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Tan0018408 (gene) of Snake gourd v1 genome

Gene IDTan0018408
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand
Genome locationLG02:84546364..84546843
RNA-Seq ExpressionTan0018408
SyntenyTan0018408
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]5.4e-3584.62Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL
        MGNSKS  YKRVLVPF+EEQLA+VFK+HDRDGDG LTKEELKQAF YLGSRFS+FRV+EALRAAD NGDGVISMDEM KLI+YAK+RKYT+
Subjt:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3484.62Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL
        MGNSKS  YKRVLVP TEEQLA +FKSHDRDGDGKLTKEELKQAFNYLGSRFSSFR  EALRAADA+GDG I+M EM KLIQY K+RKYTL
Subjt:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]4.6e-3485.71Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL
        MGNSKS  YKRVLVPF+EEQLA VFK+HD DGDGKLTKEELKQAF+YLGSRFSSFRV+EALRAAD +GDG ISM EM KLIQYAKSRKYTL
Subjt:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-3787.91Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL
        MGN+KST YKRVLVPFTEEQLA +FKSHDRDGDGKL+KEELKQAFNYLGSRFSSFRVKEALRAAD NGDG ISMDEM KLI+Y K RKYTL
Subjt:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-3485.71Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL
        MGNSKS  YKRVLVPF+EEQLA VFK+HD DGDGKLTKEELKQAF+YLGSRFSSFRV+EALRAAD +GDG ISM EM KLIQYAKSRKYTL
Subjt:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL

TrEMBL top hitse value%identityAlignment
A0A0A0LL93 Uncharacterized protein1.4e-1762.35Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAK
        MGN  S+         +EEQLA +FK HD D D KLTKEEL +AFNYLGSR+++ RVKEA+RA DAN DGVIS+DEM KLI Y K
Subjt:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAK

A0A0A0LRB6 Uncharacterized protein1.3e-3483.52Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL
        MGNSKS  YKRVLVPF+EEQLA+VFK+HDRDGDG LTKEELKQAF YLGSRF +FRV+EALRAAD NGDGVISMDEM KLI+YAK+RKYT+
Subjt:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL

A0A2N9FYQ0 Uncharacterized protein1.2e-1954.02Show/hide
Query:  KSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL
        K   +KR  +PFTEEQL ++FKSHD DGDGKL+++E+K+AF YLGSR+ ++R  +A+  ADA+ DG I  +E+KKL+QYA    YT+
Subjt:  KSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein2.6e-3584.62Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL
        MGNSKS  YKRVLVPF+EEQLA+VFK+HDRDGDG LTKEELKQAF YLGSRFS+FRV+EALRAAD NGDGVISMDEM KLI+YAK+RKYT+
Subjt:  MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL

A0A7N2KRS3 Uncharacterized protein1.4e-2057.47Show/hide
Query:  KSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL
        K+  +KR  VPF E+QL ++FKSHD DGDGKL+++ELK AF YLGSR+ ++R  +ALR ADAN DG I+ DE+KKL++YA    YT+
Subjt:  KSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTL

SwissProt top hitse value%identityAlignment
A4UHC0 Calmodulin3.8e-0740Show/hide
Query:  TEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI
        TEE+L + FK  DRDG+G ++  EL+     LG + +   V E +R AD +GDG I+ +E  K++
Subjt:  TEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI

O96102 Calmodulin2.9e-0738.46Show/hide
Query:  TEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI
        TEE++ + FK  D+DG+G ++  EL+     LG + S   V E +R AD +GDG ++ DE  K++
Subjt:  TEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI

P05933 Calmodulin7.7e-0842.19Show/hide
Query:  EEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI
        EE++ + FK  D+DG+G +T EEL      LG R S   V + +R AD +GDGVI+ +E  ++I
Subjt:  EEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI

P24044 Calmodulin7.7e-0840Show/hide
Query:  TEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI
        TEE+L + F+  DRDGDG ++ +EL+     LG + ++  V E +R AD +GDG I+ +E  K++
Subjt:  TEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI

P62203 Calmodulin7.7e-0840Show/hide
Query:  TEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI
        TEE+L + F+  DRDGDG ++ +EL+     LG + ++  V E +R AD +GDG I+ +E  K++
Subjt:  TEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family1.0e-0739.71Show/hide
Query:  VPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI
        V    EQL ++FKS DRDG+G ++  EL  A   +G   +   + E ++ AD NGDGVIS  E   ++
Subjt:  VPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI

AT3G25600.1 Calcium-binding EF-hand family protein4.6e-0839.71Show/hide
Query:  VPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI
        V   +EQL +VF+S DRDG+G +T  EL  +   +G   +   + E +  AD+NGDGVIS +E   ++
Subjt:  VPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLI

AT4G12860.1 EF hand calcium-binding protein family3.9e-0738.1Show/hide
Query:  QLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQ
        +L+ VF+  D++GDGK+ K ELK  F  +G       + E +   D NGDG + +DE   L Q
Subjt:  QLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQ

AT5G12180.1 calcium-dependent protein kinase 173.0e-0735.44Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQ---LADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDE
        M N K    + +    +EE+   L ++FK  D D  G +T EEL+Q     G+R S + V++ + AADA+G+G I   E
Subjt:  MGNSKSTRYKRVLVPFTEEQ---LADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDE

AT5G19360.1 calcium-dependent protein kinase 343.0e-0735.44Show/hide
Query:  MGNSKSTRYKRVLVPFTEEQ---LADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDE
        M N K    + +    +EE+   L ++FK  D D  G +T EEL+Q     G+R S + V++ + AADA+G+G I   E
Subjt:  MGNSKSTRYKRVLVPFTEEQ---LADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCCAAAAGTACACGTTACAAACGAGTTTTGGTTCCATTCACAGAGGAGCAACTGGCCGACGTTTTCAAGAGCCATGACCGAGACGGTGATGGCAAGCTGAC
AAAGGAGGAGTTGAAACAAGCCTTCAACTATTTGGGCTCACGCTTCAGCTCGTTCAGAGTCAAAGAAGCCCTACGCGCTGCCGATGCTAATGGCGACGGCGTCATCAGCA
TGGACGAGATGAAGAAGCTAATTCAATATGCCAAAAGTCGTAAATACACTCTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAAAACTAAGTCCTTTTCTTCTTCTTCTTCTTCTTTTTCGATGGGGAATTCCAAAAGTACACGTTACAAACGAGTTTTGGTTCCATTCACAGAGGAGCAACTGGCCGA
CGTTTTCAAGAGCCATGACCGAGACGGTGATGGCAAGCTGACAAAGGAGGAGTTGAAACAAGCCTTCAACTATTTGGGCTCACGCTTCAGCTCGTTCAGAGTCAAAGAAG
CCCTACGCGCTGCCGATGCTAATGGCGACGGCGTCATCAGCATGGACGAGATGAAGAAGCTAATTCAATATGCCAAAAGTCGTAAATACACTCTTTTTTAAAACTACGTA
TACATGTTTGTTGCTTTTACCAACTATGTAAGTTATTTCTTGTCTATGGTTCATGTGTGTATTAATGTGAATTTTAAGGAGGGGACATAGTCCTCTTTGTTAAATGATAA
AAGAAAAAAAATTGTTAAATGGAATTTTGCCTTTTTTTTA
Protein sequenceShow/hide protein sequence
MGNSKSTRYKRVLVPFTEEQLADVFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRVKEALRAADANGDGVISMDEMKKLIQYAKSRKYTLF