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Tan0018271 (gene) of Snake gourd v1 genome

Gene IDTan0018271
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSorting nexin like
Genome locationLG01:16199201..16200966
RNA-Seq ExpressionTan0018271
SyntenyTan0018271
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046869.1 hypothetical protein E6C27_scaffold230G00240 [Cucumis melo var. makuwa]7.0e-3888.51Show/hide
Query:  MAAWTAATRRIVPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDE
        MAAWTAA RRIV SH SVST Q ASL  RRGLAGG DHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAY+FFTKGKK+E
Subjt:  MAAWTAATRRIVPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDE

KAE8650170.1 hypothetical protein Csa_010956 [Cucumis sativus]2.7e-3787.36Show/hide
Query:  MAAWTAATRRIVPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDE
        MAAW AA RRI+ SH S+ST QIASLT RRGLAGGGDHHGPPKVNFWEDPFNPSRWK EHFVIVSLTGWGLVLYGAY+FFTKGKK+E
Subjt:  MAAWTAATRRIVPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDE

KAF3962262.1 hypothetical protein CMV_013205 [Castanea mollissima]1.4e-3069.7Show/hide
Query:  MAAWTAATRRIV-----PSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTK---GKKDEKVGD
        MAAWT A R+ V      S K+ STAQ ASL  RRGLAGGGDHHGPPKVNFW+DP +PS+WK EHFVIVSLTGWGL+ YG Y+FFTK   GKK+EKVG+
Subjt:  MAAWTAATRRIV-----PSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTK---GKKDEKVGD

XP_015896402.1 uncharacterized protein LOC107430112 isoform X2 [Ziziphus jujuba]3.1e-3070.71Show/hide
Query:  MAAWTAATRRI-----VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKD---EKVGD
        MAA T A R+      + S KS STAQ ASL  RRGLAGGGDHHGPPKVNFW+DP NPS+WK EHFVIVSLTGWGL+LYG Y++FTKGKKD   EKVG+
Subjt:  MAAWTAATRRI-----VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKD---EKVGD

XP_023920552.1 uncharacterized protein LOC112032078 [Quercus suber]7.0e-3066.67Show/hide
Query:  MAAWTAATRRIV-----PSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTK---GKKDEKVGDG
        MAAWT A R++V        K+ STAQ ASL  RRGLAGGG HHGPPKVNFW+DP +PS+WK EHFVIVSLTGWGL+ YG Y+FFTK   GKK+EKVG+ 
Subjt:  MAAWTAATRRIV-----PSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTK---GKKDEKVGDG

Query:  AR
        +R
Subjt:  AR

TrEMBL top hitse value%identityAlignment
A0A0A0L362 Uncharacterized protein9.5e-4188.04Show/hide
Query:  MAAWTAATRRIVPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDEKVGDG
        MAAW AA RRI+ SH S+ST QIASLT RRGLAGGGDHHGPPKVNFWEDPFNPSRWK EHFVIVSLTGWGLVLYGAY+FFTKGKK+EKVGDG
Subjt:  MAAWTAATRRIVPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDEKVGDG

A0A5A7U055 Uncharacterized protein3.4e-3888.51Show/hide
Query:  MAAWTAATRRIVPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDE
        MAAWTAA RRIV SH SVST Q ASL  RRGLAGG DHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAY+FFTKGKK+E
Subjt:  MAAWTAATRRIVPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDE

A0A6P4AKA6 uncharacterized protein LOC107430112 isoform X21.5e-3070.71Show/hide
Query:  MAAWTAATRRI-----VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKD---EKVGD
        MAA T A R+      + S KS STAQ ASL  RRGLAGGGDHHGPPKVNFW+DP NPS+WK EHFVIVSLTGWGL+LYG Y++FTKGKKD   EKVG+
Subjt:  MAAWTAATRRI-----VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKD---EKVGD

A0A6P4BBQ1 uncharacterized protein LOC107430112 isoform X19.9e-3070.97Show/hide
Query:  MAAWTAATRRI-----VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDEK
        MAA T A R+      + S KS STAQ ASL  RRGLAGGGDHHGPPKVNFW+DP NPS+WK EHFVIVSLTGWGL+LYG Y++FTKGKKD +
Subjt:  MAAWTAATRRI-----VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDEK

W9R408 Uncharacterized protein7.5e-3069.89Show/hide
Query:  MAAWTAATRRI-----VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDEK
        MAAWTAA R+      + + K  STAQ  SL  RRGLAGGGDHHGPPKVNFWEDP +PSRWK EHFVIVSLTGWGL  YG Y+F T+GKKD+K
Subjt:  MAAWTAATRRI-----VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20820.1 unknown protein1.0e-1852.56Show/hide
Query:  VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDEKV
        +PS +  S A  AS+  RR LAG  DHHG  KV+FW+ P NP  WK EHFV++SL+GWGL+ Y  Y+  T GKK+  V
Subjt:  VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDEKV

AT2G20820.2 unknown protein1.2e-0850.98Show/hide
Query:  VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFV
        +PS +  S A  AS+  RR LAG  DHHG  KV+FW+ P NP  WK EH++
Subjt:  VPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCATGGACGGCGGCAACTCGCCGCATAGTTCCGTCTCACAAGTCAGTTTCTACGGCTCAAATCGCCTCTCTAACCCTTCGGCGCGGTCTGGCCGGCGGTGGCGA
TCATCATGGACCTCCGAAGGTGAACTTTTGGGAGGATCCATTTAATCCATCCAGATGGAAAGGAGAACATTTTGTGATTGTGTCTTTGACTGGATGGGGTTTAGTTCTTT
ATGGGGCCTACGAGTTCTTCACTAAAGGCAAGAAGGACGAGAAAGTTGGAGATGGAGCACGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCATGGACGGCGGCAACTCGCCGCATAGTTCCGTCTCACAAGTCAGTTTCTACGGCTCAAATCGCCTCTCTAACCCTTCGGCGCGGTCTGGCCGGCGGTGGCGA
TCATCATGGACCTCCGAAGGTGAACTTTTGGGAGGATCCATTTAATCCATCCAGATGGAAAGGAGAACATTTTGTGATTGTGTCTTTGACTGGATGGGGTTTAGTTCTTT
ATGGGGCCTACGAGTTCTTCACTAAAGGCAAGAAGGACGAGAAAGTTGGAGATGGAGCACGCTAG
Protein sequenceShow/hide protein sequence
MAAWTAATRRIVPSHKSVSTAQIASLTLRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKDEKVGDGAR