; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018423 (gene) of Snake gourd v1 genome

Gene IDTan0018423
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein L35
Genome locationLG08:73901479..73903481
RNA-Seq ExpressionTan0018423
SyntenyTan0018423
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650972.1 hypothetical protein Csa_002588 [Cucumis sativus]1.8e-3657.8Show/hide
Query:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY
        MA+GH  RR+++I+V AKI NLYIKLKAT+KLP GKFQRLLK+DKLLI +DSKS SRIL+Q+RRTLKSR +SFVKKH   RRSK             +P+
Subjt:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY

Query:  LIAETENRSWRLGRVELSCVAAFGVGLGYL------------SAFPSLSSFILVCLILFVLWLHKSKFLWAML
          AE+  RSW +G +E  CVAAFGVGLGY+            +  PS SS I V L +FVLWL K K+LWAML
Subjt:  LIAETENRSWRLGRVELSCVAAFGVGLGYL------------SAFPSLSSFILVCLILFVLWLHKSKFLWAML

KAG6596309.1 hypothetical protein SDJN03_09489, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5370.69Show/hide
Query:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY
        MALGH  RR+W+ITVHAK++NLYIK KATVK P GKF+ LL +DKLL GLDSKSESRILVQQ RTLKSR ISFVKKHF RRRSKT VGFKMPD     PY
Subjt:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY

Query:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSA-------------FPSLSSFILVCLILFVLWLHKSKFLWAML
        L+ ETE +SWRL R E SC A FGVGLGYL A              PSLSSF+LVCL+LFVL  HKSKFLWAML
Subjt:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSA-------------FPSLSSFILVCLILFVLWLHKSKFLWAML

KAG7027863.1 hypothetical protein SDJN02_09040 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-5370.69Show/hide
Query:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY
        MALGH  RR+W+ITVHAK++NLYIK KATVK P GKF+ LL +DKLL GLDSKSESRILVQQ RTLKSR ISFVKKHF RRRSKT VGFKMPD     PY
Subjt:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY

Query:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSA-------------FPSLSSFILVCLILFVLWLHKSKFLWAML
        L+ ETE +SWRL R E SC A FGVGLGYL A              PSLSSF+LVCL+LFVL  HKSKFLWAML
Subjt:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSA-------------FPSLSSFILVCLILFVLWLHKSKFLWAML

XP_023540743.1 uncharacterized protein LOC111801019 [Cucurbita pepo subsp. pepo]7.4e-5470.11Show/hide
Query:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY
        MALGH  RR+W+ITVHAK+++LYIK KATVK P GKF+ LL +DKLL+GLDSKSESRILVQQ RTLKSR ISFVKKHF RRRSKT VGFKMPD     PY
Subjt:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY

Query:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSA-------------FPSLSSFILVCLILFVLWLHKSKFLWAML
        L+ ETE +SWRLGR E SC A FGVGLGYL A              PSLSSF+LVC++LFVL  HKSKFLWAML
Subjt:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSA-------------FPSLSSFILVCLILFVLWLHKSKFLWAML

XP_038906422.1 uncharacterized protein LOC120092221 [Benincasa hispida]3.7e-3760.23Show/hide
Query:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY
        MALG   RR+++ITVHAKI NLYIKLKAT+K P GK QRLLK+DKLLIG DSKSES ILVQ+RRTLKSR +SFVKKH    RS      KMP        
Subjt:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY

Query:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSAF-----------PSLSS--FILVCLILFVLWLHKSK--FLWAML
          AE+EN+SW +GR+EL CVA FGVGLGYL A            PS SS  ++ +CL+LFVLWLHK K  +LWA+L
Subjt:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSAF-----------PSLSS--FILVCLILFVLWLHKSK--FLWAML

TrEMBL top hitse value%identityAlignment
A0A0A0LCL9 50S ribosomal protein L351.0e-2956.41Show/hide
Query:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY
        MA+GH  RR+++I+V AKI NLYIKLKAT+KLP GKFQRLLK+DKLLI +DSKS SRIL+Q+RRTLKSR +SFVKKH   RRSK             +P+
Subjt:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY

Query:  LIAETENRSWRLGRVELSCVAAFGVGLGYL------------SAFPSLSSFILVCL
          AE+  RSW +G +E  CVAAFGVGLGY+            +  PS SS I V L
Subjt:  LIAETENRSWRLGRVELSCVAAFGVGLGYL------------SAFPSLSSFILVCL

A0A1S3B4Y8 uncharacterized protein LOC1034862299.5e-3153.49Show/hide
Query:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY
        MA+GH  RR+++I+VHAKI NLYIKLKAT+KLP GKFQRLLK+DKLLI +DSKSESR+LVQ+RRTLKSR +SFVKKH  R RSK              P+
Subjt:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY

Query:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSAF-----------PSLSSFILVCLILFVLWLHKSKFLWAML
          +E++ +SW +G          GVG GYL A             S SS I V L +FV+WL K K+LWA+L
Subjt:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSAF-----------PSLSSFILVCLILFVLWLHKSKFLWAML

A0A5A7TM08 RING-H2 finger protein ATL74-like2.0e-2557.58Show/hide
Query:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY
        MA+GH  RR+++I+VHAKI NLYIKLKAT+KLP GKFQRLLK+DKLLI +DSKSESR+LVQ+RRTLKSR +SFVKKH  R RS      K+P +   Y Y
Subjt:  MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPY

Query:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSA
                 W +G          GVG GYL A
Subjt:  LIAETENRSWRLGRVELSCVAAFGVGLGYLSA

A0A5D3DNQ2 50S ribosomal protein L351.1e-2353.57Show/hide
Query:  GHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPYLIA
        GH  RR+++I+VHAKI NLYIKLKAT+KLP GKFQRLLK+DKLLI +DSKSESR+LVQ+RRTLKSR +SFVKKH  R RSK              P+  +
Subjt:  GHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPYLIA

Query:  ETENRSWRLGRVELSCVAAFGVGLGYLSAFPSLSSFILVC
        E++ +SW +G          GVG GYL A  +       C
Subjt:  ETENRSWRLGRVELSCVAAFGVGLGYLSAFPSLSSFILVC

A0A6P6A826 uncharacterized protein LOC111307197 isoform X28.9e-0531.67Show/hide
Query:  RRRAWEITVHAKISNLYIKLKATVKLPLGKFQR---LLKVDKLLIGLDSKSESRILV--QQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPYL
        ++++W++ + A+  N   KLKAT  LP GKFQR   LL++ K+++ L  +  S + +  QQ+RTLKS  +  ++K    RR+KT++  + PD   +   L
Subjt:  RRRAWEITVHAKISNLYIKLKATVKLPLGKFQR---LLKVDKLLIGLDSKSESRILV--QQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPYL

Query:  IAETENRSWRLGRVELSCVA
              +S   G + ++ +A
Subjt:  IAETENRSWRLGRVELSCVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTAGGTCACCGGCGGCGGCGGGCATGGGAAATCACGGTTCACGCCAAGATCAGTAACCTTTATATCAAGCTCAAGGCCACCGTGAAACTTCCGTTAGGAAAATT
CCAACGCCTCCTTAAGGTGGACAAATTACTCATCGGACTGGATTCCAAATCTGAATCTCGGATCCTCGTTCAGCAACGGCGGACTTTAAAATCCCGAACAATCAGCTTCG
TCAAGAAACATTTCTGGCGTCGCCGATCTAAAACCAGCGTCGGCTTCAAAATGCCAGATGCCTCGTGCTCATATCCATACCTAATTGCTGAAACTGAAAATCGATCTTGG
CGTCTGGGCCGTGTGGAATTAAGTTGCGTGGCTGCTTTTGGTGTTGGACTGGGTTATCTATCTGCTTTTCCCAGCTTGAGTTCCTTTATATTGGTGTGCCTGATTTTATT
TGTTTTATGGCTCCACAAATCCAAGTTCCTTTGGGCAATGCTTTGTGGTTTCTCTCTTACCGCTAGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTAGGTCACCGGCGGCGGCGGGCATGGGAAATCACGGTTCACGCCAAGATCAGTAACCTTTATATCAAGCTCAAGGCCACCGTGAAACTTCCGTTAGGAAAATT
CCAACGCCTCCTTAAGGTGGACAAATTACTCATCGGACTGGATTCCAAATCTGAATCTCGGATCCTCGTTCAGCAACGGCGGACTTTAAAATCCCGAACAATCAGCTTCG
TCAAGAAACATTTCTGGCGTCGCCGATCTAAAACCAGCGTCGGCTTCAAAATGCCAGATGCCTCGTGCTCATATCCATACCTAATTGCTGAAACTGAAAATCGATCTTGG
CGTCTGGGCCGTGTGGAATTAAGTTGCGTGGCTGCTTTTGGTGTTGGACTGGGTTATCTATCTGCTTTTCCCAGCTTGAGTTCCTTTATATTGGTGTGCCTGATTTTATT
TGTTTTATGGCTCCACAAATCCAAGTTCCTTTGGGCAATGCTTTGTGGTTTCTCTCTTACCGCTAGAAATTGATAGATGTCTAGAACTTTTAGAGCCGGTTTGGGCAATG
CTTCGTGGACCTCTTTCTTTTCATTCTTATATCTTATAACCTCATTCTTTTCATTTTTCCTTACAAATGTTTGACATCTTCTGGTGTCCAAACTACTGGTCCAAAAAGAG
TTTAATTCTACCTGGATCGGTATCATTTATACGTCGACATTCTTCCATAGATTTTGGATCAGAATCATTTCATTAATAATATCATGACCAAGATTGTGAGCAAAAATGTT
GTCAACAAATCTTTCAGTTTCATCTTTTTTCTGATATAATATAGTTGTATCATAGATGGAAGTCGCAATAGCTTCTCTTGAATCATGTCAGGCTCACCCCTCATTGCTAC
TATTTCCTTATCGGTAACATTCAATCGTTCTTCCAGCCGTTGCGTCATCCTTCGATCCTTCGAGTCCTCCCCAAGTTGGTTGCTCTGCCAATATATTAGGATTTTCCCCT
TTTATATTGATAAACAGAGAGGATCAAAAGAAAATACAAAACTTCCAGCGGATGCTAATTCCCATCTGCCATAGGACCCACAGCAACGCTCCCACTTGCCCCTCCCTGCT
CCTCTAACGAACTTGACGCCCTTTTTCCCTTTTTACCCCTTCTAAAATAATGGGCCTTGATTGGGGCCTAACACATCCTTCCAAGAATAATGAGCACACAATCTAGTAAC
CACTTTAATCTTATCAAAATCAACATTCACAACTTCATTTTTTAACCCAAAAATGAGAAGGTACCGAGAAACTTAAGAAGACTTGGAAGAAGAACAGACCGGGGTGGAGG
CTTTTCAGACTGCTCACAAGCGACCTTTGCTTCTAAATTGGAAGAGGAATGCTTTTCAGTCGAAGCTACATCAGACACTATAATGGACTTACTCGAACCATCTCCATTCA
AGCTGACAAAACCCAAGTACGCAGATAAACCTAAGCAATTCTCTAGTTCCCTGAAGAGAAGCCAACGTTTTTTAAATTAACCTGGATCTCTAATGAACTTTCTTCCACTA
ATGCAATCCACCACTCTACCCTATTGAATCTGCCGCTTGGCCGGACCGATTGTTCTGGAATCACTTTTATGCTTCAACAGAAATGGCAAGTGAGTCGGATTATGCAAGAG
CTTGACAAAGGCACTTTCGAACGAGACAAGATGCTGAGGCACGACCTTGAGAGCTAATTGGATGTTAGCATCCTCAACATATAACGAACATTCTAACCTCCATGATAAAG
AAACAAAACCACCAGAGAATGACCGTGAGGACTGCTGAAAAACTGGCTAATGAAGTCTTAAAACGACGGCCGTAGGAGAAGAAACCAACGACTGAAGGCTCGGGGAAGGA
GAGAAGAGAG
Protein sequenceShow/hide protein sequence
MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPYLIAETENRSW
RLGRVELSCVAAFGVGLGYLSAFPSLSSFILVCLILFVLWLHKSKFLWAMLCGFSLTARN