; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018472 (gene) of Snake gourd v1 genome

Gene IDTan0018472
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG10:5460142..5461036
RNA-Seq ExpressionTan0018472
SyntenyTan0018472
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049241.1 hypothetical protein E6C27_scaffold171G004810 [Cucumis melo var. makuwa]6.1e-8971.89Show/hide
Query:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSN
        MA LLQ PLFALFFL +FS S + PWNSS F KSG NPS D++L  S E+S RPS R++TIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASF G SN
Subjt:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSN

Query:  PCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQ
        PCSG S RPP    + H QASASREPQMTLN+YL  P     PSLRS+SG AID+AH LPLHPLLA+PPP PRT+  + +N QQNQA A    QRRQGNQ
Subjt:  PCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQ

Query:  VRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLSL
        +RWNNG  R  GG  A+EQQPPQ+VIDL++EENDCSSDGSEGLDLTLSL
Subjt:  VRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLSL

KAG6582389.1 hypothetical protein SDJN03_22391, partial [Cucurbita argyrosperma subsp. sororia]8.6e-1936.76Show/hide
Query:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQN-----ELASF
        MA LL+AP              +FPW SS F+KS WNPSF ELL  S +TS RP  RK+TIFGAPCGLCGQ I  SE LNHH     L +      + S 
Subjt:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQN-----ELASF

Query:  GGRSNPCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQR
          +    +   Q  P W +   S+         T N+ L         S + +   A+D+AH LPLHPLLAQPPP   T                     
Subjt:  GGRSNPCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQR

Query:  RQGNQVRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLS
           N++R   G                       N EN+CSS GSE LDLTLS
Subjt:  RQGNQVRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLS

KAG6597359.1 hypothetical protein SDJN03_10539, partial [Cucurbita argyrosperma subsp. sororia]5.7e-8772.29Show/hide
Query:  LLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSNPC
        L L   L  LFFL AFS SLAFPW+SS +EKSGWNPS +ELL  SGETS RP RRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQN+LAS+G R  P 
Subjt:  LLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSNPC

Query:  SGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQVR
        S SSQRPP+WT+Y H QASASREPQ+TLN  L  PPPRQ  SLRSY    +D+AHLLPLHPLLAQPPPP R T A+G+    N+ AA   GQR QGNQ +
Subjt:  SGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQVR

Query:  WNNGGARAAGGVSAAEQ-QPPQEVIDLNN-EENDCSSDGSEGLDLTLSL
         NNGGAR     SAAEQ QP QEVIDLN+ EENDCSSDGS+GLDLTLSL
Subjt:  WNNGGARAAGGVSAAEQ-QPPQEVIDLNN-EENDCSSDGSEGLDLTLSL

KGN56847.1 hypothetical protein Csa_010766 [Cucumis sativus]2.5e-9574.7Show/hide
Query:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSN
        M  LLQ PLFALFFL +FS SL+FP NSS F +S  NPS + +L  S E+SGRPSRRK+TIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASF G SN
Subjt:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSN

Query:  PCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQ
        P SG SQRPPLW+NY H QASASREPQMTLN+YL  P     PSLRSYSG AID+AH LPLHPLLAQPPP PRT+ A+ +N QQNQA A   G RRQGNQ
Subjt:  PCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQ

Query:  VRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLSL
        V+WNNGG R  GG  A+E+QPPQ+VIDLN+EENDCSSD SEGLDLTLSL
Subjt:  VRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLSL

TrEMBL top hitse value%identityAlignment
A0A0A0L892 C2H2-type domain-containing protein1.2e-9574.7Show/hide
Query:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSN
        M  LLQ PLFALFFL +FS SL+FP NSS F +S  NPS + +L  S E+SGRPSRRK+TIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASF G SN
Subjt:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSN

Query:  PCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQ
        P SG SQRPPLW+NY H QASASREPQMTLN+YL  P     PSLRSYSG AID+AH LPLHPLLAQPPP PRT+ A+ +N QQNQA A   G RRQGNQ
Subjt:  PCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQ

Query:  VRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLSL
        V+WNNGG R  GG  A+E+QPPQ+VIDLN+EENDCSSD SEGLDLTLSL
Subjt:  VRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLSL

A0A5A7U6I9 C2H2-type domain-containing protein2.9e-8971.89Show/hide
Query:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSN
        MA LLQ PLFALFFL +FS S + PWNSS F KSG NPS D++L  S E+S RPS R++TIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASF G SN
Subjt:  MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSN

Query:  PCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQ
        PCSG S RPP    + H QASASREPQMTLN+YL  P     PSLRS+SG AID+AH LPLHPLLA+PPP PRT+  + +N QQNQA A    QRRQGNQ
Subjt:  PCSGSSQRPPLWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQ

Query:  VRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLSL
        +RWNNG  R  GG  A+EQQPPQ+VIDL++EENDCSSDGSEGLDLTLSL
Subjt:  VRWNNGGARAAGGVSAAEQQPPQEVIDLNNEENDCSSDGSEGLDLTLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTCCTCCTTCAAGCTCCTCTGTTTGCTCTGTTTTTCCTCGCAGCCTTCTCTGCTTCTCTGGCTTTCCCTTGGAATTCCTCCCTCTTTGAGAAATCTGGCTGGAA
CCCATCATTCGATGAGCTGTTGTTGAACTCCGGCGAGACTTCCGGCCGGCCGTCTCGCCGGAAAAGCACAATTTTCGGTGCCCCTTGTGGGCTCTGTGGCCAAGTGATTT
TTGGCTCTGAAGCTCTCAATCACCATTACAATTACCATTTCTTGCAGAACGAGCTTGCTTCTTTTGGGGGCCGCTCAAATCCTTGCTCCGGCAGCTCTCAGCGGCCGCCG
TTGTGGACCAATTATTTACATAGCCAAGCCTCTGCTTCTCGAGAACCCCAAATGACCCTTAACGAGTATTTGGCGAGGCCACCGCCACGGCAGCAGCCGTCTCTGAGAAG
CTACTCCGGCGACGCCATCGACGTGGCCCACCTGCTTCCGCTTCATCCGTTGCTGGCCCAACCGCCGCCACCGCCGAGGACCACCGCCGCCAGCGGTATTAACGTTCAAC
AGAATCAGGCTGCAGCAGGGCAGTTGGGGCAGAGGAGGCAGGGGAACCAAGTCCGATGGAATAACGGCGGCGCAAGAGCGGCCGGTGGCGTGTCGGCGGCAGAGCAGCAG
CCGCCACAAGAAGTGATTGATCTCAATAATGAGGAGAATGATTGTAGCTCTGATGGTTCAGAAGGCTTGGATTTGACATTGAGTCTCTGA
mRNA sequenceShow/hide mRNA sequence
TCAAAACTAGGCTTCTCTATTCCCCCTTTCCCCCAATGCCTTTTAGAATTCTTATTTCCCACCTCTATAAATTTCACTTCTCACCATCTCCAAAATCAAAACCAAAACCA
TCTCCATTTCAATTTCAATTTTTCCCATTTCTGGCATGGCCCTCCTCCTTCAAGCTCCTCTGTTTGCTCTGTTTTTCCTCGCAGCCTTCTCTGCTTCTCTGGCTTTCCCT
TGGAATTCCTCCCTCTTTGAGAAATCTGGCTGGAACCCATCATTCGATGAGCTGTTGTTGAACTCCGGCGAGACTTCCGGCCGGCCGTCTCGCCGGAAAAGCACAATTTT
CGGTGCCCCTTGTGGGCTCTGTGGCCAAGTGATTTTTGGCTCTGAAGCTCTCAATCACCATTACAATTACCATTTCTTGCAGAACGAGCTTGCTTCTTTTGGGGGCCGCT
CAAATCCTTGCTCCGGCAGCTCTCAGCGGCCGCCGTTGTGGACCAATTATTTACATAGCCAAGCCTCTGCTTCTCGAGAACCCCAAATGACCCTTAACGAGTATTTGGCG
AGGCCACCGCCACGGCAGCAGCCGTCTCTGAGAAGCTACTCCGGCGACGCCATCGACGTGGCCCACCTGCTTCCGCTTCATCCGTTGCTGGCCCAACCGCCGCCACCGCC
GAGGACCACCGCCGCCAGCGGTATTAACGTTCAACAGAATCAGGCTGCAGCAGGGCAGTTGGGGCAGAGGAGGCAGGGGAACCAAGTCCGATGGAATAACGGCGGCGCAA
GAGCGGCCGGTGGCGTGTCGGCGGCAGAGCAGCAGCCGCCACAAGAAGTGATTGATCTCAATAATGAGGAGAATGATTGTAGCTCTGATGGTTCAGAAGGCTTGGATTTG
ACATTGAGTCTCTGA
Protein sequenceShow/hide protein sequence
MALLLQAPLFALFFLAAFSASLAFPWNSSLFEKSGWNPSFDELLLNSGETSGRPSRRKSTIFGAPCGLCGQVIFGSEALNHHYNYHFLQNELASFGGRSNPCSGSSQRPP
LWTNYLHSQASASREPQMTLNEYLARPPPRQQPSLRSYSGDAIDVAHLLPLHPLLAQPPPPPRTTAASGINVQQNQAAAGQLGQRRQGNQVRWNNGGARAAGGVSAAEQQ
PPQEVIDLNNEENDCSSDGSEGLDLTLSL