| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 9.8e-258 | 67.68 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
++DMV+SMMSYA LPSSFWGY VETAV+ILNNVPSKSVSETPF+LW+GRK GYPKETRGGLF+DP+E+
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
+VFVSTNATFLEEDH+R+HKPRSK+VLSE +V ++ S+RV +T S Q PSQ L MPRRSGRV++QP+RY+GL+ETQVVIPDD EDP +Y
Subjt: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
Query: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
QAM D DKD+WV AMD +MESMYFN VW+LVD P+GVKPIGCKWIYKRKR GKVQT KARLVAKGYTQ EGVDYEETFSPVAM+KSI ILL+I +YD
Subjt: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
Query: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
YE+WQMDVKT FLNGNLEE+I+M +P+GFI GQ+ K GLK VLYVDDILLIG
Subjt: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
Query: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
N+VGYLTD+K WLA QF MKDLG+AQ+VLGIQI+R+RKNKTLALSQ +YIDK+L+R+ MQ+SKKGLLPFRH VH SKE+ PKTPQ VEDMRR PYAS VG
Subjt: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
Query: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIA
SLMYAMLCTRP IC+AV +VSRYQSNPG +HWT VK +LKYLRRTR+YMLVYGAKDL LTGYTDSDFQTDKDSRKSTSG +KQGCIA
Subjt: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIA
Query: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
DSTMEAEYVAACEAAKE VWLRKF+ + EVVPNM L ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREIV RGDVIVTKIA EHN+
Subjt: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 7.8e-255 | 67.1 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
++DMV+SMMSYA LPSSFWGY VETAV+ILNNVPSKSVSETPF+LW+GRK GYPKETRGGLF+DPKE+
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
+VFVSTNATFLEEDH+R+HKPRSK+VLSE +V ++ S+RV +T S Q PSQ L MPRRSGRV++QP+RY+GL+ETQVVIPDD EDP +Y
Subjt: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
Query: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
QAM D DKD+WV AMD +MESMYFN VW+LVD P+GVKPIGCKWIYKRKR GKVQT KARLVAKGYT+ EGVDYEETFS VAM+KSI ILL+I +YD
Subjt: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
Query: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
YE+WQMDVKT FLNGNLEE+I+M +P+GFI GQ+ K GLK VLYVDDILLIG
Subjt: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
Query: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
N+VGYLTD+K WLA QF MKDLG+ Q+VLGIQI+R+RKNKTLALSQ +YIDK+L+R+ MQ+SKKGLLPFRH VH SKE+ PKTPQ VEDMRR PYAS VG
Subjt: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
Query: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTS--------------GVKQGCIA
SLMYAMLCTRP IC+AV +VSRYQSNPG +HWT VK ILKYLRRTR+YMLVYGAKDL LTGYT+SDFQTDKDSRKSTS +KQGCIA
Subjt: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTS--------------GVKQGCIA
Query: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
DSTMEAEYVAACEAAKE VWL+KF+ + EVVPNM L ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREIV RGDVIVTKIA EHN+
Subjt: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
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| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 9.2e-248 | 65.99 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
++DMV+SMMSYAHLP+SFWGY V+TAVYILN VPSKSVSETP KLW GRK GYPK TRGG FYDPK++
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTI----AKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDP
KVFVSTNATFLEEDHIR+HKPRSKIVL+EL +V + S TRV S + Q L PRRSGRV P RYM L+ET VI D D EDP
Subjt: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTI----AKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDP
Query: STYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIV
T+ +AM D DKD+W+ AM+ ++ESMYFN VWDLVD+PDGVKPIGCKWIYKRKRG DGKVQT KARLVAKGYTQVEGVDYEETFSPVAM+KSI ILL+I
Subjt: STYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIV
Query: AYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDI
AY+DYE+WQMDVKT FLNGNLEE IYM +P+GFI GQ+ K GLK VLYVDDI
Subjt: AYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDI
Query: LLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYA
LLIGN++G LTDIK WLATQF MKDLG+AQFVLGIQI R+RKNK LALSQ SYIDK+++++ MQ+SK+GLLPFRH V SKE+CPKTPQ VE+MR PYA
Subjt: LLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYA
Query: SVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQ
S VGSLMYAMLCTRP IC+AV +VSRYQSNPG HWT VKTILKYLRRTR+YMLVYG+KDL LTGYTDSDFQTD+DSRKSTSG +KQ
Subjt: SVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQ
Query: GCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
GCIADSTMEAEYVAACEAAKE VWLR F+++ EVVPNM ITLYCDNSGAV NSREPRSHKRGKHIERKYHLIREIVHRGDVIVT+IA HNV
Subjt: GCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 9.8e-258 | 67.68 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
++DMV+SMMSYA LPSSFWGY VETAV+ILNNVPSKSVSETPF+LW+GRK GYPKETRGGLF+DP+E+
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
+VFVSTNATFLEEDH+R+HKPRSK+VLSE +V ++ S+RV +T S Q PSQ L MPRRSGRV++QP+RY+GL+ETQVVIPDD EDP +Y
Subjt: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
Query: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
QAM D DKD+WV AMD +MESMYFN VW+LVD P+GVKPIGCKWIYKRKR GKVQT KARLVAKGYTQ EGVDYEETFSPVAM+KSI ILL+I +YD
Subjt: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
Query: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
YE+WQMDVKT FLNGNLEE+I+M +P+GFI GQ+ K GLK VLYVDDILLIG
Subjt: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
Query: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
N+VGYLTD+K WLA QF MKDLG+AQ+VLGIQI+R+RKNKTLALSQ +YIDK+L+R+ MQ+SKKGLLPFRH VH SKE+ PKTPQ VEDMRR PYAS VG
Subjt: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
Query: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIA
SLMYAMLCTRP IC+AV +VSRYQSNPG +HWT VK +LKYLRRTR+YMLVYGAKDL LTGYTDSDFQTDKDSRKSTSG +KQGCIA
Subjt: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIA
Query: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
DSTMEAEYVAACEAAKE VWLRKF+ + EVVPNM L ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREIV RGDVIVTKIA EHN+
Subjt: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
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| KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa] | 2.9e-249 | 67.77 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRKGYPKETRGGLFYDPKEDKVFVSTNATFLEEDHIRDHKPRSKIVLSELDGT
++DMV+SMMSYAHLP+SFWGY V+TAVYILN VPSKSVSETP KLW G KGYPK TRGG FYDPK++KVFVSTNATFLEEDHIR+HKPRSKIVL+EL
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRKGYPKETRGGLFYDPKEDKVFVSTNATFLEEDHIRDHKPRSKIVLSELDGT
Query: IAK----VANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWD
K V + S TRV S + Q L PR+SGRV P RYM L+ET VI D D EDP T+ +AM D DKD+W+ AM+ ++ESMYFN VWD
Subjt: IAK----VANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWD
Query: LVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGF
L+D+PDGVKPIGCKWIYKRKRG DGKVQT KARLVAKGYTQVEGVDYEETFSPVAM+KSI ILL+I AY+DYE+WQMDVKT FLNGNLEE IYM +P+GF
Subjt: LVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGF
Query: IELGQKSK------RFAGLK----------------------------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVL
I GQ+ K GLK VLYVDDILLIGN++G LTDIK WLATQF MKDLG+AQFVL
Subjt: IELGQKSK------RFAGLK----------------------------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVL
Query: GIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGH
GIQI R+RKNK LALSQ SYIDK+++++ MQ+SK+GLLPFRH V SKE+CPKTPQ VE+MR PYAS VGSLMYAMLCTRP IC+AV +VSRYQSNPG
Subjt: GIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGH
Query: EHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFE
HWT VKTILKYLRR R+Y LVYG+KDL LTGYTDSDFQTD+DSRKST G +KQGCIADSTMEAEYV ACEAAKE VWLR F+++ E
Subjt: EHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFE
Query: VVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNVLILLQR
VVPNM ITLYCDNSGAV NSREPRSHKRGKHIERKYHLIREIVHRGDVIVT+IA HN+ L +
Subjt: VVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNVLILLQR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 2.2e-247 | 65.85 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
++DMV+SMMSYAHLP+SFWGY V+TAVYILN VPSKSVSETP KLW GRK GYPK TRGG FYDPK++
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTI----AKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDP
KVFVSTNATFLEEDHIR+HKPRSKIVL+EL +V + S TRV S + Q L PRRSGRV P RYM L+ET VI D D EDP
Subjt: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTI----AKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDP
Query: STYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIV
T+ +AM D DKD+W+ AM+ ++ESMYFN VWDLVD+PDGVKPIGCKWIYKRKRG DGKVQT KARLVAKGYTQVEGVDYEETFSPVAM+KSI ILL+I
Subjt: STYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIV
Query: AYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDI
AY+DYE+WQMDVKT FLNGNLEE IYM +P+GFI GQ+ K GLK VLYVDDI
Subjt: AYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDI
Query: LLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYA
LLIGN++G LTDIK WLATQF MKDLG+AQFVLGIQI R+RKNK LALSQ SYIDK+++++ MQ+SK+GLLPFRH V SKE+CPKTPQ VE+MR PYA
Subjt: LLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYA
Query: SVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQ
S VGSLMYAMLCTRP IC+AV +VSRYQSNPG HWT VKTILKYLRRTR+Y LVYG+KDL LTGYTDSDFQTD+DSRKSTSG +KQ
Subjt: SVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQ
Query: GCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
GCIADSTMEAEYVAACEAAKE VWLR F+++ EVVPNM ITLYCDNSGAV NSREPRSHKRGKHIERKYHLIREIVHRGDVIVT+IA HNV
Subjt: GCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
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| A0A5A7TWB9 Gag/pol protein | 4.5e-248 | 65.99 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
++DMV+SMMSYAHLP+SFWGY V+TAVYILN VPSKSVSETP KLW GRK GYPK TRGG FYDPK++
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTI----AKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDP
KVFVSTNATFLEEDHIR+HKPRSKIVL+EL +V + S TRV S + Q L PRRSGRV P RYM L+ET VI D D EDP
Subjt: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTI----AKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDP
Query: STYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIV
T+ +AM D DKD+W+ AM+ ++ESMYFN VWDLVD+PDGVKPIGCKWIYKRKRG DGKVQT KARLVAKGYTQVEGVDYEETFSPVAM+KSI ILL+I
Subjt: STYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIV
Query: AYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDI
AY+DYE+WQMDVKT FLNGNLEE IYM +P+GFI GQ+ K GLK VLYVDDI
Subjt: AYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDI
Query: LLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYA
LLIGN++G LTDIK WLATQF MKDLG+AQFVLGIQI R+RKNK LALSQ SYIDK+++++ MQ+SK+GLLPFRH V SKE+CPKTPQ VE+MR PYA
Subjt: LLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYA
Query: SVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQ
S VGSLMYAMLCTRP IC+AV +VSRYQSNPG HWT VKTILKYLRRTR+YMLVYG+KDL LTGYTDSDFQTD+DSRKSTSG +KQ
Subjt: SVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQ
Query: GCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
GCIADSTMEAEYVAACEAAKE VWLR F+++ EVVPNM ITLYCDNSGAV NSREPRSHKRGKHIERKYHLIREIVHRGDVIVT+IA HNV
Subjt: GCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
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| A0A5A7TZD0 Gag/pol protein | 4.8e-258 | 67.68 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
++DMV+SMMSYA LPSSFWGY VETAV+ILNNVPSKSVSETPF+LW+GRK GYPKETRGGLF+DP+E+
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
+VFVSTNATFLEEDH+R+HKPRSK+VLSE +V ++ S+RV +T S Q PSQ L MPRRSGRV++QP+RY+GL+ETQVVIPDD EDP +Y
Subjt: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
Query: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
QAM D DKD+WV AMD +MESMYFN VW+LVD P+GVKPIGCKWIYKRKR GKVQT KARLVAKGYTQ EGVDYEETFSPVAM+KSI ILL+I +YD
Subjt: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
Query: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
YE+WQMDVKT FLNGNLEE+I+M +P+GFI GQ+ K GLK VLYVDDILLIG
Subjt: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
Query: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
N+VGYLTD+K WLA QF MKDLG+AQ+VLGIQI+R+RKNKTLALSQ +YIDK+L+R+ MQ+SKKGLLPFRH VH SKE+ PKTPQ VEDMRR PYAS VG
Subjt: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
Query: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIA
SLMYAMLCTRP IC+AV +VSRYQSNPG +HWT VK +LKYLRRTR+YMLVYGAKDL LTGYTDSDFQTDKDSRKSTSG +KQGCIA
Subjt: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIA
Query: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
DSTMEAEYVAACEAAKE VWLRKF+ + EVVPNM L ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREIV RGDVIVTKIA EHN+
Subjt: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
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| A0A5A7UYE8 Gag/pol protein | 4.8e-258 | 67.68 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
++DMV+SMMSYA LPSSFWGY VETAV+ILNNVPSKSVSETPF+LW+GRK GYPKETRGGLF+DP+E+
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRK---------------------------------GYPKETRGGLFYDPKED
Query: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
+VFVSTNATFLEEDH+R+HKPRSK+VLSE +V ++ S+RV +T S Q PSQ L MPRRSGRV++QP+RY+GL+ETQVVIPDD EDP +Y
Subjt: KVFVSTNATFLEEDHIRDHKPRSKIVLSELDGTIAKVANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYS
Query: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
QAM D DKD+WV AMD +MESMYFN VW+LVD P+GVKPIGCKWIYKRKR GKVQT KARLVAKGYTQ EGVDYEETFSPVAM+KSI ILL+I +YD
Subjt: QAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYD
Query: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
YE+WQMDVKT FLNGNLEE+I+M +P+GFI GQ+ K GLK VLYVDDILLIG
Subjt: YEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKSK------RFAGLK----------------------------------------VLYVDDILLIG
Query: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
N+VGYLTD+K WLA QF MKDLG+AQ+VLGIQI+R+RKNKTLALSQ +YIDK+L+R+ MQ+SKKGLLPFRH VH SKE+ PKTPQ VEDMRR PYAS VG
Subjt: NEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVG
Query: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIA
SLMYAMLCTRP IC+AV +VSRYQSNPG +HWT VK +LKYLRRTR+YMLVYGAKDL LTGYTDSDFQTDKDSRKSTSG +KQGCIA
Subjt: SLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIA
Query: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
DSTMEAEYVAACEAAKE VWLRKF+ + EVVPNM L ITLYCDNSGAV NS+EPRSHKRGKHIERKYHLIREIV RGDVIVTKIA EHN+
Subjt: DSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
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| A0A5A7V6N0 Gag/pol protein | 1.4e-249 | 67.77 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRKGYPKETRGGLFYDPKEDKVFVSTNATFLEEDHIRDHKPRSKIVLSELDGT
++DMV+SMMSYAHLP+SFWGY V+TAVYILN VPSKSVSETP KLW G KGYPK TRGG FYDPK++KVFVSTNATFLEEDHIR+HKPRSKIVL+EL
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVSETPFKLWKGRKGYPKETRGGLFYDPKEDKVFVSTNATFLEEDHIRDHKPRSKIVLSELDGT
Query: IAK----VANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWD
K V + S TRV S + Q L PR+SGRV P RYM L+ET VI D D EDP T+ +AM D DKD+W+ AM+ ++ESMYFN VWD
Subjt: IAK----VANKTSTSTRVFDTRLSNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWD
Query: LVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGF
L+D+PDGVKPIGCKWIYKRKRG DGKVQT KARLVAKGYTQVEGVDYEETFSPVAM+KSI ILL+I AY+DYE+WQMDVKT FLNGNLEE IYM +P+GF
Subjt: LVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGF
Query: IELGQKSK------RFAGLK----------------------------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVL
I GQ+ K GLK VLYVDDILLIGN++G LTDIK WLATQF MKDLG+AQFVL
Subjt: IELGQKSK------RFAGLK----------------------------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVL
Query: GIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGH
GIQI R+RKNK LALSQ SYIDK+++++ MQ+SK+GLLPFRH V SKE+CPKTPQ VE+MR PYAS VGSLMYAMLCTRP IC+AV +VSRYQSNPG
Subjt: GIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGH
Query: EHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFE
HWT VKTILKYLRR R+Y LVYG+KDL LTGYTDSDFQTD+DSRKST G +KQGCIADSTMEAEYV ACEAAKE VWLR F+++ E
Subjt: EHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTDKDSRKSTSG--------------VKQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFE
Query: VVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNVLILLQR
VVPNM ITLYCDNSGAV NSREPRSHKRGKHIERKYHLIREIVHRGDVIVT+IA HN+ L +
Subjt: VVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNVLILLQR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.8e-60 | 24.88 | Show/hide |
Query: DMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSV---SETPFKLWKGRKGYPKETR-------------GGLF-----------YDPKEDKVFVSTNA
+ ++M+S A L SFWG V TA Y++N +PS+++ S+TP+++W +K Y K R G F Y+P K++ + N
Subjt: DMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSV---SETPFKLWKGRKGYPKETR-------------GGLF-----------YDPKEDKVFVSTNA
Query: TFL--------------------EEDHIRDHKPRS---------KIVLSEL--------------DGTIAKVANKTSTSTRVFDTRLSNQERPSQELS--
F+ E ++D K KI+ +E D ++ N + S ++ T N+ + +
Subjt: TFL--------------------EEDHIRDHKPRS---------KIVLSEL--------------DGTIAKVANKTSTSTRVFDTRLSNQERPSQELS--
Query: ------------------------------------------------------------MPRRSGRVITQP-----DRYMGLSETQVVIPDDDCEDPST
+ RRS R+ T+P + L++ + + P++
Subjt: ------------------------------------------------------------MPRRSGRVITQP-----DRYMGLSETQVVIPDDDCEDPST
Query: YSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAY
+ + DK W A++ ++ + N W + +P+ + +W++ K G KARLVA+G+TQ +DYEETF+PVA + S +L++V
Subjt: YSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAY
Query: YDYEVWQMDVKTNFLNGNLEENIYMGKPKGFI----ELGQKSKRFAGLK------------------------------------------VLYVDDILL
Y+ +V QMDVKT FLNG L+E IYM P+G + + +K GLK +LYVDD+++
Subjt: YDYEVWQMDVKTNFLNGNLEENIYMGKPKGFI----ELGQKSKRFAGLK------------------------------------------VLYVDDILL
Query: IGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHF----SKEKCPKTPQGVEDMRRFP
++ + + K +L +F M DL + + +GI+I + + LSQ++Y+ K+L +F M++ P ++++ S E C P
Subjt: IGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFRHRVHF----SKEKCPKTPQGVEDMRRFP
Query: YASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYG---AKDLTLTGYTDSDFQTDKDSRKSTSGV-----------
S++G LMY MLCTRP + AV ++SRY S E W +K +L+YL+ T + L++ A + + GY DSD+ + RKST+G
Subjt: YASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYG---AKDLTLTGYTDSDFQTDKDSRKSTSGV-----------
Query: ----KQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
+Q +A S+ EAEY+A EA +E +WL+ + + + + I +Y DN G + + P HKR KHI+ KYH RE V + + I E+ +
Subjt: ----KQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNV
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| P0CV72 Secreted RxLR effector protein 161 | 2.4e-17 | 39.85 | Show/hide |
Query: MRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVY-GAKDLTLTGYTDSDFQTDKDSRKSTSGV--------
M+ PY S VG++MY M+ TRP + AV ++S++ S+P HW +K +L+YL+ T+ Y L + A L GY+D+D+ D +SR+STSG
Subjt: MRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVY-GAKDLTLTGYTDSDFQTDKDSRKSTSGV--------
Query: ------KQGCIADSTMEAEYVAACEAAKEIVWL
KQ +A S+ E EY+A EA +E VWL
Subjt: ------KQGCIADSTMEAEYVAACEAAKEIVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.6e-101 | 34.11 | Show/hide |
Query: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVS-ETPFKLWKGRK-----------------------------------GYPKETRGGLFYDP
+++ V+SM+ A LP SFWG V+TA Y++N PS ++ E P ++W ++ GY E G +DP
Subjt: MMDMVQSMMSYAHLPSSFWGYTVETAVYILNNVPSKSVS-ETPFKLWKGRK-----------------------------------GYPKETRGGLFYDP
Query: KEDKVFVSTNATFLEEDHIRDHKPRSKIVLSELDG---TIAKVANKTSTSTRVFDTRLSNQERPS-------------QELSMP----------RRSGRV
+ KV S + F E +R S+ V + + TI +N +++ D E+P +E+ P RRS R
Subjt: KEDKVFVSTNATFLEEDHIRDHKPRSKIVLSELDG---TIAKVANKTSTSTRVFDTRLSNQERPS-------------QELSMP----------RRSGRV
Query: ITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQV
+ RY T+ V+ DD +P + + + +K++ + AM ++MES+ N + LV+ P G +P+ CKW++K K+ D K+ KARLV KG+ Q
Subjt: ITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDGVKPIGCKWIYKRKRGVDGKVQTVKARLVAKGYTQV
Query: EGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQK------SKRFAGLK----------------------
+G+D++E FSPV + SI +L++ A D EV Q+DVKT FL+G+LEE IYM +P+GF G+K +K GLK
Subjt: EGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQK------SKRFAGLK----------------------
Query: -------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFR
+LYVDD+L++G + G + +K L+ F MKDLG AQ +LG++IVR R ++ L LSQ YI++VL RF M+++K P
Subjt: -------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDKVLLRFKMQDSKKGLLPFR
Query: HRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTD
+ SK+ CP T + +M + PY+S VGSLMYAM+CTRP I AV +VSR+ NPG EHW VK IL+YLR T L +G D L GYTD+D D
Subjt: HRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNYMLVYGAKDLTLTGYTDSDFQTD
Query: KDSRKSTSGV--------------KQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLI
D+RKS++G Q C+A ST EAEY+AA E KE++WL++F+ + + +YCD+ A++ S+ H R KHI+ +YH I
Subjt: KDSRKSTSGV--------------KQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENSREPRSHKRGKHIERKYHLI
Query: REIVHRGDVIVTKIAQEHNVLILLQRL
RE+V + V KI+ N +L ++
Subjt: REIVHRGDVIVTKIAQEHNVLILLQRL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.4e-51 | 30.47 | Show/hide |
Query: SNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDG-VKPIGCKWIYKRKRG
+N + P SM R+ I +P+ L+ + +P T QA+ D ++W AM ++ + N WDLV P V +GC+WI+ +K
Subjt: SNQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLVDKPDG-VKPIGCKWIYKRKRG
Query: VDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKS------KRFAGLK--
DG + KARLVAKGY Q G+DY ETFSPV SI I+L + + + Q+DV FL G L +++YM +P GFI+ + + K GLK
Subjt: VDGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKS------KRFAGLK--
Query: --------------------------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYID
++YVDDIL+ GN+ L + + L+ +F +KD + + LGI+ R L LSQ YI
Subjt: --------------------------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYID
Query: KVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNY-ML
+L R M +K P S K E Y +VGSL Y + TRP I +AV +S++ P EH +K IL+YL T N+ +
Subjt: KVLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNY-ML
Query: VYGAKDLTLTGYTDSDFQTDKDSRKSTSGV--------------KQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVEN
+ L+L Y+D+D+ DKD ST+G KQ + S+ EAEY + + E+ W+ + + + +YCDN GA
Subjt: VYGAKDLTLTGYTDSDFQTDKDSRKSTSGV--------------KQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVEN
Query: SREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIA
P H R KHI YH IR V G + V ++
Subjt: SREPRSHKRGKHIERKYHLIREIVHRGDVIVTKIA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.5e-51 | 29.45 | Show/hide |
Query: NQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLV-DKPDGVKPIGCKWIYKRKRGV
N + P SM R+ I +P++ + + +P T QAM D D+W AM ++ + N WDLV P V +GC+WI+ +K
Subjt: NQERPSQELSMPRRSGRVITQPDRYMGLSETQVVIPDDDCEDPSTYSQAMVDKDKDKWVIAMDQKMESMYFNFVWDLV-DKPDGVKPIGCKWIYKRKRGV
Query: DGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKS------KRFAGLK---
DG + KARLVAKGY Q G+DY ETFSPV SI I+L + + + Q+DV FL G L + +YM +P GF++ + K GLK
Subjt: DGKVQTVKARLVAKGYTQVEGVDYEETFSPVAMVKSICILLAIVAYYDYEVWQMDVKTNFLNGNLEENIYMGKPKGFIELGQKS------KRFAGLK---
Query: -------------------------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDK
++YVDDIL+ GN+ L + L+ +F +K+ + LGI+ R + L LSQ Y
Subjt: -------------------------------------VLYVDDILLIGNEVGYLTDIKNWLATQFLMKDLGKAQFVLGIQIVRNRKNKTLALSQTSYIDK
Query: VLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNY-MLV
+L R M +K P + K P E Y +VGSL Y + TRP + +AV +S+Y P +HW +K +L+YL T ++ + +
Subjt: VLLRFKMQDSKKGLLPFRHRVHFSKEKCPKTPQGVEDMRRFPYASVVGSLMYAMLCTRPGICFAVVMVSRYQSNPGHEHWTTVKTILKYLRRTRNY-MLV
Query: YGAKDLTLTGYTDSDFQTDKDSRKSTSGV--------------KQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENS
L+L Y+D+D+ D D ST+G KQ + S+ EAEY + + E+ W+ + + + +YCDN GA
Subjt: YGAKDLTLTGYTDSDFQTDKDSRKSTSGV--------------KQGCIADSTMEAEYVAACEAAKEIVWLRKFMLNFEVVPNMILFITLYCDNSGAVENS
Query: REPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNVL-ILLQRLSRL
P H R KHI YH IR V G + V ++ + L + LSR+
Subjt: REPRSHKRGKHIERKYHLIREIVHRGDVIVTKIAQEHNVL-ILLQRLSRL
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