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Tan0018298 (gene) of Snake gourd v1 genome

Gene IDTan0018298
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG04:38667809..38668276
RNA-Seq ExpressionTan0018298
SyntenyTan0018298
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]3.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]3.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]3.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]3.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]3.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
A0A5A7TU93 Gag/pol protein1.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
A0A5A7TWB9 Gag/pol protein1.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
A0A5D3CPJ6 Gag/pol protein1.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
A0A5D3CSZ6 Gag/pol protein1.9e-4664.79Show/hide
Query:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM
        KN  NT+L++DDL+FVL EE  QVP +NA+R VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM
Subjt:  KNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRM

Query:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
         EG SV + VL+MMVH N+AE NGA IDE SQV FILE+LP+
Subjt:  PEGTSVWDQVLDMMVHLNIAESNGASIDELSQVGFILETLPD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATGCAAAAACAAACCGAACACTATATTGGTAGTGGATGATCTGAAGTTTGTGCTAACTGAGGAGTTTGCTCAGGTGCCAGGCTCGAATGCGTCACGAAATGTTCG
TGATGAATATGATCGATGGATCAAGGCCAATGATAAGGCCAAGGTCTACATGCTGGCAAGTATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATAACTGCCAAGG
AAATCATGGATTCGATGCAGGGTATGTTTGGACAACAGTCCACACAGGCCCGACACAATGCCCTAAAGTACATATTTAACTCAAGGATGCCAGAGGGTACATCTGTTTGG
GATCAAGTCCTGGATATGATGGTGCACTTGAACATCGCAGAGTCGAATGGTGCTTCCATCGATGAATTGAGTCAGGTAGGCTTCATTCTAGAAACCCTTCCAGATGTTTC
GTACGGTTTAGAAACAATGTTGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACATGCAAAAACAAACCGAACACTATATTGGTAGTGGATGATCTGAAGTTTGTGCTAACTGAGGAGTTTGCTCAGGTGCCAGGCTCGAATGCGTCACGAAATGTTCG
TGATGAATATGATCGATGGATCAAGGCCAATGATAAGGCCAAGGTCTACATGCTGGCAAGTATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATAACTGCCAAGG
AAATCATGGATTCGATGCAGGGTATGTTTGGACAACAGTCCACACAGGCCCGACACAATGCCCTAAAGTACATATTTAACTCAAGGATGCCAGAGGGTACATCTGTTTGG
GATCAAGTCCTGGATATGATGGTGCACTTGAACATCGCAGAGTCGAATGGTGCTTCCATCGATGAATTGAGTCAGGTAGGCTTCATTCTAGAAACCCTTCCAGATGTTTC
GTACGGTTTAGAAACAATGTTGTTATGA
Protein sequenceShow/hide protein sequence
MTCKNKPNTILVVDDLKFVLTEEFAQVPGSNASRNVRDEYDRWIKANDKAKVYMLASMSDILAKKHEGMITAKEIMDSMQGMFGQQSTQARHNALKYIFNSRMPEGTSVW
DQVLDMMVHLNIAESNGASIDELSQVGFILETLPDVSYGLETMLL