CuGenDBv2

Gene ID	Tan0018379
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Genome location	LG01:21687967..21697864
RNA-Seq Expression	Tan0018379
Synteny	Tan0018379
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596817.1 hypothetical protein SDJN03_09997, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-84

75.97

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEVGP ISGEDVIEKLKDDGDFDKLR KIIRKL+D+E LRNNIVAIVKQS ALNRAG ENVKPRQLSDAI+DEVGDEIMSKVSDNLWEIIRS DGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQND------
        TETVQS+Y+ LANPKAKE+A+ASTHHAIPVWKE DNNGSMKASTSQSEH+ET+ +EP G+SFAGNH+N  KQ V+E+QF KR     DNDS+ND      
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQND------

Query:  ----EGYHSN---NVPDADAGSDEDPDVPPGFG
             G+ SN   N    D  SDEDPDVPPGFG
Subjt:  ----EGYHSN---NVPDADAGSDEDPDVPPGFG

XP_004147961.1 uncharacterized protein LOC101206797 [Cucumis sativus]

1.5e-91

76.86

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEVGP +SGE VIEKLKDDGDFDKLR KIIRKL+D+E LRNNIVAIVKQS ALNRAGTENVKPRQ+SDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN
        TETVQSVYNKLANPKA+E A+ASTHHAIP  KEGDNNGSMKASTSQ EHSE D VEPPGFSFAGNH+NN +Q +E++QFPK HE RH+NDS+N EG++ N
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN

Query:  NVPDA--------------------DAGS--DEDPDVPPGFG
        NV DA                    DAGS  DEDPDVPPGFG
Subjt:  NVPDA--------------------DAGS--DEDPDVPPGFG

XP_008448942.1 PREDICTED: uncharacterized protein LOC103490958 [Cucumis melo]

3.0e-92

77.64

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEVGP ISGE VIEKLKDDGDFDKLR KIIRKL+D+E LRNNIVAIVKQS ALNRAGTENVKPRQ+SDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN
        TETVQSVYNKLANPKA+E A+ASTHHA+PVWKEGDNNGSMKASTSQ EHSE D  EPPGFSFAGNH+NN KQ +E++QFPK  E RH NDS+N EG++ N
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN

Query:  NVPDA-----------------DAGSDEDPDVPPGFG
        NV DA                 D   DEDPDVPPGFG
Subjt:  NVPDA-----------------DAGSDEDPDVPPGFG

XP_022152780.1 uncharacterized protein LOC111020416 [Momordica charantia]

1.6e-85

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEV PNISGEDVIEKLKDDGDFD LR KIIRKL+D+E LR+NI+AIVKQS ALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN
        TETVQSVYNKLANPK  E+A AST H   V KE  NNG MKASTS  E SE D VEPPGFSFAGNH+NN KQ VEE +FP+RHE RHD +S+N EG+H N
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN

Query:  NVPDA--------------------DAGSDEDPDVPPGFG
        NV DA                    DAGSDEDPDVPPGFG
Subjt:  NVPDA--------------------DAGSDEDPDVPPGFG

XP_038903340.1 uncharacterized protein LOC120089960 [Benincasa hispida]

6.3e-90

77.08

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        ME+GP ISGEDVIEKLKDDGDFDKLR KIIRKL+D+E LRNNI+AIVKQS ALNRAG ENVKPRQLSDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN
        TETVQSVYNKLANPKA+E A+AST H IPV KE  NNGSMKASTSQ +HSE D +EPPGFSFAGNH+NN KQ VEE+QFPK HE RH+NDS+N EG+H N
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN

Query:  NVPDA--------------------DAGSDEDPDVPPGFG
        NV DA                    DAGSDEDPDVPPGFG
Subjt:  NVPDA--------------------DAGSDEDPDVPPGFG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4H3 Uncharacterized protein

7.3e-92

76.86

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEVGP +SGE VIEKLKDDGDFDKLR KIIRKL+D+E LRNNIVAIVKQS ALNRAGTENVKPRQ+SDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN
        TETVQSVYNKLANPKA+E A+ASTHHAIP  KEGDNNGSMKASTSQ EHSE D VEPPGFSFAGNH+NN +Q +E++QFPK HE RH+NDS+N EG++ N
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN

Query:  NVPDA--------------------DAGS--DEDPDVPPGFG
        NV DA                    DAGS  DEDPDVPPGFG
Subjt:  NVPDA--------------------DAGS--DEDPDVPPGFG

A0A1S3BKW9 uncharacterized protein LOC103490958

1.5e-92

77.64

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEVGP ISGE VIEKLKDDGDFDKLR KIIRKL+D+E LRNNIVAIVKQS ALNRAGTENVKPRQ+SDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN
        TETVQSVYNKLANPKA+E A+ASTHHA+PVWKEGDNNGSMKASTSQ EHSE D  EPPGFSFAGNH+NN KQ +E++QFPK  E RH NDS+N EG++ N
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN

Query:  NVPDA-----------------DAGSDEDPDVPPGFG
        NV DA                 D   DEDPDVPPGFG
Subjt:  NVPDA-----------------DAGSDEDPDVPPGFG

