CuGenDBv2

Gene ID	Tan0018306
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Vacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome location	LG08:10517657..10520990
RNA-Seq Expression	Tan0018306
Synteny	Tan0018306
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0033116 - endoplasmic reticulum-Golgi intermediate compartment membrane (cellular component)
InterPro domains	IPR019013 - Vacuolar ATPase assembly integral membrane protein Vma21

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134542.1 uncharacterized protein LOC101206493 [Cucumis sativus]

2.2e-40

89.62

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MA+VIMKFFIASLFMWITPI LL+GFNHN IPG+TQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDP FLAEAKASINQST KAD PSQ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKEK
         NKKE+
Subjt:  NNKKEK

XP_022146488.1 uncharacterized protein LOC111015696 [Momordica charantia]

5.8e-41

90.48

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MASVIMKFF ASLFMWITPIALLYGFNHNLIPG+TQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAFLAEAKASINQS  +ADDPSQ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKE
        N K++
Subjt:  NNKKE

XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]

3.4e-41

90.57

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MA VI KFFIASLFMWITPI LLYGFNHNLIPG+TQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAF+AEAKASINQS  KA+DPSQ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKEK
        NNKKE+
Subjt:  NNKKEK

XP_022977993.1 uncharacterized protein LOC111478118 [Cucurbita maxima]

2.9e-40

88.68

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MA VI KFFIASLFMWITPI LLYGFNHNLIPG+T LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAF+AEAKASINQ+  KA+DPSQ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKEK
        NNKKE+
Subjt:  NNKKEK

XP_038882777.1 protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]

1.7e-40

89.62

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MASVI KFFIASLFMWITPIALLYGFNHNLIPG+TQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFL EAKASINQS  K ++PSQ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKEK
        +NKKE+
Subjt:  NNKKEK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

1.1e-40

89.62

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MA+VIMKFFIASLFMWITPI LL+GFNHN IPG+TQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDP FLAEAKASINQST KAD PSQ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKEK
         NKKE+
Subjt:  NNKKEK

A0A1S4DTT6 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

2.6e-39

86.79

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MA+VI KFFIASLFMWITPI LL+GFNHN IPG+T+LNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAFLAEAKASINQST KAD PS+ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKEK
        +NKKE+
Subjt:  NNKKEK

A0A6J1CYA2 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

2.8e-41

90.48

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MASVIMKFF ASLFMWITPIALLYGFNHNLIPG+TQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAFLAEAKASINQS  +ADDPSQ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKE
        N K++
Subjt:  NNKKE

A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

1.7e-41

90.57

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MA VI KFFIASLFMWITPI LLYGFNHNLIPG+TQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAF+AEAKASINQS  KA+DPSQ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKEK
        NNKKE+
Subjt:  NNKKEK

A0A6J1ISV9 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

1.4e-40

88.68

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MA VI KFFIASLFMWITPI LLYGFNHNLIPG+T LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAF+AEAKASINQ+  KA+DPSQ 
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKEK
        NNKKE+
Subjt:  NNKKEK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

1.7e-30

64.15

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MA V+ KF IAS+FMWI P+A+LYGFNHNL+PG+T L+PHSL LLSGFLAV+SVN VI  YI MAMKEP+ KH+PD AFLAEAK S+N+ T+ A     +
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKEK
          KK++
Subjt:  NNKKEK

AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

1.0e-27

Show/hide

Query:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN
        MA V+ KF IAS+FMWI PIA+LYGFN++L+PG+T L+PHSLTLLSGFLAV+SVNVVI  YI +A+KEP+ KH+PD +F+AEAK S+ + T    +    
Subjt:  MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQN

Query:  NNKKE
          K+E
Subjt:  NNKKE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAGCGTCATTATGAAGTTCTTCATTGCATCACTCTTTATGTGGATAACTCCCATCGCATTGTTGTATGGTTTTAACCATAATTTGATTCCTGGTACAACACAATT
AAATCCACATTCTCTTACACTCTTGAGTGGATTCCTAGCCGTCATATCAGTCAACGTAGTCATTGCTATTTATATTATAATGGCAATGAAAGAACCCTCTAGTAAACATG
AACCGGATCCTGCATTTCTTGCCGAGGCTAAAGCTAGTATAAACCAGTCTACTGAAAAAGCAGATGACCCCTCGCAAAATAATAATAAGAAGGAAAAATAG

mRNA sequence

Show/hide mRNA sequence

CCGCATCAAAACCCCTCTCAATCCTCTGCATCTCTCTCTCGGCTTCTCTCGATTGCTCAAGGTGAGTTCACAAATCTTTATTCCTCCTCCTCCTCCGTCTCTAGTCGACA
GCTCCTGATCCCTAGTTCGTCCAACCTCGGCAGCATCTCGATTTTGGTCGTCTAAATCTCTCATCGCTCATCCTTCTTGCTTTTTCGAAGTACGACTGTATTTGAAGTCC
CGATTTGGAACTTCGAAGCCCTAATTTGTGGTCCAAAACCTGACCTCCGAAATTGAAATCCATCTCCTTGCGCCCTAAAGATTTCATAAGAGCCTCTTGTATGCATTATG
ATGAACTCAAGTTTTCTGGAGTCCACTTTTTATTCTCCACGGCAATGCAAGTCCAATTGTGAAACTTCATTTAAGACATTGTTTACAATTTGAAGGTACCAATGGCAAGC
GTCATTATGAAGTTCTTCATTGCATCACTCTTTATGTGGATAACTCCCATCGCATTGTTGTATGGTTTTAACCATAATTTGATTCCTGGTACAACACAATTAAATCCACA
TTCTCTTACACTCTTGAGTGGATTCCTAGCCGTCATATCAGTCAACGTAGTCATTGCTATTTATATTATAATGGCAATGAAAGAACCCTCTAGTAAACATGAACCGGATC
CTGCATTTCTTGCCGAGGCTAAAGCTAGTATAAACCAGTCTACTGAAAAAGCAGATGACCCCTCGCAAAATAATAATAAGAAGGAAAAATAGGAAATGAGAGAGACAGGC
TCTGATGAGGAACACTTTCAAGCTTAAGATTCCAGGATTTGAGATGAGAATCAGTCTCATGTGTTATCAGACTATCTGCCAATCAATCGAGTTGTAGGAAGAACAAAATG
TTCTTTTTTCTCTGGTTTTGTTTCATTAAGATGAACTGCATTTAGATTTGATCTTATTTTCTACCAGTGATGTTCTTCACAATGTGTCGTCAACTCTTTGTTTCTACCGT
CAAAATGTGAAGAGATGTAATAGCTTGGATGTGTTGAGGATCCTACAAAGTAAGAATGTAGAGTTACCCTTACAATTTATAAGATCATGGATCATGTTTGAGAGTGATTT
TGGAGTGATCAAAATCACTTTTGACATGTTTAAAATCACTCTTTTGATGAAAAGAGTGTTGTTTGTAAATATTAAGAAGGTGATTTTGGAAAAATCTAAAATTATTTAAA
GTGATT

Protein sequence

Show/hide protein sequence

MASVIMKFFIASLFMWITPIALLYGFNHNLIPGTTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTEKADDPSQNNNKKEK

Tan0018306 (gene) of Snake gourd v1 genome