; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018270 (gene) of Snake gourd v1 genome

Gene IDTan0018270
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionElf4 domain-containing protein
Genome locationLG08:448283..450213
RNA-Seq ExpressionTan0018270
SyntenyTan0018270
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006381644.1 protein ELF4-LIKE 3 [Populus trichocarpa]3.6e-4485.22Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T S  G+GNG+QIDGK+LQTFQKNFVQVQ+ILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSM+ASSEGDS+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRP
        A++ D K GHKRNRP
Subjt:  AIRPDAKPGHKRNRP

XP_021596442.1 protein ELF4-LIKE 3-like [Manihot esculenta]2.8e-4485.22Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T S  G+GNG+QIDGK+LQTFQKNFVQVQ+ILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLS+SF+KSMEASSEGDS+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRP
        A+R D K GHKRNRP
Subjt:  AIRPDAKPGHKRNRP

XP_021606568.1 protein ELF4-LIKE 3-like [Manihot esculenta]1.3e-4486.09Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T S  G+GNG+QIDGK+LQTFQKNFVQVQ+ILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLS+SFTKSMEASSEGDS+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRP
        A++ DAK GHKRNRP
Subjt:  AIRPDAKPGHKRNRP

XP_022946747.1 protein ELF4-LIKE 3-like [Cucurbita moschata]4.3e-4587.18Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEGETLSSGG+GNG Q+DGKM QTFQKNFVQVQ+ILDQNRLLINEINQNHESKMPDNL+RNVGLIRELNNNIRRVVDLYA LS SFTKSMEASSEG+SA 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRPPP
             AKPGHKRNRPPP
Subjt:  AIRPDAKPGHKRNRPPP

XP_023521403.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo]1.6e-4486.32Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEGETLSSGG+GNG Q+DGKM  TFQKNFVQVQ+ILDQNRLLINEINQNHESKMPDNL+RNVGLIRELNNNIRRVVDLYA LS SFTKSMEASSEG+SA 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRPPP
             AKPGHKRNRPPP
Subjt:  AIRPDAKPGHKRNRPPP

TrEMBL top hitse value%identityAlignment
A0A251JFU2 Elf4 domain-containing protein1.3e-4485.22Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T S  G+GNG+QIDGK+LQTFQKNFVQVQ+ILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLS+SF+KSMEASSEGDS+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRP
        A+R D K GHKRNRP
Subjt:  AIRPDAKPGHKRNRP

A0A2C9W4E0 Elf4 domain-containing protein6.1e-4586.09Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T S  G+GNG+QIDGK+LQTFQKNFVQVQ+ILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLS+SFTKSMEASSEGDS+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRP
        A++ DAK GHKRNRP
Subjt:  AIRPDAKPGHKRNRP

A0A6J1G4K6 protein ELF4-LIKE 3-like2.1e-4587.18Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEGETLSSGG+GNG Q+DGKM QTFQKNFVQVQ+ILDQNRLLINEINQNHESKMPDNL+RNVGLIRELNNNIRRVVDLYA LS SFTKSMEASSEG+SA 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRPPP
             AKPGHKRNRPPP
Subjt:  AIRPDAKPGHKRNRPPP

A0A6J1KJ14 protein ELF4-LIKE 3-like2.1e-4587.18Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEGETLSSGG+GNG Q+DGKM QTFQKNFVQVQ+ILDQNRLLINEINQNHESKMPDNL+RNVGLIRELNNNIRRVVDLYA LS SFTKSMEASSEG+SA 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRPPP
             AKPGHKRNRPPP
Subjt:  AIRPDAKPGHKRNRPPP

B9MSX7 Elf4 domain-containing protein1.8e-4485.22Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T S  G+GNG+QIDGK+LQTFQKNFVQVQ+ILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSM+ASSEGDS+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRP
        A++ D K GHKRNRP
Subjt:  AIRPDAKPGHKRNRP

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 43.3e-1650.63Show/hide
Query:  DGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEG
        D  M +   +NF QVQS+LD+NR LI ++N NH+S+M DN+S+NV LI+ELN NI +VV++Y+DL+TSF+        G
Subjt:  DGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEG

O80877 Protein ELF4-LIKE 14.5e-1344.71Show/hide
Query:  DGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSME----ASSEGDS
        D ++  T    F + Q  LDQNR LI  +N+NH S++PDN+SRNVGLI E+N NI +V+++Y+DLS +F K  +     + +GD+
Subjt:  DGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSME----ASSEGDS

Q570U6 Protein ELF4-LIKE 41.3e-3366.67Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+ LS  G G+   +DGK+LQ+FQK+FV VQ ILDQNRLLINEINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF +S++ASSEG+S+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNR
         ++ D K   KR R
Subjt:  AIRPDAKPGHKRNR

Q8S8F5 Protein ELF4-LIKE 37.9e-3468.7Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T+S   +G+G Q+DGK+LQTF+K+FVQVQ+ILD NRLLINEINQNHESK+PDNL RNVGLIRELNNN+RRV  LY DLS +F+KSMEASSEGDS+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRP
                G++R RP
Subjt:  AIRPDAKPGHKRNRP

Q94BS8 Protein ELF4-LIKE 26.3e-3164.29Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+  S  G G   Q+DGK+LQ FQK+FVQVQ ILDQNRLLINEINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF +S++ASSEG+S  
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKR
         ++ D K  +++
Subjt:  AIRPDAKPGHKR

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 49.6e-3566.67Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+ LS  G G+   +DGK+LQ+FQK+FV VQ ILDQNRLLINEINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF +S++ASSEG+S+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNR
         ++ D K   KR R
Subjt:  AIRPDAKPGHKRNR

AT1G17455.2 ELF4-like 49.6e-3566.67Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+ LS  G G+   +DGK+LQ+FQK+FV VQ ILDQNRLLINEINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF +S++ASSEG+S+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNR
         ++ D K   KR R
Subjt:  AIRPDAKPGHKRNR

AT1G72630.1 ELF4-like 24.5e-3264.29Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+  S  G G   Q+DGK+LQ FQK+FVQVQ ILDQNRLLINEINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF +S++ASSEG+S  
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKR
         ++ D K  +++
Subjt:  AIRPDAKPGHKR

AT2G06255.1 ELF4-like 35.6e-3568.7Show/hide
Query:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T+S   +G+G Q+DGK+LQTF+K+FVQVQ+ILD NRLLINEINQNHESK+PDNL RNVGLIRELNNN+RRV  LY DLS +F+KSMEASSEGDS+ 
Subjt:  MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDAKPGHKRNRP
                G++R RP
Subjt:  AIRPDAKPGHKRNRP

AT2G40080.1 Protein of unknown function (DUF1313)2.4e-1750.63Show/hide
Query:  DGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEG
        D  M +   +NF QVQS+LD+NR LI ++N NH+S+M DN+S+NV LI+ELN NI +VV++Y+DL+TSF+        G
Subjt:  DGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGGAGACATTGTCATCAGGAGGAGTGGGAAATGGAAGCCAAATTGATGGTAAAATGCTGCAGACATTTCAGAAGAATTTCGTTCAAGTTCAGAGCATTTTGGA
CCAAAACAGATTGCTGATCAATGAAATTAACCAAAATCACGAGTCCAAAATGCCCGACAACCTCAGCAGAAATGTTGGTCTGATTCGCGAGCTTAACAACAACATCAGAA
GGGTTGTTGACTTGTACGCTGATCTCTCCACTTCCTTCACCAAATCCATGGAGGCTTCGTCGGAAGGAGACTCCGCCGCCGCCATCAGACCCGACGCCAAGCCTGGCCAC
AAGCGCAACCGCCCTCCGCCGTAG
mRNA sequenceShow/hide mRNA sequence
CCAAGCGTGACTGTCAAATCTATATATTCTATCTCTCCTTTTTAATTTTTAATTTTTTGTTCTCTCTCTTTATCTCTCTCTAGATTTCTCAGAAATTACAGAAGAGGTGT
CTGTTCCGGAGATTCGATTCAATCGGCGATCTTTTTCCACTGCTCCTCGGGAATCAGACTCTTTCTTCCTCAATATAATGTTCCAGATTTTCAAGGGCATAAATTAAAAT
GTATTTGATATGAAGCAGGATTGGGAGTGATTTTGAGAAGAAAATAGTGTTGGGTTAGAGAAAGAAAAAGAAGAGAGGAAAATGGAAGGGGAGACATTGTCATCAGGAGG
AGTGGGAAATGGAAGCCAAATTGATGGTAAAATGCTGCAGACATTTCAGAAGAATTTCGTTCAAGTTCAGAGCATTTTGGACCAAAACAGATTGCTGATCAATGAAATTA
ACCAAAATCACGAGTCCAAAATGCCCGACAACCTCAGCAGAAATGTTGGTCTGATTCGCGAGCTTAACAACAACATCAGAAGGGTTGTTGACTTGTACGCTGATCTCTCC
ACTTCCTTCACCAAATCCATGGAGGCTTCGTCGGAAGGAGACTCCGCCGCCGCCATCAGACCCGACGCCAAGCCTGGCCACAAGCGCAACCGCCCTCCGCCGTAGCCATA
ATTTAATATCCCCCTTCTCTCCCTCTCTTCATTCTTTCCTTAGAACAATAATTTCCCAGATTCTCTGTTTCAGTGTAGCCTCCTTTTGGATCTAATTCATAAACCAAAAT
TAAGCATATATTTTAATTTCATATGGGTGCTTTAGATTTTCTTTTCTTTTTGGTTTCTGGTTCATGTCAGTAAGCTGATCTGTTTTCTTGTTTTTTTTTTCATTCCTCCC
TTTTAAAATTAC
Protein sequenceShow/hide protein sequence
MEGETLSSGGVGNGSQIDGKMLQTFQKNFVQVQSILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAAAIRPDAKPGH
KRNRPPP