A0A6J1DEX6 uncharacterized protein LOC111020416

7.8e-86

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEV PNISGEDVIEKLKDDGDFD LR KIIRKL+D+E LR+NI+AIVKQS ALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN
        TETVQSVYNKLANPK  E+A AST H   V KE  NNG MKASTS  E SE D VEPPGFSFAGNH+NN KQ VEE +FP+RHE RHD +S+N EG+H N
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSN

Query:  NVPDA--------------------DAGSDEDPDVPPGFG
        NV DA                    DAGSDEDPDVPPGFG
Subjt:  NVPDA--------------------DAGSDEDPDVPPGFG

A0A6J1FJ59 uncharacterized protein LOC111446176

1.5e-84

75.54

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEVGP ISGEDVIEKLKDDGDFDKLR KIIRKL+D+E LRNNIVAIVKQS ALNRAG ENVKPRQLSDAI+DEVGDEIMSKVSDNLWEIIRS DGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQND------
        TETVQS+Y+ LANPKAKE+A+ASTHHAIPVWKE DNNGSMKASTSQSEH+E++ +EP G+SFAGNH+N  KQ V+E+QF KR     DNDS+ND      
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQND------

Query:  ----EGYHSN---NVPDADAGSDEDPDVPPGFG
             G+ SN   N    D  SDEDPDVPPGFG
Subjt:  ----EGYHSN---NVPDADAGSDEDPDVPPGFG

A0A6J1KZH9 uncharacterized protein LOC111498492

7.3e-84

75.11

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEVGP ISGEDVIEKLKDDGDFDKLR KIIRKL+D+E LRNNIVAIVKQS ALNRAG ENVKPRQLSD I+DEVGDEIMSKVSDNLWEIIRS DGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQND------
        TETVQS+YN LANPKAKE+A+A+THHAIPVWKE DNNGSMKASTSQSEH+ET+ +EP GFSFAGNH+N  KQ V+E+QF KR      NDS+ND      
Subjt:  TETVQSVYNKLANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQND------

Query:  ----EGYHSNNVPD---ADAGSDEDPDVPPGFG
             G+ SN        D  SDEDPDVPPGFG
Subjt:  ----EGYHSNNVPD---ADAGSDEDPDVPPGFG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12530.1 unknown protein

1.9e-36

43.24

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Query:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        M +   IS E+V+EKLKDDGDFD+LR KIIR+L+++E LRNN++++VK+ST+L R G +N+K RQLSDAI++EVG +++S++SD LW IIRS DGMKNEI
Subjt:  MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKAKEEAKAS--THHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYH
         ETVQSVY  L+NP+ ++   ++    H IP  K+         +TS +   + +L               +K  VE+     + E   D D Q+++G  
Subjt:  TETVQSVYNKLANPKAKEEAKAS--THHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYH

Query:  SNNVPDADAGSDEDPDVPPGFG
         N+        +EDP++PPGFG
Subjt:  SNNVPDADAGSDEDPDVPPGFG

AT1G56420.1 unknown protein

1.3e-13

30.46

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Query:  ISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQS
        I  EDV+E L +DG  D LR +II +L+ +E L++  + + ++S  LN  G E    R+L DA+  E+   ++ K S ++W++I   DG+  EI ETV+ 
Subjt:  ISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQS

Query:  VYNKLANPKAKEEAKASTHHA-IPVWKEGDNNGSMKASTSQSEHSETDLVE
        V+  L+  +    + ++     + + KE +   S K    +   SE +  E
Subjt:  VYNKLANPKAKEEAKASTHHA-IPVWKEGDNNGSMKASTSQSEHSETDLVE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGGTCGGTCCCAATATTAGTGGAGAAGATGTCATCGAAAAGCTCAAGGATGACGGTGACTTCGATAAACTCCGTCGCAAGATCATTCGCAAGCTCAGAGACGATGA
AGGATTGCGCAATAACATAGTTGCTATAGTGAAGCAATCGACAGCTCTTAATCGGGCAGGAACTGAAAATGTAAAGCCTCGCCAACTTTCTGATGCAATATATGACGAGG
TTGGGGATGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATAATCAGATCAGCTGATGGCATGAAAAATGAAATCACAGAAACTGTACAATCAGTCTACAATAAG
TTAGCGAACCCGAAAGCCAAGGAAGAGGCCAAAGCATCCACCCACCATGCGATACCAGTTTGGAAGGAAGGTGATAATAATGGTTCAATGAAGGCCTCCACCAGTCAATC
TGAACATTCTGAGACTGATCTTGTAGAACCTCCAGGTTTCTCCTTTGCTGGTAATCATTCAAACAACGTTAAGCAGCGAGTAGAGGAGGTGCAATTTCCGAAACGTCACG
AAGTAAGGCACGATAATGATAGTCAAAACGACGAGGGGTACCATTCAAACAATGTGCCTGATGCAGATGCTGGTAGTGATGAAGACCCGGATGTGCCCCCTGGTTTCGGT
TGA

mRNA sequence

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Protein sequence

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MEVGPNISGEDVIEKLKDDGDFDKLRRKIIRKLRDDEGLRNNIVAIVKQSTALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNK
LANPKAKEEAKASTHHAIPVWKEGDNNGSMKASTSQSEHSETDLVEPPGFSFAGNHSNNVKQRVEEVQFPKRHEVRHDNDSQNDEGYHSNNVPDADAGSDEDPDVPPGFG

Tan0018379 (gene) of Snake gourd v1 genome