAAGATAGTAT
TAAATCTGGGAATCATCCATCCGCCAGCAGCAACACTGGCTCGATGGTTGCAATTATCCTCCTTGGACTTTTGGTAATGGTGGTGTTGTCATTTTTCCTTTTCAAGTTAT
GGCAAAAAAAGAGAAGAGAGGAGCAGTATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTTGAGGTTGAGCTTGGTCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
AATTTAGCAGGGCTTTCAAAATATTCCATAATACAAAATCAATTTACTTCACGAAATATATTCGTAAAATTTGAGGGAAGGATAATCATGCATCTTGAATCTTGATTCTT
GAGGCAACTTCTAAACGTGTAGCGTGGTTCTGCAACTTTCAGTTTCAGCTTTCCCTTCAACTTCCATTTCTCTGCTGCGAGCGATCGAACGACAGAATTTGTTTTCAGAG
CTTGCGAGAAACAGATAAACACAGAGATGAGCGGAAATTTTAGTCGCAGATCGTCTGATTTCGTTGCGTTTTCGGCTTCGCTTTCTCTACTTTTCGTCTCCGCCCTTTCT
GATGATTCCAGTCCCAAAGATAGTATTAAATCTGGGAATCATCCATCCGCCAGCAGCAACACTGGCTCGATGGTTGCAATTATCCTCCTTGGACTTTTGGTAATGGTGGT
GTTGTCATTTTTCCTTTTCAAGTTATGGCAAAAAAAGAGAAGAGAGGAGCAGTATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTTGAGGTTGAGCTTGGTC
TTCGGGATTGAAGAATATCTGAAATTCTACTTCACCGAAGTTGGGCTTAGAAACCATTATGTTGGAATTATTGCTTGTCAAATGTCTAAAGATCGTAAGGTGATAGTTTG
CTGTAAGGTTAGATTTTTTTTTTCTCCCTTTGATTTTTTTAACAAATTTGGGGTGGCCATAACCTTGTAATTCTCATATTATAATGAATCATTTTAACAAGTAAGTCGTG
GTTGATGGATTTATGAGTTCAGGTTTGTAAAATTGATGTCATATAGCGAGTTTATTGATGAAAGGGTTTTGATTAAAGCCTTGAATGTTGTTCTTTCATTTAAAGATGCG
TATGGTATTTATAGAGG
Protein sequenceShow/hide protein sequence
MSGNFSRRSSDFVAFSASLSLLFVSALSDDSSPKDSIKSGNHPSASSNTGSMVAIILLGLLVMVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD