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Tan0018279 (gene) of Snake gourd v1 genome

Gene IDTan0018279
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPeroxiredoxins prx-1 prx-2 prx-3
Genome locationLG08:1482099..1487540
RNA-Seq ExpressionTan0018279
SyntenyTan0018279
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061558.1 hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa]6.5e-3290.24Show/hide
Query:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS
        MASDGS  V+VSTSPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNP ASLSPK SLG+S
Subjt:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS

KAG7030425.1 hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-3291.46Show/hide
Query:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS
        MASDGS SV VSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA++P ASLS KESLG+S
Subjt:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS

KGN60621.1 hypothetical protein Csa_019426 [Cucumis sativus]8.5e-3290.24Show/hide
Query:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS
        MASDGS SV+VSTSPKH NRDAETVRS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMP NNP ASLSPKESL +S
Subjt:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS

TYK10714.1 hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa]1.9e-3189.02Show/hide
Query:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS
        MASDGS  V+VS+SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNP ASLSPK SLG+S
Subjt:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS

XP_022946647.1 uncharacterized protein LOC111450652 [Cucurbita moschata]2.5e-3190.24Show/hide
Query:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS
        MASDGS SV VSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA++P ASLS KESLG+S
Subjt:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS

TrEMBL top hitse value%identityAlignment
A0A0A0LKU3 Uncharacterized protein4.1e-3290.24Show/hide
Query:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS
        MASDGS SV+VSTSPKH NRDAETVRS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMP NNP ASLSPKESL +S
Subjt:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS

A0A2P2LDI8 Peroxiredoxins prx-1 prx-2 prx-32.2e-1768.42Show/hide
Query:  SVAVSTSPKHGNRDAET-VRSSSPKGQCLCSPTMHQGSFRCRLHRS-TSSAWMKRSKSMPANNPGASLSPKESLGT
        S+ +STSPK GN +  T  +SSSP+GQCLCSPT HQGSFRCRLHRS +SSAWM RSKSMP NN   SLSPK +  T
Subjt:  SVAVSTSPKHGNRDAET-VRSSSPKGQCLCSPTMHQGSFRCRLHRS-TSSAWMKRSKSMPANNPGASLSPKESLGT

A0A5A7V1X5 Uncharacterized protein3.2e-3290.24Show/hide
Query:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS
        MASDGS  V+VSTSPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNP ASLSPK SLG+S
Subjt:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS

A0A5D3CHP3 Uncharacterized protein9.2e-3289.02Show/hide
Query:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS
        MASDGS  V+VS+SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNP ASLSPK SLG+S
Subjt:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS

A0A6J1G498 uncharacterized protein LOC1114506521.2e-3190.24Show/hide
Query:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS
        MASDGS SV VSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA++P ASLS KESLG+S
Subjt:  MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein2.8e-0447.62Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN
        ++S  K  C+CSPT H GSF+C+LHR+ S   ++R+KS+  N
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN

AT1G67910.1 unknown protein1.1e-0556.1Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA
        ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA

AT1G67910.2 unknown protein1.1e-0556.1Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA
        ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA

AT3G13227.1 serine-rich protein-related2.3e-0649.09Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN----NPGASLSPK
        +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P+N      G S SPK
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN----NPGASLSPK

AT3G56500.1 serine-rich protein-related1.6e-0461.54Show/hide
Query:  KGQCLCSPTMHQGSFRCRLHRSTSSA
        K  C+C+PT H+GSFRCRLHRS++++
Subjt:  KGQCLCSPTMHQGSFRCRLHRSTSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTGATGGCAGCTTTAGCGTTGCAGTTTCCACATCTCCTAAACATGGCAATAGAGATGCCGAGACCGTGAGGTCCAGTTCGCCGAAAGGTCAGTGTTTGTGCTC
GCCCACGATGCATCAAGGCTCCTTTAGGTGCCGGCTTCATCGTTCAACATCATCAGCATGGATGAAACGATCAAAATCAATGCCTGCCAACAACCCTGGGGCTTCTCTTT
CTCCCAAAGAATCTCTTGGAACTTCCTAA
mRNA sequenceShow/hide mRNA sequence
CGACAAAGGCGCGCGGCAGGTACAGAGGGAGGGAATTCGATTATGGATATGGAATTGCTATTTCGCGCCAAGCCGACGCTCATTGTTAGTCCTGAAATTCTCAGTGTTAG
GGTTCGAACCAGGCTCAAGACTCAAGTGTGATCTCCATTTCCATGGCAGCCGAGGAAGGAAAACTTATTCGTAATCGTCGCAATCATCTCAACTACCCATCTCGCAACTG
GCGTAGACCTGCTGTATTTTCATAGTTTAGAGCTATGGAGTGTCATTACCACCACCACTTTCCATGAGATCCTTCTGAAAAAGACGAGGATGAAGAAAAGAAGAAAGAGG
AACAAGAAGATTGATACTAAAAAGGAAGAGGCTGGCAAGCCTGAGAAGTACAATTGTTGAATGCTGATTTAAGTATCCTCTGTTATATAACCTTTTATCCTGACATGTGT
TGACTGAGAACGACTATATTTTGGTTGATATTTCTGAGTTCCATTTGAAATCTAAAACTCGTTCCATGTGATTCGATTGCAGGCTCTTATTATTTGTGTACTCTGTACAA
AGAACTTTGTCACTGGTGAATATCAAGTACAGAATTGCAGTAGCAGTTTCGTGCCTGTTGGACATGAGGTAGAAACTTTCTCCACTTGATTTGCTGCACATCGTCTGCAG
ATATGGCCTCTGATGGCAGCTTTAGCGTTGCAGTTTCCACATCTCCTAAACATGGCAATAGAGATGCCGAGACCGTGAGGTCCAGTTCGCCGAAAGGTCAGTGTTTGTGC
TCGCCCACGATGCATCAAGGCTCCTTTAGGTGCCGGCTTCATCGTTCAACATCATCAGCATGGATGAAACGATCAAAATCAATGCCTGCCAACAACCCTGGGGCTTCTCT
TTCTCCCAAAGAATCTCTTGGAACTTCCTAA
Protein sequenceShow/hide protein sequence
MASDGSFSVAVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPGASLSPKESLGTS