; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018390 (gene) of Snake gourd v1 genome

Gene IDTan0018390
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-CH-type domain-containing protein
Genome locationLG03:64748740..64749983
RNA-Seq ExpressionTan0018390
SyntenyTan0018390
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595366.1 hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia]8.2e-6882.32Show/hide
Query:  MAALETAGADLEEG-----GGRRSGVGEVK---ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHE
        MAALETAG DLEEG     GGRR+  GEVK   ERDCRICHLGLESNS+ECG AIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHS+V+N VG HE
Subjt:  MAALETAGADLEEG-----GGRRSGVGEVK---ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHE

Query:  LEQTEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        LEQ EQLHE NNGT+ST  VAASVAA+P GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  LEQTEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

KAG7027374.1 hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-6781.71Show/hide
Query:  MAALETAGADLEEG-----GGRRSGVGEVK---ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHE
        MAALETAG DLEEG     GGR +  GEVK   ERDCRICHLGLESNS+ECG AIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHS+V+N VG HE
Subjt:  MAALETAGADLEEG-----GGRRSGVGEVK---ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHE

Query:  LEQTEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        LEQ EQLHE NNGT+ST  VAASVAA+P GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  LEQTEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_022151515.1 uncharacterized protein LOC111019441, partial [Momordica charantia]4.7e-6378.26Show/hide
Query:  MAALETAG-ADLEEG----GGRRSGVGEVKERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQ
        +AA++T G ADLE+G    GG R    E  ERDCRICHLGLES+S+ECGI IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHSVV NV+GAHE+E 
Subjt:  MAALETAG-ADLEEG----GGRRSGVGEVKERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQ

Query:  TEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
         EQL ESNN TVST  VA SV   P GGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  TEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_023517920.1 uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo]2.4e-6782.32Show/hide
Query:  MAALETAGADLEEG-----GGRRSGVGEVK---ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHE
        MAALETAG DLEEG     GGRR+  GEVK   ERDCRICHLGLESNS+ECG AIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHS+V+NV G HE
Subjt:  MAALETAGADLEEG-----GGRRSGVGEVK---ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHE

Query:  LEQTEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        LEQ EQLHE NNGT+ST  VAASV AAP GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  LEQTEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_038883458.1 uncharacterized protein LOC120074413 [Benincasa hispida]1.3e-6580.72Show/hide
Query:  MAALETAGADLEEG-----GGRRSGVG-EVK----ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGA
        MAALETAGADLE+G       R SGVG EVK    ERDCRICHLGL SNSNE G+ IELGC CKNDL+ AHKHCAEAWFKIRGNKTCEICHS+V+NV+  
Subjt:  MAALETAGADLEEG-----GGRRSGVG-EVK----ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGA

Query:  HELEQTEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
         E EQTEQLHESNNGTVSTA VAASVAA P GGRSFW VHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  HELEQTEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

TrEMBL top hitse value%identityAlignment
A0A0B0MSH9 E3 ubiquitin-protein ligase MARCH21.1e-4971.53Show/hide
Query:  SGVGEVK------ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMV
        SG  E+K      E+DCRICHLGLESNS+E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHS+ +NVVG +E+E TEQ +E+N+   STA  
Subjt:  SGVGEVK------ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMV

Query:  AASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        A S AA+    RSFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A2P5YEN9 RING-CH-type domain-containing protein1.1e-4971.53Show/hide
Query:  SGVGEVK------ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMV
        SG  E+K      E+DCRICHLGLESNS+E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHS+ +NVVG +E+E TEQ +E+N+   STA  
Subjt:  SGVGEVK------ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMV

Query:  AASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        A S AA+    RSFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A5D2JJR0 RING-CH-type domain-containing protein1.1e-4970.14Show/hide
Query:  SGVGEVK------ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMV
        SG  E+K      E+DCRICHLGLESNS+E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHS+ +NVVG +E+E TEQ +E+N+ T +TA++
Subjt:  SGVGEVK------ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMV

Query:  AASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
            AA+    RSFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6J1CWG7 uncharacterized protein LOC111015024 isoform X21.7e-5071.53Show/hide
Query:  SGVGEVK------ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMV
        +G+ E+K      ERDCRICHLGLESNS E GI IELGCSCK+DLAAAHKHCAE WFKIRGNKTCEICHS+ +N++G HE+E TEQ  ESNN + STA V
Subjt:  SGVGEVK------ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMV

Query:  AASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        AAS+ ++    +SFW+ HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6J1DBE4 uncharacterized protein LOC1110194412.3e-6378.26Show/hide
Query:  MAALETAG-ADLEEG----GGRRSGVGEVKERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQ
        +AA++T G ADLE+G    GG R    E  ERDCRICHLGLES+S+ECGI IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHSVV NV+GAHE+E 
Subjt:  MAALETAG-ADLEEG----GGRRSGVGEVKERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQ

Query:  TEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
         EQL ESNN TVST  VA SV   P GGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  TEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein1.2e-1653.95Show/hide
Query:  SGVGEVKERDCRICHLGLESNSNECG-------IAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNV
        SGVG   ER CRICH G + +    G         IE+GC CKN+L  AH HCAEAWFK+RGN  CEIC    KNV
Subjt:  SGVGEVKERDCRICHLGLESNSNECG-------IAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNV

AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein1.3e-3455.15Show/hide
Query:  ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHEL-EQTEQLHESNNGTVSTAMVAASVAAAPGGGR
        E+DCRICHLG+E++    G AIELGCSCK+DLA AH+ CAE WFKI+G+KTCEIC SV +NV GA+E+   T +  E  NG           AA  GGG 
Subjt:  ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHEL-EQTEQLHESNNGTVSTAMVAASVAAAPGGGR

Query:  SF----WQVHRVLNFLLACMVFAFVISWLFHFNVPS
        +     WQ  RV+N +LACMVF F ISW+FHF+V S
Subjt:  SF----WQVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein3.7e-3453.79Show/hide
Query:  ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGA-HELEQTEQLHESNNGTVSTAMVAASVAAAPGGGR
        E+DCRICHLGLES+ +ECG  + LGCSCK+DL   HK CA+ WFKI+GNKTCEIC S+ +N     +E+ QT    E+N   V        VA +    R
Subjt:  ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGA-HELEQTEQLHESNNGTVSTAMVAASVAAAPGGGR

Query:  SFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
           + +R LNFLL CMV AFVISW FHFN+PS
Subjt:  SFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein5.7e-4363.36Show/hide
Query:  ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMVAASVAAAPGGGRS
        ERDCRICH+ L++ + E G+ IELGCSCK DLAAAHKHCAE WFKI+GNK CE+C S+  NVVG+ E+E  E  +E+N     T   +         GRS
Subjt:  ERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTAMVAASVAAAPGGGRS

Query:  FWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        FWQ HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  FWQVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein2.4e-2543.4Show/hide
Query:  RDCRICHLGLESNSNE-------------------------------CGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQ
        RDCRICHL LE+N                                   G+ ++LGCSCK DL  AH  CAE WFKI+GN TCEIC ++  NV G    EQ
Subjt:  RDCRICHLGLESNSNE-------------------------------CGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQ

Query:  TEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNV
        +    ES   T S A  AA  +      R  W    V+NFLLA MVFAFV+SWLFHF V
Subjt:  TEQLHESNNGTVSTAMVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTTTGGAGACGGCCGGAGCTGATTTGGAGGAAGGCGGCGGACGGCGAAGTGGGGTTGGTGAAGTGAAGGAGAGAGATTGTAGGATTTGCCATTTGGGGTTGGA
GAGTAACAGCAATGAGTGTGGAATTGCAATTGAATTAGGCTGTTCTTGTAAGAATGATTTGGCTGCTGCCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAA
ACAAGACGTGTGAGATATGTCATTCTGTTGTGAAAAATGTCGTTGGAGCACACGAACTCGAACAAACGGAGCAGCTCCATGAGTCGAACAATGGGACGGTATCGACAGCG
ATGGTTGCAGCGTCGGTGGCTGCCGCTCCTGGAGGTGGCCGGAGCTTTTGGCAGGTTCACCGGGTACTGAATTTTCTTCTTGCTTGTATGGTATTTGCTTTTGTTATATC
TTGGCTGTTTCATTTCAATGTGCCATCATAA
mRNA sequenceShow/hide mRNA sequence
CCTGTTGTCAATCTGATGAATCCAATTGGAATCTCCATTCCCACAAAATTCCCCTTCTTTTTCCTTTCCTCTTCTCTAAATTCCACCGAACCCATCTTCCATTTTGCTCT
GTCGCTAAATTTCATGTCTTTTTTGAGTTTCTGATTCAGGGGTTCTCTTAAAAATGGCGGCTTTGGAGACGGCCGGAGCTGATTTGGAGGAAGGCGGCGGACGGCGAAGT
GGGGTTGGTGAAGTGAAGGAGAGAGATTGTAGGATTTGCCATTTGGGGTTGGAGAGTAACAGCAATGAGTGTGGAATTGCAATTGAATTAGGCTGTTCTTGTAAGAATGA
TTTGGCTGCTGCCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGTCATTCTGTTGTGAAAAATGTCGTTGGAGCACACGAAC
TCGAACAAACGGAGCAGCTCCATGAGTCGAACAATGGGACGGTATCGACAGCGATGGTTGCAGCGTCGGTGGCTGCCGCTCCTGGAGGTGGCCGGAGCTTTTGGCAGGTT
CACCGGGTACTGAATTTTCTTCTTGCTTGTATGGTATTTGCTTTTGTTATATCTTGGCTGTTTCATTTCAATGTGCCATCATAA
Protein sequenceShow/hide protein sequence
MAALETAGADLEEGGGRRSGVGEVKERDCRICHLGLESNSNECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVKNVVGAHELEQTEQLHESNNGTVSTA
MVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS