; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0018481 (gene) of Snake gourd v1 genome

Gene IDTan0018481
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box protein
Genome locationLG08:7590204..7592527
RNA-Seq ExpressionTan0018481
SyntenyTan0018481
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586049.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]3.0e-15989.25Show/hide
Query:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSES   SPAWAELTHECLTNV SRLT+EQRWRGPMLVCK W  AATDPSL S FDLEP FDS PTESPAWW+PQFETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS

Query:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN
        ++RIRHCSDSSLDCVA+RCPNLEVLSIKSCPNVTDRSMAKIA+GCQKLREVDISYCHEISNISLALIGKHC NIKTLKRNFFNNLD SQHMG VP+SYLN
Subjt:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN

Query:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF
        ACPQ+VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGC NLKYLDLFGC+NLTSRDI NATS LENLE+RKP+F IPR VFH+ERYGHWRLYDERF
Subjt:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF

Query:  QTDIFRI
        QTD FR+
Subjt:  QTDIFRI

XP_022937978.1 F-box protein SKIP1-like [Cucurbita moschata]8.9e-15988.93Show/hide
Query:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSES   SPAWAELTHECLTNV SRL++EQRWRGPMLVCK W  AATDPSL S FDLEP FDS PTESPAWW+PQFETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS

Query:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN
        ++RIRHCSDSSLDCVA+RCPNLEVLSIKSCPNVTDRSMAKIA+GCQKLREVDISYCHEISNISLALIGKHC NIKTLKRNFFNNLD SQHMG VP+SYLN
Subjt:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN

Query:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF
        ACPQ+VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGC NLKYLDLFGC+NLTSRDI NATS LENLE+RKP+F IPR VFH+ERYGHWRLYDERF
Subjt:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF

Query:  QTDIFRI
        QTD FR+
Subjt:  QTDIFRI

XP_022969584.1 F-box protein SKIP1-like [Cucurbita maxima]3.4e-15888.93Show/hide
Query:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS
        MAE SSES   SPAWAELTHECLTNV SRLT+EQRWRGPMLVCK WF AATDP L S FDLEP FDSAPTESPAWW+P+FETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS

Query:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN
        ++RIRHCSDSSLDCVA+RCPNLEVLSIKSCPNVTDRSMAKIA+GC+KLREVDISYCHEISNISLALIGKHC NIKTLKRNFFNNLD SQHMG VP+SYLN
Subjt:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN

Query:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF
        ACPQ+VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGC NLKYLDLFGCVNLTSRDI NATS LENLE+RKP+F IPR VFH+ERYGHWRLYDERF
Subjt:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF

Query:  QTDIFRI
        QTD FR+
Subjt:  QTDIFRI

XP_023536859.1 F-box protein SKIP1 [Cucurbita pepo subsp. pepo]3.4e-15888.6Show/hide
Query:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSES   SPAWAELTHECLTNV SRLT+EQRWRGPMLVCK W  AATDPSL + FDLEP F+SAPTESPAWW+PQFETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS

Query:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN
        ++RIRHCSDSSLDCVA+RCPNLEVLSIKSCPNVTDRSMAKIA+GCQKLREVDISYCHEISNISLALIGKHC NIKTLKRN FNNLD SQHMG VP+SYLN
Subjt:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN

Query:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF
        ACPQ+VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGC NLKYLDLFGC+NLTSRDI NATS LENLE+RKP+F IPR VFH+ERYGHWRLYDERF
Subjt:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF

Query:  QTDIFRI
        QTD FR+
Subjt:  QTDIFRI

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]9.5e-16191.12Show/hide
Query:  MAEPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIR
        MAEP SESS +WAELTHECLTN+LSRLTIEQRWRGPMLVCKLW RAATDPSL S FDLEPRF+S PTESPAWWSP+FETKIDSMLRS VHWSLGSLSLIR
Subjt:  MAEPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIR

Query:  IRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACP
        IRHCSDSSLD VA+ CPNLEVLSIKSC NVTDRSMAKIA+GCQKLREVDISYCHEISNISLALIGKHCPNIKT+KRNFFNNLDPSQH GIVP++YLN+CP
Subjt:  IRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACP

Query:  QDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERFQTD
        QDVDSEAAAIAKFMPNLEHLEL FSKLSAKALSLICEGCP LK+LDLFGCVNLTSRDI NATSS+ENLEIRKPNFYIPRSVFH+ERYGHWRLYDERFQTD
Subjt:  QDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERFQTD

Query:  IFRI
        IFRI
Subjt:  IFRI

TrEMBL top hitse value%identityAlignment
A0A1S3BUE6 F-box protein SKIP12.6e-15689.14Show/hide
Query:  MAEPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIR
        MAEPSSESS +WAELTHECLTN+LSRLTIEQRWRGPMLVCK WFRAA DPSL S FDLEPRF+SAPTESPAWW P+FETKIDSMLRS V WSLGSLS+IR
Subjt:  MAEPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIR

Query:  IRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACP
        +RHCSDSSLD VA+ CPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FNNLDPSQH GIVP++YL+ACP
Subjt:  IRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACP

Query:  QDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERFQTD
        QDVDSEAAAIAKFM NLEHLEL FSKLSAKAL+ ICEGCPNLKYLDLFGCVNLTSRDI NATSSLENLEIRKPNFYIPRSVFH+ERY HWRLYDERFQTD
Subjt:  QDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERFQTD

Query:  IFRI
        IFRI
Subjt:  IFRI

A0A5D3BD72 F-box protein SKIP12.6e-15689.14Show/hide
Query:  MAEPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIR
        MAEPSSESS +WAELTHECLTN+LSRLTIEQRWRGPMLVCK WFRAA DPSL S FDLEPRF+SAPTESPAWW P+FETKIDSMLRS V WSLGSLS+IR
Subjt:  MAEPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIR

Query:  IRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACP
        +RHCSDSSLD VA+ CPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FNNLDPSQH GIVP++YL+ACP
Subjt:  IRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACP

Query:  QDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERFQTD
        QDVDSEAAAIAKFM NLEHLEL FSKLSAKAL+ ICEGCPNLKYLDLFGCVNLTSRDI NATSSLENLEIRKPNFYIPRSVFH+ERY HWRLYDERFQTD
Subjt:  QDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERFQTD

Query:  IFRI
        IFRI
Subjt:  IFRI

A0A6J1E082 F-box protein SKIP1-like4.0e-15787.17Show/hide
Query:  MAEPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIR
        M +PS  +SPAWAELTHECLTN++SRL++EQRWRGPMLVCKLWFRAAT  SL S+FDLEPRFDSAPTESPAWWSP+F+TKIDSMLRSV+ WS GSLSLIR
Subjt:  MAEPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIR

Query:  IRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACP
        IRHCSD SL  V +RCPNLEVLSIKSCPNVTD+SMAKIA+GCQKLREVDISYC+EIS+ SLALIG+HCPNIKTLKRNFFN LDPSQH GIVP  YLNACP
Subjt:  IRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACP

Query:  QDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERFQTD
        QDVDSEAAAIAKFMPNLEHLELCFSKL+AKALSLICEGCPNLKYLDLFGCVNLTSR+I NAT+SLENLEIRKPNFYIPRSVFH+ERYGHWRLYDERFQTD
Subjt:  QDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERFQTD

Query:  IFRI
        +FRI
Subjt:  IFRI

A0A6J1FHJ2 F-box protein SKIP1-like4.3e-15988.93Show/hide
Query:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSES   SPAWAELTHECLTNV SRL++EQRWRGPMLVCK W  AATDPSL S FDLEP FDS PTESPAWW+PQFETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS

Query:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN
        ++RIRHCSDSSLDCVA+RCPNLEVLSIKSCPNVTDRSMAKIA+GCQKLREVDISYCHEISNISLALIGKHC NIKTLKRNFFNNLD SQHMG VP+SYLN
Subjt:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN

Query:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF
        ACPQ+VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGC NLKYLDLFGC+NLTSRDI NATS LENLE+RKP+F IPR VFH+ERYGHWRLYDERF
Subjt:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF

Query:  QTDIFRI
        QTD FR+
Subjt:  QTDIFRI

A0A6J1I319 F-box protein SKIP1-like1.6e-15888.93Show/hide
Query:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS
        MAE SSES   SPAWAELTHECLTNV SRLT+EQRWRGPMLVCK WF AATDP L S FDLEP FDSAPTESPAWW+P+FETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSES---SPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLS

Query:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN
        ++RIRHCSDSSLDCVA+RCPNLEVLSIKSCPNVTDRSMAKIA+GC+KLREVDISYCHEISNISLALIGKHC NIKTLKRNFFNNLD SQHMG VP+SYLN
Subjt:  LIRIRHCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLN

Query:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF
        ACPQ+VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGC NLKYLDLFGCVNLTSRDI NATS LENLE+RKP+F IPR VFH+ERYGHWRLYDERF
Subjt:  ACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERF

Query:  QTDIFRI
        QTD FR+
Subjt:  QTDIFRI

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP11.3e-9658.8Show/hide
Query:  ESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSD
        E    W  L  E L N++SRLTI++ W GPM V K W     DP L S FDLEP FDS P ES   WSP+FE K+D MLRSVV WS G L+ IR+RHCSD
Subjt:  ESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSD

Query:  SSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDVDSE
         +L   A+RCPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++CPN++ LKRN  +    S+H+G VP  YL+ACPQD D+E
Subjt:  SSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDVDSE

Query:  AAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENL-EIRKPNFYIPRS--VFHSERYGHWRLYDERFQTDIFR
        A AI K M NLEHLE+ FS+LS K L+ ICEGCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  +ERYGHWRLYDERF     R
Subjt:  AAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENL-EIRKPNFYIPRS--VFHSERYGHWRLYDERFQTDIFR

Query:  I
        I
Subjt:  I

Q9M096 Putative F-box/LRR-repeat protein 195.2e-7752.76Show/hide
Query:  EPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIR
        E  S   P W+ELT ECL ++ SRL+ EQRW GPMLV K W  A  DP+L++ FDLE RF S P ES  WW+P+FE K+DS LRSVV  S G L+ IRIR
Subjt:  EPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIR

Query:  HCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQD
        HC++ SL   AERCPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY + I++ SL  +G+ C N+K LKRN    L PS    + P  YL   P+ 
Subjt:  HCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQD

Query:  VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENL-EIRKPNFYIPRSVFHSERYGHWR
         + EA  I K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L+NL EI KP+F  P +V    R G+ R
Subjt:  VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENL-EIRKPNFYIPRSVFHSERYGHWR

Q9M0U9 F-box protein SKIP193.4e-2031.54Show/hide
Query:  SSESSPA---------WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGS
        SS S PA         W EL  E  + +L RL   +       VC+ W R   DPS+  + D+    D              +  ++ M R  V  S G 
Subjt:  SSESSPA---------WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGS

Query:  LSLIRIRHCSD-SSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNS
        L  I I +      L+ +A R  NL  L +  C  +TD    + A+    L E+++SYC   S  SL ++G+ C N+KTLK                   
Subjt:  LSLIRIRHCSD-SSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNS

Query:  YLNACPQ-DVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL
         LN  PQ + D +A AIA+ MP L HL+LC + LS   L+ I + C NL++LDL  C N+
Subjt:  YLNACPQ-DVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL

Q9S9V8 Putative F-box/LRR-repeat protein 91.5e-2332.11Show/hide
Query:  WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSDSS-LD
        WAEL  E  +++L RL   +  +    VCK W R   DPS+  + D+  + +          S +    I+ +    V  S G L  I I +  ++S L+
Subjt:  WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSDSS-LD

Query:  CVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDV---DSEA
         +A+R  NL  L +  C  V  R + + A+    L E+DI+Y   I    L ++G+ CPN++TLK N                     C  DV   D  A
Subjt:  CVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDV---DSEA

Query:  AAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL
         AIA+ MP L HL+L  + LS   L+ I EGCP+LK L L  C+N+
Subjt:  AAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL

Q9S9V9 Putative F-box/LRR-repeat protein 235.4e-2634.16Show/hide
Query:  WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSDSSLDC
        WAEL  +  +++L RL   +  +    VCK W R   DPS+  + D++ R D A           F+  ++SM R  V  S G L  I I +   + L  
Subjt:  WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSDSSLDC

Query:  -VAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDVDSEAAAI
         +A+R  NL+ L +  C  +TD  +AK       L  +++SYC   S  SL  IG+ CPN+KTLK N    +       +  NS         D  A AI
Subjt:  -VAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDVDSEAAAI

Query:  AKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL
        A+ MP L HL+L  + L+ K L+ I +GCP+L++LDL  C N+
Subjt:  AKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein2.4e-2131.54Show/hide
Query:  SSESSPA---------WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGS
        SS S PA         W EL  E  + +L RL   +       VC+ W R   DPS+  + D+    D              +  ++ M R  V  S G 
Subjt:  SSESSPA---------WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGS

Query:  LSLIRIRHCSD-SSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNS
        L  I I +      L+ +A R  NL  L +  C  +TD    + A+    L E+++SYC   S  SL ++G+ C N+KTLK                   
Subjt:  LSLIRIRHCSD-SSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNS

Query:  YLNACPQ-DVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL
         LN  PQ + D +A AIA+ MP L HL+LC + LS   L+ I + C NL++LDL  C N+
Subjt:  YLNACPQ-DVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL

AT4G05497.1 RNI-like superfamily protein1.0e-2432.11Show/hide
Query:  WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSDSS-LD
        WAEL  E  +++L RL   +  +    VCK W R   DPS+  + D+  + +          S +    I+ +    V  S G L  I I +  ++S L+
Subjt:  WAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSDSS-LD

Query:  CVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDV---DSEA
         +A+R  NL  L +  C  V  R + + A+    L E+DI+Y   I    L ++G+ CPN++TLK N                     C  DV   D  A
Subjt:  CVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDV---DSEA

Query:  AAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL
         AIA+ MP L HL+L  + LS   L+ I EGCP+LK L L  C+N+
Subjt:  AAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNL

AT4G30640.1 RNI-like superfamily protein3.7e-7852.76Show/hide
Query:  EPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIR
        E  S   P W+ELT ECL ++ SRL+ EQRW GPMLV K W  A  DP+L++ FDLE RF S P ES  WW+P+FE K+DS LRSVV  S G L+ IRIR
Subjt:  EPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIR

Query:  HCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQD
        HC++ SL   AERCPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY + I++ SL  +G+ C N+K LKRN    L PS    + P  YL   P+ 
Subjt:  HCSDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQD

Query:  VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENL-EIRKPNFYIPRSVFHSERYGHWR
         + EA  I K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L+NL EI KP+F  P +V    R G+ R
Subjt:  VDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENL-EIRKPNFYIPRSVFHSERYGHWR

AT5G52480.1 RNI-like superfamily protein5.0e-1931.9Show/hide
Query:  DSMLRSVVHWSLGSLSLIRIRHC-SDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFN
        +++ R+ V  S G L  I I    SDS L  +AER  NL  L +  C  +TD    +  +    L E+++S    +S  S+ L G  CPN+KTL  N   
Subjt:  DSMLRSVVHWSLGSLSLIRIRHC-SDSSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFN

Query:  NLDPSQHMGIVPNSYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRS
                      YL++   D D +A AIA+ MP L HL+LC +KL+   L+ I +GCP+L++LDL  C+NL           +++L     +      
Subjt:  NLDPSQHMGIVPNSYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRS

Query:  VFHSERYGHW
              Y HW
Subjt:  VFHSERYGHW

AT5G57900.1 SKP1 interacting partner 19.3e-9858.8Show/hide
Query:  ESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSD
        E    W  L  E L N++SRLTI++ W GPM V K W     DP L S FDLEP FDS P ES   WSP+FE K+D MLRSVV WS G L+ IR+RHCSD
Subjt:  ESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSD

Query:  SSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDVDSE
         +L   A+RCPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++CPN++ LKRN  +    S+H+G VP  YL+ACPQD D+E
Subjt:  SSLDCVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDVDSE

Query:  AAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENL-EIRKPNFYIPRS--VFHSERYGHWRLYDERFQTDIFR
        A AI K M NLEHLE+ FS+LS K L+ ICEGCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  +ERYGHWRLYDERF     R
Subjt:  AAAIAKFMPNLEHLELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENL-EIRKPNFYIPRS--VFHSERYGHWRLYDERFQTDIFR

Query:  I
        I
Subjt:  I


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCGTCGTCGGAATCATCGCCGGCATGGGCCGAGCTGACGCACGAGTGCCTAACCAACGTCCTCTCTCGGCTCACCATCGAGCAGCGGTGGCGCGGCCCCAT
GCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACCGACCCCTCGCTCCACTCCCAGTTCGACCTCGAACCCAGGTTCGACTCGGCCCCCACCGAGTCGCCGGCCTGGTGGT
CACCCCAGTTCGAGACCAAGATTGATTCCATGCTTCGATCTGTCGTCCATTGGAGCCTTGGTTCTCTCTCCCTTATTCGGATCAGACACTGCTCCGATTCATCTCTCGAT
TGTGTCGCTGAAAGGTGCCCAAATCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACTGATAGATCAATGGCTAAGATTGCTATTGGTTGCCAAAAGCTCCGGGA
AGTTGACATAAGCTACTGTCACGAAATCTCCAACATATCTTTGGCGTTGATTGGCAAGCATTGTCCGAATATCAAGACTCTAAAACGAAACTTTTTTAATAATCTAGATC
CTTCCCAACATATGGGAATTGTCCCTAACAGTTATCTAAATGCTTGCCCTCAAGATGTGGATTCAGAAGCTGCGGCTATTGCAAAATTCATGCCCAACTTGGAGCACCTT
GAACTCTGTTTCTCTAAACTATCTGCTAAAGCTCTTAGTTTGATCTGTGAAGGATGTCCAAACCTTAAATACTTGGATCTGTTTGGATGTGTGAACTTGACAAGCCGTGA
TATAGTGAATGCTACATCAAGTTTGGAGAATTTGGAGATTAGGAAACCGAATTTCTACATTCCGAGGTCGGTCTTTCACTCGGAGAGATATGGCCATTGGAGGTTGTATG
ATGAGAGATTCCAAACAGATATTTTCCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATTCCCACACCAAATAACCGTATTATCGCCACTCAACTCTCTTACCAACTCCGATCCAATCTCTCCCTCATAAATTTAATTCAGTCCTCCTCCACCTCATCTCTTTCAAT
ATTCCTAATTTCCTAAACACCCAATAAATGGCAGAGCCGTCGTCGGAATCATCGCCGGCATGGGCCGAGCTGACGCACGAGTGCCTAACCAACGTCCTCTCTCGGCTCAC
CATCGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACCGACCCCTCGCTCCACTCCCAGTTCGACCTCGAACCCAGGTTCGACTCGG
CCCCCACCGAGTCGCCGGCCTGGTGGTCACCCCAGTTCGAGACCAAGATTGATTCCATGCTTCGATCTGTCGTCCATTGGAGCCTTGGTTCTCTCTCCCTTATTCGGATC
AGACACTGCTCCGATTCATCTCTCGATTGTGTCGCTGAAAGGTGCCCAAATCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACTGATAGATCAATGGCTAAGAT
TGCTATTGGTTGCCAAAAGCTCCGGGAAGTTGACATAAGCTACTGTCACGAAATCTCCAACATATCTTTGGCGTTGATTGGCAAGCATTGTCCGAATATCAAGACTCTAA
AACGAAACTTTTTTAATAATCTAGATCCTTCCCAACATATGGGAATTGTCCCTAACAGTTATCTAAATGCTTGCCCTCAAGATGTGGATTCAGAAGCTGCGGCTATTGCA
AAATTCATGCCCAACTTGGAGCACCTTGAACTCTGTTTCTCTAAACTATCTGCTAAAGCTCTTAGTTTGATCTGTGAAGGATGTCCAAACCTTAAATACTTGGATCTGTT
TGGATGTGTGAACTTGACAAGCCGTGATATAGTGAATGCTACATCAAGTTTGGAGAATTTGGAGATTAGGAAACCGAATTTCTACATTCCGAGGTCGGTCTTTCACTCGG
AGAGATATGGCCATTGGAGGTTGTATGATGAGAGATTCCAAACAGATATTTTCCGAATTTGATGGAAATGCTCTCCTAATACTATATGTATCACTGCACTTAAAAACCTA
GATCATTTGTTGAAGATCAGTGTTGTTTTTCTAAGTTGTACAGTTCTTAATTTACCTGTTCTGCTTCATGACAGTCATAAATCTTTTACTTTCTTTTGAACTTGTATGGT
GGATTGATGTGGCACAAGGTTTGTATAACTTTTAATTAACAGCATATGCGTTTTAGTTATAACTTGTTTCCAAGCTTGTGGGATCCTTTTTTTCTTTATTCTTCTGAACC
TCTTAT
Protein sequenceShow/hide protein sequence
MAEPSSESSPAWAELTHECLTNVLSRLTIEQRWRGPMLVCKLWFRAATDPSLHSQFDLEPRFDSAPTESPAWWSPQFETKIDSMLRSVVHWSLGSLSLIRIRHCSDSSLD
CVAERCPNLEVLSIKSCPNVTDRSMAKIAIGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHMGIVPNSYLNACPQDVDSEAAAIAKFMPNLEHL
ELCFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHSERYGHWRLYDERFQTDIFRI