; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018280 (gene) of Snake gourd v1 genome

Gene IDTan0018280
OrganismTrichosanthes anguina (Snake gourd v1)
Description6,7-dimethyl-8-ribityllumazine synthase
Genome locationLG08:75355244..75356064
RNA-Seq ExpressionTan0018280
SyntenyTan0018280
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022949253.1 uncharacterized protein LOC111452664 [Cucurbita moschata]1.1e-5878.77Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT
        MGNSL HCLGCVLPCGALD IRVVHLNGHVQ FSPPL AGEIL SNPGHVLTTPSSDDH L+RR T+LSP+S LRRG IYFLIPA+SDHRK PK  SS  
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT

Query:  SRDGVFPDSNEDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
        S    FPDSN DV+VLKK K G R RR SR+CGGAWQPHL SISED
Subjt:  SRDGVFPDSNEDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

XP_022964962.1 uncharacterized protein LOC111464913 [Cucurbita moschata]1.8e-6178.95Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT
        MGNSLRHCLGCVLPCGALD IRVVHLNGHVQEFSPP+AA EIL +NPGHVLTTPS D H LVR VTILSPES LRRGGIYFLIPA+SDHRKA K PSS T
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT

Query:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
        S D VFP+ N      EDV+V KKAKPGRR+RRSSRA  GAW+PHL SI+ED
Subjt:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

XP_022970467.1 uncharacterized protein LOC111469438 [Cucurbita maxima]4.8e-6279.61Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT
        MGNSLRHCLGCVLPCGALD IRVVHLNGHVQEFSPP+AA EIL +NPGHVLTTPS D H LVR VTILSPES LRRGGIYFLIPA+SDHRKA KKPSS T
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT

Query:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
        S D VFP+ N      EDV+V KKAKPGRR+RRSSRA  GAW+PHL SI+ED
Subjt:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

XP_023519366.1 uncharacterized protein LOC111782801 [Cucurbita pepo subsp. pepo]1.7e-5979.19Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT
        MGNSLRHCLGCVLPCGALD IRVVHLNGHVQEFSPP+AA EIL +NPGHVLTTPS D H LVR VTILSPES LRRGGIYFLIPA+SDHRKA KKPSS T
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT

Query:  SRDGVFPDSN---EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
        S D V  D     EDV+V K AKPGRR+RRSSRA  GAW+PHL SI+ED
Subjt:  SRDGVFPDSN---EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

XP_038895775.1 uncharacterized protein LOC120083938 [Benincasa hispida]3.5e-6078.29Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT
        MGNSLR+CLGC+LPCGALD IRVVHLNGHVQEFSPPL+A EIL +NPGHVLTTPSSDDHRLVRRVTILSPES LRRGGIYFLIPA+SDHRKA KKPS   
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT

Query:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
           GVFP+S+      EDV+VLKKAKP RR+RR SR+ GG W+PHL SISED
Subjt:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

TrEMBL top hitse value%identityAlignment
A0A0A0LYB2 Uncharacterized protein4.7e-5576.67Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPA-NSD--HRKAP-KKP
        MGNSL+HCLGC+LPCGALD IRVVHLNG VQEFSPPL A +IL++NPGH+LTTPSS DHRLVRRV ILSP+S LRRGGIYFLIPA +SD  HRK P KK 
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPA-NSD--HRKAP-KKP

Query:  SSTTSRDGVFPDSNEDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
        SS  S  GVFP+S EDV+VLKK KP RR+RR SR+ GGAWQPHL SISED
Subjt:  SSTTSRDGVFPDSNEDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

A0A5A7T586 Uncharacterized protein3.5e-5877.27Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPA-NSDHRKAP-KKPSS
        MGNSL+HCLGC+LPCGALD IRVVHLNG VQEFSPPLAA EIL++NPGHVLTTPSSDDHRLVRRV ILSPES LRRGGIYFLIPA +SDHR  P KK SS
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPA-NSDHRKAP-KKPSS

Query:  TTSRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
          S  GVFP+S+      EDV+VLKK KP RR+RR SR+ GGAWQPHL SISED
Subjt:  TTSRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

A0A6J1GBI2 uncharacterized protein LOC1114526645.4e-5978.77Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT
        MGNSL HCLGCVLPCGALD IRVVHLNGHVQ FSPPL AGEIL SNPGHVLTTPSSDDH L+RR T+LSP+S LRRG IYFLIPA+SDHRK PK  SS  
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT

Query:  SRDGVFPDSNEDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
        S    FPDSN DV+VLKK K G R RR SR+CGGAWQPHL SISED
Subjt:  SRDGVFPDSNEDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

A0A6J1HJ26 uncharacterized protein LOC1114649138.9e-6278.95Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT
        MGNSLRHCLGCVLPCGALD IRVVHLNGHVQEFSPP+AA EIL +NPGHVLTTPS D H LVR VTILSPES LRRGGIYFLIPA+SDHRKA K PSS T
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT

Query:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
        S D VFP+ N      EDV+V KKAKPGRR+RRSSRA  GAW+PHL SI+ED
Subjt:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

A0A6J1HZ69 uncharacterized protein LOC1114694382.3e-6279.61Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT
        MGNSLRHCLGCVLPCGALD IRVVHLNGHVQEFSPP+AA EIL +NPGHVLTTPS D H LVR VTILSPES LRRGGIYFLIPA+SDHRKA KKPSS T
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTT

Query:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED
        S D VFP+ N      EDV+V KKAKPGRR+RRSSRA  GAW+PHL SI+ED
Subjt:  SRDGVFPDSN------EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein3.0e-3044.97Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANS------------D
        MGNSLR CL CVLPCGALD IR+VHLNG+V+E +  + AGEIL++NP HVL+ P S    +VR++ ILSPES+L+RG IYFLIP +S             
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANS------------D

Query:  HRKAPKKPSSTTSRDGVFPDS----------NEDVMVLKKAKPGRRERRSSRACG-GAWQPHLQSISED
         +K  + PS+  +   +  D            E V      K  R  RR SR+     W+P L SISED
Subjt:  HRKAPKKPSSTTSRDGVFPDS----------NEDVMVLKKAKPGRRERRSSRACG-GAWQPHLQSISED

AT1G29195.1 unknown protein1.6e-2334.21Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSS--DDHR-----LVRRVTILSPESQLRRGGIYFLIPANS------
        M  ++R C+ C+LPCGALD IR+VH NGHV+E S  + A EI+K++P HVL  PSS   DH         ++ I+ PE++L+RG IYFL+PA        
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSS--DDHR-----LVRRVTILSPESQLRRGGIYFLIPANS------

Query:  -----------------------DHRKAPKKPSSTTSRDGVFPDSNEDVM---------VLKKAKPGRRERRSSRACGGAWQPHLQSISE
                                HR   +K +   S D    +  +D++         +L +    +++RR  R   G W+PHL+SISE
Subjt:  -----------------------DHRKAPKKPSSTTSRDGVFPDSNEDVM---------VLKKAKPGRRERRSSRACGGAWQPHLQSISE

AT1G71015.1 unknown protein4.9e-0432.53Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLI
        MGNSL          G      ++++NG   +   P+ AG ++K  PGHVL   S    RL  R   L P   L    IYF++
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLI

AT2G30230.1 unknown protein1.7e-3345.76Show/hide
Query:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANS-------------
        MGNSLR CL CVLPCGALD IR+VHLNGHV E + P+ AGEIL++NP HVL+ P S    +VR++ ILSPES+L+RG IYFLIP  S             
Subjt:  MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANS-------------

Query:  DHRKAPKKPSSTTSRDGVFPDSN-------------EDVMVLKK----AKPGRRERRSSRACG-GAWQPHLQSISED
          RK P +  +  + D V  + +             EDVM+ +K     K  R  R+ SR+     W+PHL SI+ED
Subjt:  DHRKAPKKPSSTTSRDGVFPDSN-------------EDVMVLKK----AKPGRRERRSSRACG-GAWQPHLQSISED

AT5G66580.1 unknown protein1.7e-0428.18Show/hide
Query:  DFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIP---------ANSDHRKAPKKPSSTTSRDGV-FPD
        D  +++ L+G +QEFS P+   +IL+ NP   +   +SD+      V+ ++   +LR G +YF++P         A      A K  S+ T   GV +  
Subjt:  DFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIP---------ANSDHRKAPKKPSSTTSRDGV-FPD

Query:  SNEDVMVLKK
         ++DV   +K
Subjt:  SNEDVMVLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAATAGTTTAAGGCATTGTTTGGGTTGTGTTCTTCCTTGTGGAGCTTTGGACTTCATCAGAGTGGTTCATCTCAACGGCCATGTCCAAGAATTCTCTCCGCCGCT
CGCCGCCGGTGAGATCCTCAAGTCCAATCCCGGCCACGTCCTCACCACTCCCTCTTCTGACGACCACCGCCTCGTTCGTCGTGTCACCATTCTCTCCCCTGAATCTCAAC
TCCGACGAGGCGGCATCTATTTCTTGATTCCGGCCAATTCCGACCATCGGAAGGCCCCTAAAAAGCCCTCCTCCACCACCTCCCGCGACGGCGTTTTCCCGGACTCCAAC
GAGGATGTCATGGTGTTGAAGAAGGCCAAACCCGGCCGCCGGGAACGCCGGAGCAGCCGCGCGTGCGGCGGCGCGTGGCAGCCTCATCTACAGAGCATTAGTGAAGATTA
A
mRNA sequenceShow/hide mRNA sequence
ATTTTATTCTTCTTTGAGAGCTCCATCCGAAAACGGTGGCGTTTTGGTGAAATGGGTAATAGTTTAAGGCATTGTTTGGGTTGTGTTCTTCCTTGTGGAGCTTTGGACTT
CATCAGAGTGGTTCATCTCAACGGCCATGTCCAAGAATTCTCTCCGCCGCTCGCCGCCGGTGAGATCCTCAAGTCCAATCCCGGCCACGTCCTCACCACTCCCTCTTCTG
ACGACCACCGCCTCGTTCGTCGTGTCACCATTCTCTCCCCTGAATCTCAACTCCGACGAGGCGGCATCTATTTCTTGATTCCGGCCAATTCCGACCATCGGAAGGCCCCT
AAAAAGCCCTCCTCCACCACCTCCCGCGACGGCGTTTTCCCGGACTCCAACGAGGATGTCATGGTGTTGAAGAAGGCCAAACCCGGCCGCCGGGAACGCCGGAGCAGCCG
CGCGTGCGGCGGCGCGTGGCAGCCTCATCTACAGAGCATTAGTGAAGATTAATTAATACCCAAAACACCCTCCTCCAATCGACGTTGAATTTTTAAAAAAAAAATATATA
TGTCGTAATTCTTGTGATCTTGTCCTTTTTTTTAATTAACCGATCTGGACTTTGACGGCGGCGGCCGATGAACAGAAATGGTAATTGTGATGATCATGTACAGGAATTAA
TGGTTGGTGTTTGTGGATAGAAAAAAGATTATTGATTTTCATTTCTAATTGTAGCTTAATTAAAAAAATCCGTTTAACTTTAAATTTTTAGCAGATTCGAAATTCCCACT
CCATTTTAAATTTTAATGCTTATTTTTGTGGTTAATATAAATCAATCGGCG
Protein sequenceShow/hide protein sequence
MGNSLRHCLGCVLPCGALDFIRVVHLNGHVQEFSPPLAAGEILKSNPGHVLTTPSSDDHRLVRRVTILSPESQLRRGGIYFLIPANSDHRKAPKKPSSTTSRDGVFPDSN
EDVMVLKKAKPGRRERRSSRACGGAWQPHLQSISED